| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,468,806 | T→G | 21.1% | intergenic (‑16/+108) | PP_3081 ← / ← PP_5560 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,468,806 | 0 | T | G | 21.1% | 417.2 / 41.8 | 212 | intergenic (‑16/+108) | PP_3081/PP_5560 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (28/128); new base G (37/9); total (75/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.52e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3468657‑3468955 | cgcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCt < 1:2665435/150‑1 (MQ=255) cgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgc < 2:3834250/150‑1 (MQ=255) tACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCcggcgg > 2:7020094/1‑150 (MQ=255) tACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcgg > 2:7625094/1‑150 (MQ=255) tACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcgg > 2:4005701/1‑150 (MQ=255) aCCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcggc < 2:4832993/150‑1 (MQ=255) cTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGcggcgg < 1:7505674/150‑1 (MQ=255) cTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGcggcgg < 2:2867166/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCggcggcggc > 2:8780306/1‑150 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 1:2494242/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCaa < 1:1836581/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCCGCGGCGGccca > 1:7730038/1‑148 (MQ=255) ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACTTCGCGCCTTGGCCGCCGCAGGCGGCCaag < 1:8196697/150‑2 (MQ=255) ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAAc < 1:595658/150‑1 (MQ=255) ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaag < 2:4325755/150‑2 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACg < 1:3849597/150‑1 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACg < 1:1583828/150‑1 (MQ=255) aGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCt < 2:496890/150‑1 (MQ=255) ggTTTTCCCAGCTATGTTGGGGGGTCCGATCTTCACCGGCACGGCATGCGGGGTCCTGGCCTACCTTTTGCTGGGAATTGACGCCGCAATAT‑TTTAAAGACGTGCAAAAGACCTAAATCGCGCCTTGGCCGCCTGCGGCGGCCAAGGcgc < 2:7710374/150‑3 (MQ=255) gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCAGCGGCGGCCAAcccggt > 1:5757445/1‑145 (MQ=255) gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCtgt > 2:6852054/1‑150 (MQ=255) gTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGACCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCTGCGCCGGCCAACGCAGAGCa > 2:1030151/1‑150 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg < 2:2738096/150‑1 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg < 2:6827589/150‑1 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCAGTGCAg > 1:4224547/1‑150 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCCACCCGGTGCAg > 1:7372185/1‑150 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTATTCACCGGCACCGAATGCCGGGTCCTGGCCGACCTTTTGCTGGGAAATGACGCCGCCATAA‑GTTAAATACTAGTAACTCACCCACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg < 1:8087854/150‑1 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCCGCGGCGGCCCACCCCGTGGAggg > 1:1673092/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACGCGGTGCAggg > 1:8848124/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGgc > 2:2366300/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCCACCCGGTGCAGGgc > 2:2366440/1‑150 (MQ=255) gCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCAATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgcag < 2:2129534/150‑1 (MQ=255) gggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACGTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACGGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 2:5621689/149‑1 (MQ=255) ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCAATCA‑GTGAAAGACGAGGAACTGACCGACCTCGCGCCTTGGCGGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCg < 2:138574/150‑1 (MQ=255) tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCTGGGCAATGACGCCGCCATAA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACa < 1:5271053/150‑1 (MQ=255) tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGAAGCCATCA‑GAGAAAGACTAGGAACAGACCGACATCGCGCCTTGGCAGCCTGCGGAGGCAAAAGCAGTGAATGGCAGCAAAGCAGCGAACa > 2:1358151/1‑150 (MQ=255) ccGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAg < 2:7337135/150‑1 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGTACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCAGTGCCGGGCAGCAAAGCAGCGAACAGc > 1:1504097/1‑150 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGGGCCGGCGGCGGCCAACGCGGGGGCGGGGCGCCCAGCAGCGGACAGc > 1:6438166/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGGCAGCAAACCAGCGAACAccc > 1:2200945/1‑150 (MQ=255) aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCAGCGAACACCCAGAGTCt > 2:8835566/1‑150 (MQ=255) aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa < 1:2399743/111‑1 (MQ=255) cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACCCGGTGGAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa > 2:1302451/1‑150 (MQ=255) ggCACCGCTTGCCGGGTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:126900/150‑1 (MQ=255) ggCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCTTCA‑GTGAAAGAGGCGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:4249290/150‑1 (MQ=255) ggCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:6814390/150‑1 (MQ=255) ccACCGCATCCCGGGTCCTGGCCCACCTGTTGCAGGCAAATCACGCCGCCAACA‑GTCAAAGACGAGCAACTCACCGACATCGCCCCTTGCCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAgg < 2:5808976/149‑1 (MQ=255) cggctggCCGGGTCGTGGCCGCCCTGTTGATGGGAATTGACGCC‑CCATTATTTTAAAGACTCGTAACGGCCCCACTTCGCGCCTGGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGc < 1:4597724/144‑1 (MQ=255) cGCTTGCCGGGTCCTGGCCGACCTGTTGCTGGGCATTGACGCCGCAATAT‑TTGAACGCCGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCa < 1:1365119/150‑1 (MQ=255) cttGCCGGGTCCGGGCCGACCTGTTGCTGGGAATTGACGCCGCCATCT‑GTGAAAGACGAGGAACGGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATg < 1:8003579/148‑1 (MQ=255) cATGCCGGGTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCT‑GTGAAAGACGAGGAACTGACCTACATCGCGCCTTGGCCGCCTGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGGGAGTGTCTGAGGTGCATg < 1:6031747/150‑1 (MQ=255) cATGCCGGGTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATg < 2:686173/150‑1 (MQ=255) tGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCGGCGGCGGCCAACCCAGTGGCGGGCAGCAAAGCACCGAACACCCACGTTCTGTGGTGGATGGt > 1:1914489/1‑150 (MQ=255) ggTCCTGGCCGACCTGTTGCAGGGCATTGACGCCGCCATCA‑GTGAAAGACGAGTAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATc < 1:6194316/150‑1 (MQ=255) tCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt < 1:2083522/150‑1 (MQ=255) tCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt > 2:6685166/1‑150 (MQ=255) tCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTAGGCCCCCAGGGGCGGCCAACGCAGTGCCAGGGACCCAAGAACCGAAAACCCACTGTATGAGGTGCAATGTCaaaaca > 2:1112792/1‑146 (MQ=255) ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 2:4713128/150‑1 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACCCTGGGCAGGGCCGCAAAGCAGCCGACCGCCCCGGTCTGAGGTGCCTGGGCAAAACTTgg > 2:3131170/1‑150 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCAGTGCAGGGCAGCAAAGCACCGAACAGCCAATGTCTGAGGTGCATGGTCAAtacattg > 1:5227933/1‑144 (MQ=255) ccGACCTGTTGCAGGGCAATGACGCCGCCATCT‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAg < 2:5750862/150‑1 (MQ=255) gACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAggg < 2:655922/150‑1 (MQ=255) gACCTGTTGCAGGGAATTGACGCCGCAATCA‑TTTAAAGACGAGTAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAggg < 1:8838360/150‑1 (MQ=255) aCCTGTTGGAGGGCAATGACGCCGCCATCA‑TTTTAAGACGAGGAACTGACGGACTTCGCGCTTTGGCCGCCTGCGGCGGCCATCGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGc < 1:9150013/150‑1 (MQ=255) aCCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGc < 1:9150087/150‑1 (MQ=255) gTTGCAGGGCACTGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCa < 2:7871334/150‑1 (MQ=255) tGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACAGCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACg < 1:7982706/150‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACgg > 2:5185795/1‑150 (MQ=255) cAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATACTTGGCAGGGCGTCACGGc > 2:8338373/1‑150 (MQ=255) cAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGt < 2:5252791/150‑1 (MQ=255) tGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGGCAACCCTGTGCAGGGCACCAAAACAGCGAACAGCCACGGTCTGGGGTGGATGGGCCAAACATGGCAGGGCGGCACGGCTCAGTCTa > 2:2427815/1‑150 (MQ=255) gACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAg < 1:7601606/150‑1 (MQ=255) gccgccATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCAACGCAGTGCAGGGCCGCAAACCAGCCAACACCCCGTGTCTGAGGTGCATGGTCAAACCGAGGCACGGCGTCACGGCGAAGTCTAGccc > 2:7957487/1‑150 (MQ=255) ccctCA‑GTGCAAGACGAGTAACTGACCGACCTCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGt < 1:7885314/147‑1 (MQ=255) ccATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCGGCGGCGGCCCACGCTGTGCCGGGCCGCAAAGCAGCGAACAGCCCCGGTCTGAGGTGCCTGGTCAATCCGGGGCCGGGCGGCACCGCGCAGTCTAGCCCACGt > 2:6310159/1‑150 (MQ=255) cATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTc < 2:2523872/150‑1 (MQ=255) cA‑GTTAAAGACGTGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGc < 1:3468139/150‑1 (MQ=255) ctgTGAAAGCCGCGGAACTGACCGACCTCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGc < 1:483673/148‑1 (MQ=255) tGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGTGGAGGGCCCCAAAGCAGCCAACACCCCGGGGCGGAGGTGGCTGGGCAAACCTTGGCCGGGCGGCACGGCTCAGTCTAGCCCACGGCTGCtta > 2:75905/1‑149 (MQ=255) aaGACGTGGAACTGACCGACATCGCGCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGc < 1:7020094/150‑1 (MQ=255) aaGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGc < 1:4006107/150‑1 (MQ=255) gACGAGGAACTGACCGACATCGCGCCTTGGCCCCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAACAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAAACATTGCAGGGCGTCACGGCACAGTCAAGCCCAGGTCTGCTTAAGCgg > 1:9096125/1‑150 (MQ=255) gAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGGAGGGCAGCAAAGCCCCGAACAGCCCCTGTCTGGGGTGCAGGGTCAATCCGTGGCCGGGCGTCACCGCGCAGTCTAGCCCCGGTCTGCTTCAGCGGcgg > 2:1885265/1‑148 (MQ=255) aGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGt > 2:6092041/1‑150 (MQ=255) aCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 2:6624902/150‑1 (MQ=255) aCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 1:1179394/150‑1 (MQ=255) aCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 1:8638688/150‑1 (MQ=255) aCCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGTGCAGGGCCGCAAAGCAGCGCACAGCCCGGGTGTGAGGTGGCTGGGCAATCCATGGCCGGGCGGCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCGGTCCAGGTcc > 2:3564864/1‑150 (MQ=255) aCCGACATCGCGCCTTGGCCCCCGGCGGCGGCCAACCCGGTGCAGGGCACCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCAAGGTCAATACATGGCAGGGCGTCACGGCGCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCAGGTcc > 2:4376925/1‑150 (MQ=255) aTCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAACGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 2:1504097/150‑1 (MQ=255) aTCGCGCCTGGCCCGCGTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 1:2366304/150‑1 (MQ=255) gttGGCCGCCGCAGGCGGCCAAGGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc > 1:3378321/2‑150 (MQ=255) cTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc > 2:4916596/1‑150 (MQ=255) ttGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc > 1:866247/1‑150 (MQ=255) ggCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGc > 2:7446629/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg > 1:8573937/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg < 1:6852054/150‑1 (MQ=255) tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTcc < 2:3234801/150‑1 (MQ=255) tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTcc < 1:532754/150‑1 (MQ=255) tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTcc < 1:8780306/150‑1 (MQ=255) | CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCA‑GTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3468657‑3468955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |