Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,770,225 T→G 5.1% L92R (CTG→CGG)  PP_5600 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,770,2250TG 5.1% 1245.4 / 30.7 379L92R (CTG→CGG) PP_5600hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (225/133);  new base G (7/14);  total (232/147)
Fisher's exact test for biased strand distribution p-value = 1.01e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 382 total aligned reads displayed.

TGATGCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGC  >  NC_002947/3770076‑3770374
                                                                                                                                                     |                                                                                                                                                     
tgatgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTGTTTCGGCCTGCTGACCCt                                                                                                                                                       >  2:6899755/1‑150 (MQ=255)
   tgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCt                                                                                                                                                    <  2:4452170/150‑1 (MQ=255)
   tgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGACTGTTCAGCGCCACACTGCTGGCCGTCTGTTTCGGCCTGCTGACCCTGCt                                                                                                                                                    >  1:4917718/1‑150 (MQ=255)
           ggTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGca                                                                                                                                            <  1:3508008/150‑2 (MQ=255)
               cACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGcc                                                                                                                                        >  1:6002947/1‑150 (MQ=255)
                 cGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCgg                                                                                                                                      <  2:7619255/150‑1 (MQ=255)
                  ggCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCggg                                                                                                                                     <  2:1689842/150‑1 (MQ=255)
                   gCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGc                                                                                                                                    >  2:3646527/1‑150 (MQ=255)
                   gCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGc                                                                                                                                    <  1:6185604/150‑1 (MQ=255)
                   gCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGc                                                                                                                                    <  1:995352/150‑1 (MQ=255)
                    ccGCCAGCAGCGGCATGGTCCACGGTGAGCAAGACGTCAGCGATCCGACCCGGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCa                                                                                                                                   <  1:3966364/150‑1 (MQ=255)
                    ccGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTG‑CCCGGCTCGCCGGCGAGCAgggtca                                                                                                                                  <  1:1019145/150‑4 (MQ=255)
                      gACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTACAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGc                                                                                                                                 >  2:6449502/1‑150 (MQ=255)
                         agcagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGcccc                                                                                                                              <  2:424114/150‑1 (MQ=255)
                            agcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTa                                                                                                                           >  2:3827741/1‑150 (MQ=255)
                                gCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTTGCCGGCGAGCCGGGCAGCCCCTTACcca                                                                                                                       >  1:9137166/1‑150 (MQ=255)
                                gCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACcca                                                                                                                       >  2:8960141/1‑150 (MQ=255)
                                 cATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACccaa                                                                                                                      <  2:2189892/150‑1 (MQ=255)
                                  aTGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACccaac                                                                                                                     <  2:7015434/150‑1 (MQ=255)
                                  aTGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACccaac                                                                                                                     >  2:5374461/1‑150 (MQ=255)
                                     gTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACcccaccaa                                                                                                                  >  1:3059963/1‑150 (MQ=255)
                                       ccAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCaaccaacc                                                                                                                >  2:2383964/1‑150 (MQ=255)
                                        cAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCt                                                                                                               >  2:3053013/1‑150 (MQ=255)
                                         aaGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTc                                                                                                              <  2:6314607/150‑1 (MQ=255)
                                            gTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGc                                                                                                           <  2:1160428/150‑1 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACCCTGCGGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      <  1:2238976/150‑1 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      >  2:7720435/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      >  1:6127376/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      >  1:2564739/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCACCGCCACGc                                                                                                      >  1:962907/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCGTACCCAACCCACCTCCGCCACGc                                                                                                      >  1:6938611/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGCGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      >  2:6789664/1‑150 (MQ=255)
                                                 cAAGACTTCAGCGATCCGACCCAGTCAGACGGCGGTGACTGCGAGATCGCCACACTGATCAGCGCCACACTGCTGTCCGTCTTTTTCGGCCTGCTGACCCTCCTCGCCGCCGAGCCGGCAAGACCCATACCCAAACAAACACCGCCACGc                                                                                                      >  2:6737995/1‑150 (MQ=255)
                                                  aaGACGTCCGCGACCCGCCCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCGGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGcc                                                                                                     <  1:8265954/150‑1 (MQ=255)
                                                     aCTTCAGCTATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCTTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGc                                                                                                  <  1:4050222/150‑1 (MQ=255)
                                                       ttCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGccc                                                                                                >  1:3393050/1‑150 (MQ=255)
                                                       ttCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGccc                                                                                                >  1:5043916/1‑150 (MQ=255)
                                                       ttCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACCCCTGccc                                                                                                >  1:8655946/1‑150 (MQ=255)
                                                       ttCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCGCCGCCACGCCTGccc                                                                                                >  1:5492501/1‑150 (MQ=255)
                                                        tCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCa                                                                                               <  1:7022696/150‑1 (MQ=255)
                                                          aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  2:8286807/1‑150 (MQ=255)
                                                          aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  2:2722854/1‑150 (MQ=255)
                                                          aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  1:1554748/1‑150 (MQ=255)
                                                              aTCCGACCCTGTCTGCCGGCGGTGACTTCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGAGCCTGCTCGCCGGCGAGCCGGGCATCCCCTTACCCAACCTACCTCCGCCACGCCTGCACAagcaga                                                                                         <  2:1316164/150‑2 (MQ=255)
                                                                  gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGc                                                                                                  <  1:5519161/137‑1 (MQ=255)
                                                                   aCCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCGGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTgg                                                                                    <  1:8791837/150‑1 (MQ=255)
                                                                       tGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCAc                                                                                >  2:6203510/1‑150 (MQ=255)
                                                                            gCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTc                                                                           <  1:2997440/150‑1 (MQ=255)
                                                                              cggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCaa                                                                         <  2:8682848/150‑1 (MQ=255)
                                                                              cggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCaa                                                                         >  1:3626423/1‑150 (MQ=255)
                                                                               ggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAAt                                                                        >  1:7920237/1‑150 (MQ=255)
                                                                               ggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAAt                                                                        >  1:5166720/1‑150 (MQ=255)
                                                                                 cggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGG‑CGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATccc                                                                     <  2:4563983/150‑1 (MQ=255)
                                                                                  ggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATccc                                                                     >  1:6292838/1‑150 (MQ=255)
                                                                                   gTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATcccc                                                                    >  1:5775247/1‑150 (MQ=255)
                                                                                   gTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATcccc                                                                    <  2:3994264/150‑1 (MQ=255)
                                                                                   gTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATcccc                                                                    <  2:8084284/150‑1 (MQ=255)
                                                                                    tGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCcg                                                                   >  2:1520046/1‑150 (MQ=255)
                                                                                    tGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCcg                                                                   >  2:7427264/1‑150 (MQ=255)
                                                                                    tGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCcg                                                                   <  1:7153345/150‑1 (MQ=255)
                                                                                     gACTGCGTGATCGCCATCCTGTTCAGCGCCACACTGATGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCTCGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCcgc                                                                  <  2:7341278/150‑1 (MQ=255)
                                                                                       cTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGGGGGCCGTATTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCgcgc                                                                <  1:8540965/150‑1 (MQ=255)
                                                                                          cGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctc                                                             >  1:7725771/1‑150 (MQ=255)
                                                                                          cGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctc                                                             >  2:5442186/1‑150 (MQ=255)
                                                                                           gTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctct                                                            >  1:6832123/1‑150 (MQ=255)
                                                                                             gATCGCCAGCGTGTTCAGCGCCACAGTGGTGGCCGTCTTTTTGGGCCTGCTGACCGGGCTCGCCGGCGCGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                          <  1:4266095/150‑1 (MQ=255)
                                                                                             gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                          >  2:188118/1‑150 (MQ=255)
                                                                                             gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                          >  1:5887238/1‑150 (MQ=255)
                                                                                              aTCTCCAGCCTGTTCTGCGCCACACTGGTGGCCGTCTTTTTCGGCCTGCTTACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTccc                                                         <  1:7276397/150‑1 (MQ=255)
                                                                                              aTCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTTTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTccc                                                         <  1:1926019/150‑1 (MQ=255)
                                                                                               tCGCCAGCCTGTTCAGCGCCACACTGCGGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcg                                                        <  1:8109245/150‑1 (MQ=255)
                                                                                                 gCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgct                                                      >  2:7747745/1‑150 (MQ=255)
                                                                                                 gCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgct                                                      >  1:4722202/1‑150 (MQ=255)
                                                                                                  ccAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgctt                                                     >  2:6148602/1‑150 (MQ=255)
                                                                                                   cAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCGCTCCcgcttc                                                    >  1:1753249/1‑150 (MQ=255)
                                                                                                        tGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCgcttcgcttc                                               >  2:8418219/1‑150 (MQ=255)
                                                                                                        ggTTCCGCGCCACACGGCGGGCCGTCTTTTTCGGCCTGCGGCCCCGGCGCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCgcttcgcttc                                               <  1:530791/149‑1 (MQ=255)
                                                                                                          ttCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtctc                                             >  1:8901143/1‑150 (MQ=255)
                                                                                                           tCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTcg                                            >  1:3896818/1‑150 (MQ=255)
                                                                                                             aGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCaa                                                                         <  2:5664568/119‑1 (MQ=255)
                                                                                                             aGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTcgcg                                          >  2:4837212/1‑150 (MQ=255)
                                                                                                                gcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTc                                       >  1:1408575/1‑150 (MQ=255)
                                                                                                                  cacaCTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCGTCGCTTCTCGCGGTCTg                                     >  2:3504566/1‑150 (MQ=255)
                                                                                                                       tgctgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATc                                <  2:2904513/150‑1 (MQ=255)
                                                                                                                        gctgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCg                               <  2:4722563/150‑1 (MQ=255)
                                                                                                                            gCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCAc                           <  2:3147054/150‑1 (MQ=255)
                                                                                                                            gCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCAc                           <  1:3665020/150‑1 (MQ=255)
                                                                                                                               gTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTc                        >  1:1127843/1‑150 (MQ=255)
                                                                                                                                tCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcc                       >  2:7226320/1‑150 (MQ=255)
                                                                                                                                tCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCACCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcc                       >  1:7609447/1‑150 (MQ=255)
                                                                                                                                  tttttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcccc                     >  1:4804994/1‑150 (MQ=255)
                                                                                                                                  tttttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcccc                     <  1:4413334/150‑1 (MQ=255)
                                                                                                                                  tttttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcccc                     <  2:7881988/150‑1 (MQ=255)
                                                                                                                                  tttttCGGCCGGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcccc                     <  1:4610538/150‑1 (MQ=255)
                                                                                                                                         gCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTgccgc              <  1:6580125/150‑1 (MQ=255)
                                                                                                                                             gctgACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGa          >  1:1271598/1‑150 (MQ=255)
                                                                                                                                                  cccGGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGc     >  1:3248022/1‑150 (MQ=255)
                                                                                                                                                   ccTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCACCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa    >  1:8949061/1‑150 (MQ=255)
                                                                                                                                                    cTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAg   >  2:5944037/1‑150 (MQ=255)
                                                                                                                                                     tGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGc  <  2:3325808/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGATGCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGC  >  NC_002947/3770076‑3770374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑