BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,595,232	T→A	5.4%	R101R (CGT→CGA)	PP_3171 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,595,232	0	T	A	5.4%	950.0 / 28.3	286	R101R (CGT→CGA)	PP_3171	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (155/112); new base A (8/8); total (165/121)
Fisher's exact test for biased strand distribution p-value = 6.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 291 total aligned reads displayed.

GGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGT  >  NC_002947/3595083‑3595381

 gCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTa                                                                                                                                                      >  1:3285091/1‑150 (MQ=255)

     ggCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGa                                                                                                                                                  >  1:3506416/1‑150 (MQ=255)

        ggCCACGTCGCTGGGGATCAACGAAATCGCCAACGCCACCCGACCCAGTCGGGTGGGTGCTGGCGGTATCCTGCTGCCCAACCATGCGCCGTGGGTGGAGGCCGAACAGTTTGGCACCCTCAAGACAGAGCACCCAGGTCGGATCGAccg                                                                                                                                               >  2:4559207/2‑149 (MQ=255)

          ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgg                                                                                                                                             <  1:55722/150‑1 (MQ=255)

          ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgg                                                                                                                                             <  1:813734/150‑1 (MQ=255)

          ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctgg                                                                                                                                             <  1:186846/150‑1 (MQ=255)

          ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctgg                                                                                                                                             <  1:9123931/150‑1 (MQ=255)

           cACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctggg                                                                                                                                            <  2:21722/150‑1 (MQ=255)

           cACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctggg                                                                                                                                            <  1:6371433/150‑1 (MQ=255)

             cGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgggcc                                                                                                                                          <  2:3064481/150‑1 (MQ=255)

              gTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgggcct                                                                                                                                         <  1:7422761/150‑1 (MQ=255)

                  cTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACctgggcctgggc                                                                                                                                     <  2:7741891/150‑1 (MQ=255)

                   tGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCtgggcctgggcc                                                                                                                                    >  2:8581063/1‑150 (MQ=255)

                       gATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTgc                                                                                                                                >  1:400226/1‑150 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            <  1:4988277/150‑1 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            >  1:121439/1‑150 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            >  2:1472631/1‑150 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            <  2:3960533/150‑1 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            >  2:4350562/1‑150 (MQ=255)

                           aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                            >  1:764191/1‑150 (MQ=255)

                            aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                           >  2:7360261/1‑150 (MQ=255)

                            aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                           >  1:1432226/1‑150 (MQ=255)

                             cGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAgg                                                                                                                          <  1:6665888/150‑1 (MQ=255)

                              gAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGc                                                                                                                         <  2:538241/150‑1 (MQ=255)

                               aaaTCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCa                                                                                                                        >  2:5825948/1‑150 (MQ=255)

                                  tCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGt                                                                                                                     >  1:2502748/1‑150 (MQ=255)

                                  tCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGACCGAACAGTTTGGAAAACTCAATACATTGCACCCAGGTCGTATCCACCTGGGCCTGGGCCGTGCGCCAGGCACgg                                                                                                                     >  1:7859673/1‑149 (MQ=255)

                                   cGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCACTACAGTGCACCCAGGTCGGATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTc                                                                                                                    >  2:7243534/1‑150 (MQ=255)

                                    gCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTcc                                                                                                                   >  2:3235959/1‑150 (MQ=255)

                                      cAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCgg                                                                                                                 <  2:1658324/150‑1 (MQ=255)

                                       aaCGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCggg                                                                                                                >  1:4547794/1‑150 (MQ=255)

                                         cGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGcc                                                                                                              >  2:4933875/1‑150 (MQ=255)

                                            cACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGAc                                                                                                           >  1:5652447/1‑150 (MQ=255)

                                                cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                       >  2:3525818/1‑150 (MQ=255)

                                                cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                       <  2:5086400/150‑1 (MQ=255)

                                                cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                       <  2:8504990/150‑1 (MQ=255)

                                                cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                       <  1:8756992/150‑1 (MQ=255)

                                                cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                       >  1:390938/1‑150 (MQ=255)

                                                   cacaTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCgg                                                                                                    <  1:8071833/150‑1 (MQ=255)

                                                   cacaTTCGTGTGGGTGCGGGCGGTATCATGCTGCCCAACCATGCGCCGTGGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCgg                                                                                                    <  1:6148345/150‑1 (MQ=255)

                                                    acaTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCggg                                                                                                   >  2:8415269/1‑150 (MQ=255)

                                                      aTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCa                                                                                                 >  2:826525/1‑150 (MQ=255)

                                                        tCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAtt                                                                                               <  2:9029008/150‑1 (MQ=255)

                                                        tCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAtt                                                                                               >  2:2924618/1‑150 (MQ=255)

                                                        tCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAtt                                                                                               <  2:6962426/150‑1 (MQ=255)

                                                          gtgtGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTgc                                                                                             >  1:460249/1‑150 (MQ=255)

                                                          gtgtGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTgc                                                                                             >  1:4150425/1‑150 (MQ=255)

                                                            gtgGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAGTgcgc                                                                                           >  1:5751043/1‑150 (MQ=255)

                                                               ggTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCgcggc                                                                                        >  1:6485897/1‑150 (MQ=255)

                                                                    tGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgc                                                                                   >  2:5519585/1‑150 (MQ=255)

                                                                    tGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgc                                                                                   >  2:7929936/1‑150 (MQ=255)

                                                                         gTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCTCCGCGCCag                                                                              <  1:4933875/150‑1 (MQ=255)

                                                                         gTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCag                                                                              >  1:2845396/1‑150 (MQ=255)

                                                                          tATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                             <  1:2753834/150‑1 (MQ=255)

                                                                          tATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATGGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                             <  2:4852784/150‑1 (MQ=255)

                                                                              aTGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCgg                                                                         <  1:1620314/150‑1 (MQ=255)

                                                                                  tgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGAtt                                                                     >  1:7961026/1‑150 (MQ=255)

                                                                                    cccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGACCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGCTTTc                                                                   >  1:824283/1‑150 (MQ=255)

                                                                                     ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCTGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                  <  1:773542/150‑1 (MQ=255)

                                                                                     ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                  >  1:8919283/1‑150 (MQ=255)

                                                                                        aCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGcc                                                               <  1:691634/150‑1 (MQ=255)

                                                                                              cgcCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACa                                                         >  1:5488133/1‑150 (MQ=255)

                                                                                               gcCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGGTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACAt                                                        >  2:2628401/1‑150 (MQ=255)

                                                                                                   ttGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                    <  2:6030071/150‑1 (MQ=255)

                                                                                                   ttGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                    <  1:4309954/150‑1 (MQ=255)

                                                                                                   gtggtggtggCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                    <  2:9046394/149‑1 (MQ=255)

                                                                                                     ggtcgtcgCCGAACACTTAGGCACCCTCAATACAGTGCACCCAGGTCGTCTCGACCTGGGCCTGGCCCGTGCGCCAGGCACGTCCGGGCCGACCGTGCGGGGCGTGCGCGGCGCCGCGCCAGAGCGGGCTGTCGGCCCGGCCAGCGCCgc                                                  >  2:6709993/1‑149 (MQ=255)

                                                                                                      gtggtggTCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAg                                                 >  1:2088175/1‑150 (MQ=255)

                                                                                                        ggtggCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCt                                               >  1:7058521/1‑150 (MQ=255)

                                                                                                          gggCCGAACAGTTTGGCACCCTCAATACCTTGCCCCCAGGTCGGACCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGc                                             <  1:2250109/149‑1 (MQ=255)

                                                                                                              cGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                         <  1:3854184/150‑1 (MQ=255)

                                                                                                               gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                        >  2:468761/1‑150 (MQ=255)

                                                                                                               gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                        >  1:3086976/1‑150 (MQ=255)

                                                                                                                aaCAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAtt                                       >  2:5752530/1‑150 (MQ=255)

                                                                                                                     tttGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTg                                  >  1:2928463/1‑150 (MQ=255)

                                                                                                                       tGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGc                                <  2:8808798/150‑1 (MQ=255)

                                                                                                                           aCCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGAc                            <  2:1736033/150‑1 (MQ=255)

                                                                                                                              cTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAAc                         >  2:6880454/1‑150 (MQ=255)

                                                                                                                               tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                         >  1:5553596/1‑133 (MQ=255)

                                                                                                                               tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACg                        <  2:5953185/150‑1 (MQ=255)

                                                                                                                                 aaTACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGc                      >  1:1687965/1‑150 (MQ=255)

                                                                                                                                   tACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCaa                    <  1:3570924/150‑1 (MQ=255)

                                                                                                                                    aCATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCaaa                   <  2:1295058/150‑1 (MQ=255)

                                                                                                                                       ttGCACCCAGGTCGTATCTACATGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGAGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCAGCGTGATAACCTGGCCGACAACGGCAAACGc                >  2:6132710/1‑150 (MQ=255)

                                                                                                                                       ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                >  1:7144544/1‑150 (MQ=255)

                                                                                                                                       ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                >  1:9119278/1‑150 (MQ=255)

                                                                                                                                       ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                >  1:4517362/1‑150 (MQ=255)

                                                                                                                                        tGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGcc               >  1:7092109/1‑150 (MQ=255)

                                                                                                                                          cACCCTGGTCGTATCGACGTGGGCCTGGGCCGTGCGCCAGGCCCGTCGGGGCCGACCGTTGGGGCTTTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg             <  1:17829/150‑1 (MQ=255)

                                                                                                                                          cACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg             <  1:3757212/150‑1 (MQ=255)

                                                                                                                                             ccAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTg          >  2:7670614/1‑150 (MQ=255)

                                                                                                                                             ccAGGTCGATACGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTg          >  2:4467786/1‑150 (MQ=255)

                                                                                                                                               aGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTgcg        >  2:5254897/1‑150 (MQ=255)

                                                                                                                                                  tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg     >  1:9021365/1‑150 (MQ=255)

                                                                                                                                                  tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg     >  2:8984233/1‑150 (MQ=255)

                                                                                                                                                  tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg     >  1:530474/1‑150 (MQ=255)

                                                                                                                                                  tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCCGGTGCgcgg     >  1:6197524/1‑150 (MQ=255)

                                                                                                                                                   cGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcggc    <  2:8002620/150‑1 (MQ=255)

                                                                                                                                                     tATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGt  >  2:7200609/1‑150 (MQ=255)

                                                                                                                                                     tATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGCGCACCCGGCGt  <  2:557628/150‑1 (MQ=255)

GGCTCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGT  >  NC_002947/3595083‑3595381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`