| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,374,783 | C→G | 10.2% | intergenic (+268/+24) | PP_2970 → / ← PP_2971 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,374,783 | 0 | C | G | 10.2% | 869.0 / 28.6 | 315 | intergenic (+268/+24) | PP_2970/PP_2971 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base C (163/113); new base G (2/35); total (166/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.69e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 332 total aligned reads displayed.
GTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3374634‑3374931 | ttgttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cg > 1:931103/1‑150 (MQ=255) gttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTTAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggc < 1:4318244/150‑1 (MQ=255) gttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggc < 1:5877320/150‑1 (MQ=255) tttATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCAGGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggcg > 2:6894717/1‑150 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc < 1:4947610/150‑1 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc > 2:5692995/1‑150 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc < 1:2806263/150‑1 (MQ=255) gggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCg > 1:3681834/1‑150 (MQ=255) gggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCGCTGCAG‑CGGCGATTCg > 2:7356924/1‑150 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg > 1:7497856/1‑150 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg < 1:3814188/150‑1 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCAACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg < 2:4857813/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc > 2:4976605/1‑150 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc > 2:1175055/1‑150 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc > 1:6618524/1‑150 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGcc < 1:7368947/150‑1 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGcc > 2:3076788/1‑150 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTGCCGAATCG‑CCGCTGCAGAGGGCGATTCggaa < 1:1436562/150‑3 (MQ=255) ccTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCa > 1:3168973/1‑150 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCTAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc < 1:1812150/150‑1 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:4466374/1‑150 (MQ=255) cTCGAATAACGCGAGGTCTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:7069866/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:7036908/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 2:6029326/1‑150 (MQ=255) aTAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCgg > 1:6741308/1‑150 (MQ=255) tAACGCGTGTTTTTCTGTTAATCCGACCGCAAATTGTTGGCCATGATCGAATTCGGTTCTATTTCTGCGGCGAATCACCGCTTTCTGGGGGGTGTCGCCCCTTTTTTCTTCCTAATCGCCCTCTGCAG‑GGGCTTTTCGGCCCACTCCggg < 2:2206288/150‑1 (MQ=255) gcgAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTc > 1:8321750/1‑150 (MQ=255) gAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAg > 1:5238309/1‑150 (MQ=255) tttCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGc < 2:6664664/150‑1 (MQ=255) ttCAGTGAATCCGCCCGCCAAATGATGGCCATGATCGAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGcc < 2:6109318/150‑1 (MQ=255) cAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCGGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCtt < 2:9024836/150‑1 (MQ=255) tgttaaTCCTACCGCAAAATGTTGGCCTTTATCTATTTGGTTTCGTTTGCGGCGGCGAATCACCGTTTTCGGGGCGGTGCCGCCCCTTTTTCCTCCCTAACCGCCCTCTGCAG‑CGGCGATTGGCCCCACTCCGGGCGTCAGAAGGCCTTg < 2:230943/146‑1 (MQ=255) tgTGAATCCGACCGCAAAATTTTGGCCATGATCGATTTGGGTTCGTTTTCTGCGGCTAATCACCGCTTTCTGGGGGTTGTCGCCCCGTTTTTCTTCCTAATCGCCCTCTGCTG‑CGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTg < 2:7634079/149‑1 (MQ=255) aGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTg > 2:3692012/1‑150 (MQ=255) tttaaTCCCCCCCCCAAATGTTGCCCATGATCGAATTGGGTTCGATTTCTGCGGCTAATCACCGCTTTCTGGGCGGTGTCCCCCCGTTTTTCTTCCTAATCGCCCTCTGCAG‑GGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGa < 2:8488732/147‑1 (MQ=255) gTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGa > 1:358501/1‑150 (MQ=255) tGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGAt > 2:8747790/1‑150 (MQ=255) tCCGACCGCAAAATGTTGGCCATGATCTAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTccc < 2:2762084/150‑1 (MQ=255) gACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGcc > 1:1064582/1‑150 (MQ=255) cGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTc > 1:6127138/1‑150 (MQ=255) caaaaTGATGGCCATCATCTAATGCGGTTCGATTTCTGCGGCGAATCACCGCTTTCGGGGCGGTGTCGCCCCGTTTTTCTTCCGATTCGCCCTCTGCAG‑CGGCTATTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTg < 2:5556471/148‑1 (MQ=255) attgatgGCCATGATCGAATTCGGTGCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:8050709/148‑1 (MQ=255) aaTGTTGGCCTTGATGTATTTCGGTTGGTTTTCTGCGGCTAATCACCGCTTTGTGGGGGGTGGCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑GGGGGATTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:6436947/150‑1 (MQ=255) aaTGCTGGCCTTGATCTATTTCGGTTCGATTTCTGCGGCTAACCACGGCTTTGGGGGCGGTGTCGCCCCGTTTTACTTCCGAATCGCCCTCTGAAG‑CGGCTTTTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:8539341/150‑1 (MQ=255) aaTGATGGCCATGATCTAATTGGGTTCTTTTTCTGCGGCGAATCACCGCTTTGTGGGGGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCGCTGCAG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:2650625/150‑1 (MQ=255) aaTGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGGGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:2893177/150‑1 (MQ=255) aaTGAGGGCCATGATCGAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCTTTTTTCTCCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:8219248/150‑1 (MQ=255) ttttgGCCTTTATCTAATTGGGTTCTATTTCTGCGGCGAATCACCGCTTTCTGGGGGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCCCTGCCG‑CGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGt < 2:4184792/147‑1 (MQ=255) gatgGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTa > 2:5228243/1‑150 (MQ=255) gCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACAcc > 1:8522476/1‑150 (MQ=255) cATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cg < 2:5518085/89‑1 (MQ=255) cATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cg > 1:5518085/1‑89 (MQ=255) tGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGcc > 1:5754209/1‑150 (MQ=255) cGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCtt > 2:8874192/1‑150 (MQ=255) gAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTACTGGAAGTACACCAGCCGCTTc > 2:562275/1‑150 (MQ=255) tttgggTTCTTTTTCGGGGGCTAATCCCCGCTTTGTGGGGGGTGTCGCCCGTTTTTTCTCCCGAAGCGCCCTGTGCCG‑GGGCTTTTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCaa < 1:534633/146‑1 (MQ=255) ctgcGGTTCGTTTTCTGCGGCGACTCACCGGTTTGTGGGCGGTGGCGCCCCGTTTTTCTGCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCaa < 2:7511795/147‑1 (MQ=255) ggTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCGCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTg < 2:5047262/150‑1 (MQ=255) ggTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTg > 2:6268353/1‑150 (MQ=255) ttCGTTTTCTGCGGCGAAGCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa < 2:7340654/150‑1 (MQ=255) ttCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa > 1:6371461/1‑150 (MQ=255) tttgttGCGGGTAATCCCGGGTTTGTGGGGGGTGGCGCCCGTTTTTTCTTCCGAACCCCCCAGGGCTG‑CGGCGATCCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAg < 1:1546714/145‑1 (MQ=255) gcggcgAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGgccgcc > 1:2684230/1‑150 (MQ=255) gAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTTGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatcat > 2:4319315/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:6260923/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:7323242/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:7763414/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 2:8321499/1‑150 (MQ=255) tCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgt > 1:8951994/1‑150 (MQ=255) aCCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtca > 1:8788812/1‑150 (MQ=255) aCCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtca > 2:1894704/1‑150 (MQ=255) cGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcatc > 2:1490786/1‑150 (MQ=255) cTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGc > 2:2270013/1‑150 (MQ=255) tCTGCGCGGTGTCGCCCCGTTTTTCTACCCAAACCCCCTCTCCAG‑CGCCCATACGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCaaa < 2:8573847/150‑1 (MQ=255) cGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTcgc < 2:3776172/150‑1 (MQ=255) cGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTcgc < 2:5754209/150‑1 (MQ=255) cGCCCTTTTTTTCTTCCTAATCGCCCTCTGCAG‑CGGCTTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGccc < 1:4347715/150‑1 (MQ=255) cGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGccc < 1:6044748/150‑1 (MQ=255) cGCCCCGTTTTTCTTCCGAATCGCCCTCTGCTG‑GGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGccc < 1:615415/150‑1 (MQ=255) gCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGcccc > 1:1372704/1‑150 (MQ=255) gCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGcccc > 2:1285678/1‑150 (MQ=255) ccccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGcccca > 1:2314399/1‑149 (MQ=255) cccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGTAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTAGCGCGCCCCTg > 2:7382705/1‑150 (MQ=255) cccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTg > 2:1737264/1‑150 (MQ=255) cccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTg > 1:4107430/1‑150 (MQ=255) ccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGt > 1:8263088/1‑150 (MQ=255) ttcCTACTCGCCCTCTGCCG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa < 1:2596480/150‑1 (MQ=255) ttcCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa > 1:2057508/1‑150 (MQ=255) cctaagcGCCCGCGGCCG‑CGGCGAGGCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACg < 1:4815318/144‑1 (MQ=255) ccGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGt < 2:5899324/95‑1 (MQ=255) cGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:3490305/1‑150 (MQ=255) cGAATCG‑CCGCTGCAGAGGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACgg > 2:3599303/1‑150 (MQ=255) gAATCGCCCTCTGCAG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGa < 2:1532486/150‑1 (MQ=255) gAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGa > 2:4667155/1‑150 (MQ=255) gAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGa < 1:7362883/150‑1 (MQ=255) cGCCCTCTGCAG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATTGTACGGATCaa < 2:7840601/150‑1 (MQ=255) ctGCAG‑CGGCGATTCGGTCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgcc < 2:1970986/150‑1 (MQ=255) ctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgcc < 2:1027051/150‑1 (MQ=255) gctg‑cggcgATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgccgc < 1:9138433/147‑1 (MQ=255) aG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGccc < 1:9042814/150‑1 (MQ=255) | GTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3374634‑3374931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |