BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,595,234	T→A	5.1%	I102N (ATC→AAC) ‡	PP_3171 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,595,234	0	T	A	5.1%	988.4 / 25.1	292	I102N (ATC→AAC) ‡	PP_3171	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (164/111); new base A (7/8); total (171/121)
Fisher's exact test for biased strand distribution p-value = 4.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 294 total aligned reads displayed.

TCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTAC  >  NC_002947/3595086‑3595383

       ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgg                                                                                                                                               <  1:55722/150‑1 (MQ=255)

       ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctgg                                                                                                                                               <  1:186846/150‑1 (MQ=255)

       ccACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctgg                                                                                                                                               <  1:3107762/150‑1 (MQ=255)

        cACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctggg                                                                                                                                              <  1:6371027/150‑1 (MQ=255)

         aCGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGATACGAcctgggt                                                                                                                                             <  1:9070786/150‑2 (MQ=255)

              gCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGAcctgggcctggg                                                                                                                                        <  2:5043042/150‑1 (MQ=255)

               cTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACctgggcctgggc                                                                                                                                       <  2:7741891/150‑1 (MQ=255)

                tGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCtgggcctgggcc                                                                                                                                      >  2:8581063/1‑150 (MQ=255)

                tGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCtgggcctgggcc                                                                                                                                      >  2:7342444/1‑150 (MQ=255)

                tGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCtgggcctgggcc                                                                                                                                      >  1:5713648/1‑150 (MQ=255)

                    gATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTgc                                                                                                                                  >  1:8135967/1‑150 (MQ=255)

                       cAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGcc                                                                                                                               >  1:6682097/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  2:1472631/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  2:4350562/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              <  1:4988277/150‑1 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  1:3902641/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              <  1:3745343/150‑1 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              <  1:5995758/150‑1 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  1:121439/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  1:8002620/1‑150 (MQ=255)

                        aaCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTGGGTGGTGGCCGAACAGTTTGGCACCCTCAATACCTTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCa                                                                                                                              >  2:2892518/1‑150 (MQ=255)

                         aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTgcgcacc                                                                                                                             >  2:1234945/1‑147 (MQ=255)

                         aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                             >  1:1432226/1‑150 (MQ=255)

                         aCGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGGATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACAGTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAg                                                                                                                             >  1:7125425/1‑150 (MQ=255)

                          cGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAgg                                                                                                                            <  2:5119264/150‑1 (MQ=255)

                           gAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGc                                                                                                                           >  2:5384109/1‑150 (MQ=255)

                            aaaTCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCa                                                                                                                          >  2:4627970/1‑150 (MQ=255)

                            aaaTCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCa                                                                                                                          >  2:5825948/1‑150 (MQ=255)

                               tCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGcccag                                                                                                                       <  1:6941616/150‑5 (MQ=255)

                               tCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGt                                                                                                                       >  1:2502748/1‑150 (MQ=255)

                                cGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGGTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTc                                                                                                                      >  2:7243483/1‑150 (MQ=255)

                                   cAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCgg                                                                                                                   <  2:1658324/150‑1 (MQ=255)

                                    aaCGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCggg                                                                                                                  >  1:4548299/1‑150 (MQ=255)

                                         cACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGAc                                                                                                             >  1:5652447/1‑150 (MQ=255)

                                         cACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGAc                                                                                                             >  1:6594370/1‑150 (MQ=255)

                                           cccGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCg                                                                                                           >  2:3454008/1‑150 (MQ=255)

                                             cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                         >  1:391309/1‑150 (MQ=255)

                                             cGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGtt                                                                                                         <  2:8504990/150‑1 (MQ=255)

                                                cacaTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCgg                                                                                                      <  1:6148489/150‑1 (MQ=255)

                                                 acaTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCggg                                                                                                     >  2:8415269/1‑150 (MQ=255)

                                                   aTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCa                                                                                                   >  1:7676141/1‑150 (MQ=255)

                                                   aTTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCa                                                                                                   >  2:826525/1‑150 (MQ=255)

                                                     tCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAtt                                                                                                 <  2:9029008/150‑1 (MQ=255)

                                                     gcGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCAtt                                                                                                 <  2:6962401/149‑1 (MQ=255)

                                                       gtgtGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTgc                                                                                               >  1:4150425/1‑150 (MQ=255)

                                                           gggTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCgcgg                                                                                           >  1:3843807/1‑150 (MQ=255)

                                                            ggTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCgcggc                                                                                          <  1:8708292/150‑1 (MQ=255)

                                                                 tGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgc                                                                                     >  2:7929936/1‑150 (MQ=255)

                                                                    cGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGGGGCCGAACAGTTTGGCACCCTCAATCCATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGgcgccgcgcc                                                                                  <  1:7283458/150‑1 (MQ=255)

                                                                      gTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCTCCGCGCCag                                                                                <  1:4933875/150‑1 (MQ=255)

                                                                      gTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCag                                                                                >  1:2845396/1‑150 (MQ=255)

                                                                       tATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                               <  1:2753834/150‑1 (MQ=255)

                                                                       gaTCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCACAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCaga                                                                               <  2:4853105/149‑1 (MQ=255)

                                                                           aTGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCgg                                                                           <  1:1620314/150‑1 (MQ=255)

                                                                           aTGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCgg                                                                           <  2:5336665/150‑1 (MQ=255)

                                                                            tgctgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCggg                                                                          >  1:348180/1‑150 (MQ=255)

                                                                             gctgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGa                                                                         <  1:7565737/150‑1 (MQ=255)

                                                                             gctgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGa                                                                         <  1:6443966/150‑1 (MQ=255)

                                                                               tgcCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGAtt                                                                       >  1:7960987/1‑150 (MQ=255)

                                                                                 cccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTc                                                                     >  2:1734166/1‑150 (MQ=255)

                                                                                  ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                    <  1:3566177/150‑1 (MQ=255)

                                                                                  ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                    >  2:3080268/1‑150 (MQ=255)

                                                                                  ccAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCg                                                                    >  2:3757212/1‑150 (MQ=255)

                                                                                     aCCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGcc                                                                 <  2:2963718/150‑1 (MQ=255)

                                                                                      ccATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCa                                                                <  1:8927455/150‑1 (MQ=255)

                                                                                           cgcCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACa                                                           >  1:5488133/1‑150 (MQ=255)

                                                                                                ttGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                      <  2:6030071/150‑1 (MQ=255)

                                                                                                ttGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                      <  1:4309954/150‑1 (MQ=255)

                                                                                                gtggtggtggCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGcc                                                      <  2:9046394/149‑1 (MQ=255)

                                                                                                  ggtcgtcgCCGAACACTTAGGCACCCTCAATACAGTGCACCCAGGTCGTCTCGACCTGGGCCTGGCCCGTGCGCCAGGCACGTCCGGGCCGACCGTGCGGGGCGTGCGCGGCGCCGCGCCAGAGCGGGCTGTCGGCCCGGCCAGCGCCgc                                                    >  2:6709993/1‑149 (MQ=255)

                                                                                                   gtggtggTCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAg                                                   >  1:2088175/1‑150 (MQ=255)

                                                                                                       gggCCGAACAGTTTGGCACCCTCAATACCTTGCCCCCAGGTCGGACCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGc                                               <  1:2250109/149‑1 (MQ=255)

                                                                                                            gAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGAt                                          >  2:468883/1‑150 (MQ=255)

                                                                                                                  tttGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGacaaccgc                                    >  2:572410/1‑143 (MQ=255)

                                                                                                                  tttGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTg                                    >  1:2928463/1‑150 (MQ=255)

                                                                                                                    tGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGc                                  <  2:8808798/150‑1 (MQ=255)

                                                                                                                       cACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGa                               >  2:220286/1‑150 (MQ=255)

                                                                                                                           cTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAAc                           >  2:4476596/1‑150 (MQ=255)

                                                                                                                           cTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAAc                           >  2:6880454/1‑150 (MQ=255)

                                                                                                                            tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                           >  1:5553596/1‑133 (MQ=255)

                                                                                                                            tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGa                                           <  2:5553596/133‑1 (MQ=255)

                                                                                                                            tCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACg                          <  2:5953185/150‑1 (MQ=255)

                                                                                                                              aaTACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGc                        >  1:1687965/1‑150 (MQ=255)

                                                                                                                              aaTACATTGCACCCAGGTCGTAGCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGc                        <  1:8895273/150‑1 (MQ=255)

                                                                                                                                    ttGCACCCAGGTCGTATCTACATGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGAGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCAGCGTGATAACCTGGCCGACAACGGCAAACGc                  >  2:6132710/1‑150 (MQ=255)

                                                                                                                                    ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                  >  1:9119290/1‑150 (MQ=255)

                                                                                                                                    ttGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGc                  >  1:4517362/1‑150 (MQ=255)

                                                                                                                                     tGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGcc                 >  1:7092102/1‑150 (MQ=255)

                                                                                                                                       cACCCTGGTCGTATCGACGTGGGCCTGGGCCGTGCGCCAGGCCCGTCGGGGCCGACCGTTGGGGCTTTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg               <  1:17829/150‑1 (MQ=255)

                                                                                                                                       cACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCgg               <  2:758976/150‑1 (MQ=255)

                                                                                                                                         cccAGGTCGATACGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGt             >  2:7172552/1‑150 (MQ=255)

                                                                                                                                               tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg       >  1:530474/1‑150 (MQ=255)

                                                                                                                                               tCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcgg       >  2:8984233/1‑150 (MQ=255)

                                                                                                                                                cGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCgcggc      <  2:8002620/150‑1 (MQ=255)

                                                                                                                                                 gTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCACACGCCGGGTGCgcggcg     >  1:8211767/1‑150 (MQ=255)

                                                                                                                                                   aTCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTa   >  1:4020625/1‑150 (MQ=255)

                                                                                                                                                   aTCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTa   >  1:4703439/1‑150 (MQ=255)

                                                                                                                                                   aTCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTa   >  2:1851744/1‑150 (MQ=255)

                                                                                                                                                   aTCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTa   >  1:7812103/1‑150 (MQ=255)

                                                                                                                                                    tCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGCGCACCCGGCGttt  <  2:4132294/150‑3 (MQ=255)

TCGGCTGCCACGTCGCTGGTGATCAACGAAATCGCCAACGCCACCCGACACATTCGTGTGGGTGCTGGCGGTATCATGCTGCCCAACCATGCGCCGTTGGTGGTGGCCGAACAGTTTGGCACCCTCAATACATTGCACCCAGGTCGTATCGACCTGGGCCTGGGCCGTGCGCCAGGCACGTCCGGGCCGACCGTTCGGGCATTGCGCGGCGCCGCGCCAGAGCGGGATTTCGGCCAGGACATCGCCGAGCTGCGTGATTACCTGGCCGACAACGGCAAACGCCGGGTGCGCGGCGTAC  >  NC_002947/3595086‑3595383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`