Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,764,912 A→T 6.2% I64F (ATC→TTC)  PP_3326 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,764,9120AT 6.2% 1142.2 / 40.7 350I64F (ATC→TTC) PP_3326hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (137/191);  new base T (15/7);  total (152/198)
Fisher's exact test for biased strand distribution p-value = 2.43e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 358 total aligned reads displayed.

TGGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT  >  NC_002947/3764763‑3765061
                                                                                                                                                     |                                                                                                                                                     
     aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg                                                                                                                                                  <  1:8396511/150‑1 (MQ=255)
     aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg                                                                                                                                                  <  1:3120875/150‑1 (MQ=255)
     aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg                                                                                                                                                  <  2:8166313/150‑1 (MQ=255)
      gCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCgg                                                                                                                                                 >  1:4773775/1‑150 (MQ=255)
       cGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCTGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGATCATGTTCCCGGt                                                                                                                                                <  1:620855/150‑1 (MQ=255)
       cGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt                                                                                                                                                <  2:1824597/150‑1 (MQ=255)
       cGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt                                                                                                                                                >  1:3495441/1‑150 (MQ=255)
        gTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTc                                                                                                                                               >  2:5728759/1‑150 (MQ=255)
         tCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGATCATGTTCCCGGTCa                                                                                                                                              <  1:2365691/150‑1 (MQ=255)
          cAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAc                                                                                                                                             <  2:4259010/150‑1 (MQ=255)
               cAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACg                                                                                                                                            <  2:5601038/146‑1 (MQ=255)
                aGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGa                                                                                                                                       <  2:8789877/150‑1 (MQ=255)
                aGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGa                                                                                                                                       <  1:6644199/150‑1 (MQ=255)
                aGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAAGATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGa                                                                                                                                       <  2:8549301/150‑1 (MQ=255)
                  gcgcCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgc                                                                                                                                     <  1:98091/150‑1 (MQ=255)
                      ccACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCt                                                                                                                                 <  2:3347068/150‑1 (MQ=255)
                      ccACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCt                                                                                                                                 >  2:7135670/1‑150 (MQ=255)
                        aCGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTgg                                                                                                                               >  2:6172620/1‑150 (MQ=255)
                         cGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGc                                                                                                                              <  2:8325452/150‑1 (MQ=255)
                            ccTGTGGACCGAGGCGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGa                                                                                                                           <  1:2499057/150‑1 (MQ=255)
                              tgtgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATc                                                                                                                         <  2:7063301/150‑1 (MQ=255)
                                tgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCAt                                                                                                                       >  2:6738447/1‑150 (MQ=255)
                                 ggACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGTTCATg                                                                                                                      <  2:4357698/150‑1 (MQ=255)
                                 ggACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATg                                                                                                                      <  1:8960255/150‑1 (MQ=255)
                                 ggACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATg                                                                                                                      <  1:5897944/150‑1 (MQ=255)
                                  gACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGc                                                                                                                     <  1:3348978/150‑1 (MQ=255)
                                   aCCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATACCGGTCACGGTCGAGCGCCTGGCGGATCATGcc                                                                                                                    >  1:401097/1‑150 (MQ=255)
                                    ccGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCg                                                                                                                   >  2:5951817/1‑150 (MQ=255)
                                       aggagCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGtgc                                                                                                                >  1:1944241/1‑150 (MQ=255)
                                        ggagCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGtgct                                                                                                               <  1:7907708/150‑1 (MQ=255)
                                           gCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCa                                                                                                            >  1:4826144/1‑150 (MQ=255)
                                             gACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAAc                                                                                                          <  2:3929217/150‑1 (MQ=255)
                                               cGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCa                                                                                                        <  1:2687357/150‑1 (MQ=255)
                                                gTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCACGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAGGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAAcccc                                                                                                       <  2:7838418/150‑3 (MQ=255)
                                                gTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGTGCGCCTGGCGGATCATGCCGTGCTGCAACCAc                                                                                                       >  2:7625914/1‑150 (MQ=255)
                                                     aaTATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTAcc                                                                                                  >  1:171321/1‑150 (MQ=255)
                                                     aaTATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTAcc                                                                                                  >  1:7065502/1‑150 (MQ=255)
                                                           gtggCCGTACACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCt                                                                                            >  2:5352439/3‑150 (MQ=255)
                                                           gAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGccg                                                                                            >  1:8578100/1‑149 (MQ=255)
                                                            aGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTg                                                                                           <  2:773844/150‑1 (MQ=255)
                                                               ccGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCgg                                                                                        <  2:2697593/150‑1 (MQ=255)
                                                               ccGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCgg                                                                                        <  2:1530027/150‑1 (MQ=255)
                                                               ccGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCgg                                                                                        <  1:606680/150‑1 (MQ=255)
                                                               ccGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACAAGATCCCCGTCACGGTCGAGCGCCTGGCGGAGCATGCCGTGCTGCAACCCCATACCCCGCCTGCgg                                                                                        >  1:3832935/1‑150 (MQ=255)
                                                                cGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGc                                                                                       <  1:4927751/150‑1 (MQ=255)
                                                                    tACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACtt                                                                                   <  2:7430454/150‑1 (MQ=255)
                                                                     aCGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTg                                                                                  >  2:8603051/1‑150 (MQ=255)
                                                                        gCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACAGGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACGTGCCg                                                                               <  2:9022943/150‑1 (MQ=255)
                                                                         ccACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGt                                                                              <  1:9074049/150‑1 (MQ=255)
                                                                          cACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtg                                                                             <  1:689937/150‑1 (MQ=255)
                                                                          cACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtg                                                                             <  2:6474654/150‑1 (MQ=255)
                                                                          cACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtg                                                                             <  1:7659912/150‑1 (MQ=255)
                                                                           aCGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgc                                                                            >  1:4294477/1‑150 (MQ=255)
                                                                           aCGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgc                                                                            <  2:5980281/150‑1 (MQ=255)
                                                                           aCGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgc                                                                            <  2:6086241/150‑1 (MQ=255)
                                                                           aCGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgc                                                                            <  2:8728047/150‑1 (MQ=255)
                                                                            cGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATTCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgct                                                                           >  1:4667948/1‑150 (MQ=255)
                                                                             ggCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgctg                                                                          <  1:5805598/150‑1 (MQ=255)
                                                                                gcCGAGGATAACGCCTACAAGTCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGctgctg                                                                       <  2:1095989/150‑1 (MQ=255)
                                                                                gcCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGctgctg                                                                       <  1:8136630/150‑1 (MQ=255)
                                                                                  cGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGa                                                                     >  2:8020158/1‑150 (MQ=255)
                                                                                  cGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGa                                                                     <  1:139982/150‑1 (MQ=255)
                                                                                        tAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACgg                                                               <  1:2952158/150‑1 (MQ=255)
                                                                                          aCGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGc                                                             <  2:3050197/150‑1 (MQ=255)
                                                                                          aCGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGc                                                             <  2:6952098/150‑1 (MQ=255)
                                                                                             ccTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCtt                                                          <  1:4633060/150‑1 (MQ=255)
                                                                                             ccTACAAGGCGGAAAAGATCAAGAGCGCCTGGGCGTTCGACGTGACCGGGACCATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAA‑CACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTg                                                         <  2:6605/150‑1 (MQ=255)
                                                                                                  aaGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTca                                                     <  1:3714302/150‑1 (MQ=255)
                                                                                                      cGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAgc                                                 <  2:3495441/150‑1 (MQ=255)
                                                                                                             gATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGa                                          >  1:7361519/1‑150 (MQ=255)
                                                                                                              aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGAc                                         >  1:5953857/1‑150 (MQ=255)
                                                                                                              aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACGTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGAc                                         <  2:5135674/150‑1 (MQ=255)
                                                                                                               tCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACa                                        >  2:4122451/1‑150 (MQ=255)
                                                                                                                  aGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGc                                     <  1:7173881/150‑1 (MQ=255)
                                                                                                                     gcgcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAAt                                  <  2:197215/150‑1 (MQ=255)
                                                                                                                       gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATgg                                <  1:6384848/150‑1 (MQ=255)
                                                                                                                        ccTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATggg                               <  1:5115260/150‑1 (MQ=255)
                                                                                                                         cTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGt                              <  1:2122518/150‑1 (MQ=255)
                                                                                                                              gctcgaccGTGACCGGGATCATGTTCCCGGTCAC‑GTCGAACGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCa                        >  1:3383328/8‑150 (MQ=38)
                                                                                                                                  cGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGa                     <  1:5652223/150‑1 (MQ=255)
                                                                                                                                   gACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGAt                    >  1:3369544/1‑150 (MQ=255)
                                                                                                                                   gACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGAt                    >  1:6752880/1‑150 (MQ=255)
                                                                                                                                   accGTGACCGGGATCATGTTCCCGGTCAC‑GTCGAACGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATc                   >  2:3754657/3‑150 (MQ=39)
                                                                                                                                    aCGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATc                   <  2:5882261/150‑1 (MQ=255)
                                                                                                                                    aCGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATc                   <  2:6351503/150‑1 (MQ=255)
                                                                                                                                    aCGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATc                   <  1:8422102/150‑1 (MQ=255)
                                                                                                                                      gTGACCGGGATCATGTTCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGc                 >  1:2138128/1‑150 (MQ=255)
                                                                                                                                      atGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGc                 <  2:8414808/149‑1 (MQ=255)
                                                                                                                                       tGACCGGGATCATGTTCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCa                >  1:8652747/1‑150 (MQ=255)
                                                                                                                                       tGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCa                <  2:2148131/150‑1 (MQ=255)
                                                                                                                                          ccGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAccc             <  2:3600920/150‑1 (MQ=255)
                                                                                                                                           cGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCa            >  2:3138420/1‑150 (MQ=255)
                                                                                                                                           cGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCa            >  1:5473264/1‑150 (MQ=255)
                                                                                                                                            gggAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCAt           <  2:4762261/150‑1 (MQ=255)
                                                                                                                                             ggAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATg          <  2:4841722/150‑1 (MQ=255)
                                                                                                                                                 cATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCaa      <  1:1082040/150‑1 (MQ=255)
                                                                                                                                                  aTGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAg     >  2:160006/1‑150 (MQ=255)
                                                                                                                                                  aTGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAg     <  1:649196/150‑1 (MQ=255)
                                                                                                                                                    gATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGa   >  2:3432260/1‑150 (MQ=255)
                                                                                                                                                     aTCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAt  <  1:7826430/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCGCCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT  >  NC_002947/3764763‑3765061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑