| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,778,344 | T→G | 15.6% | intergenic (+61/‑82) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,778,344 | 0 | T | G | 15.6% | 402.7 / 13.4 | 222 | intergenic (+61/‑82) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (50/114); new base G (38/2); total (105/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 228 total aligned reads displayed.
CAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGC > NC_002947/3778196‑3778493 | cAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTg < 1:5907027/150‑1 (MQ=255) gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCg > 2:7902/1‑150 (MQ=255) cATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCgc > 1:3850930/1‑149 (MQ=255) cATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGa > 1:690696/1‑150 (MQ=255) aTCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAc < 2:8987301/150‑1 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGACa > 2:4697068/1‑150 (MQ=255) cTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGCCaa > 1:4091653/1‑150 (MQ=255) tGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCggccaa > 2:74940/1‑145 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 1:6541390/150‑1 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 2:1171021/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGGCGGCGCCAAAAAg > 1:7840346/1‑150 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCaaaaaa > 1:1834160/1‑149 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAgg < 1:7375290/150‑1 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAAgg > 1:8214109/1‑150 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:2466889/150‑1 (MQ=255) ccGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCCAAAAAgcgc > 1:5043006/1‑150 (MQ=255) cGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCCAAAAGgcgcc > 1:766038/1‑149 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTTCGCCAGCGACAAAAAGGGGcac > 2:395272/1‑150 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac < 2:8367371/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac < 2:8716584/150‑1 (MQ=255) cgccgcCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACg < 2:5118274/150‑1 (MQ=255) gccgccCCAGAGCCAAGGCTTCATGCTGGTAGACACACTGTTCATCCTGCCCAGTTAGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGGGCACCACgg > 2:9142460/1‑150 (MQ=255) cgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGaa < 2:3742849/150‑1 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCCAAAAGGCGCCCCCCGGacc > 2:3318799/1‑148 (MQ=255) ccccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCCCGGTACt > 2:4291194/1‑150 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGCACATg > 2:2855897/1‑150 (MQ=255) cAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGt > 2:3007989/1‑150 (MQ=255) agtgCCATGGCTTCTTGGTGGTTGGCACAGTGTTCCTCGTGCCCAGTTCGCTTGGCTGTGCCGACTGTTCATGATGGCCGCCGGCTTGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTa < 2:6748909/147‑1 (MQ=255) agagCCACGGCTTCTTGCTGTTAGGCACACTGTTCATCCTGCCCAGTTCGGTTGGCTGATCCGACTTTTCTTGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTa < 2:2109099/150‑1 (MQ=255) agagCCACGGCTCCTGGCTGTTTGGCACACTGGACAGCCTCCCCTGTTCGGTTGGCTGAGCCGCGGGTTAATGAGGGCCGCGGGCTGGCGCCGCCTTTGAGCCCTCGCCGTGTTGCGCCTGCCACAAAAAGGCGCACCACGGAACTTGTa < 2:8668053/150‑1 (MQ=255) gagCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCTTGATGGCCGCCGGCATGCGCTGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTAc < 2:4408706/150‑1 (MQ=255) cAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCAGGGACCAAAAAGCCCACCCCCCAACCTGTaaaccc > 1:7022822/1‑145 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCAGCGACAAAAAGGCCCACCACCGACCTTGTACAGccc > 2:6191999/1‑150 (MQ=255) ggCTTCTTGCTGGTCGGCACACTGTTCCTCCGGCCCCGTTGGCTTGGCTCATCCGACTGTTCCGGTTGCCCGCCGGCATGCGCAGCATTTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGc < 2:1676068/150‑1 (MQ=255) gCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCCCCAGCGACAAAAATGCGCACCACGGAACTAGTACACCCCCCa > 2:643655/1‑150 (MQ=255) ttCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTAAAGCCCGCAAc > 2:3774259/1‑150 (MQ=255) ttCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAACATGTACAGCCCCCAAc > 2:3366499/1‑150 (MQ=255) ttCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCCCCACGCAACGTGTACAGCCCGCAAc > 2:901083/1‑150 (MQ=255) aTGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACCGAACAAGTAAAGCCCCCaaacga > 2:6296030/1‑146 (MQ=255) cTGTTAGGCACACTTTTCATCCGGCCCCTTTGGCTTGGCTGATCCGACTTTTATTGATGGCCGCCGGCTTGCGCAGCCATTGCGCCCGCGCCGTGGTGCGCCTGCCAAAAAAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGc < 2:6923380/150‑1 (MQ=255) gTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGc < 2:605685/150‑1 (MQ=255) gccacaGTTTTCAGCGTGCCCTTTTGGGTTGGCTGATCCGAGTTTTCTTGTTGGCCGCGGGCTGGCGCCGCCATTGCGCCCGCGCGGTGGTGCGCCTGCGAAAAAAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTa < 1:7222695/148‑1 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCCCCACCGCACCTGTAAAACCCCCCACCGGTGCGGcggact > 2:1105926/1‑145 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTTCGCCTGCGAAAAAAATGCGCAACAAGGAACTTGTAAAGCCCGCAAAGGATTAGGCTTAATg > 2:4904191/1‑150 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGACCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAACGCGCACCACCGAAAATGTACAGCCCGCAACGGATGCGGCGTAATg > 1:9167605/1‑150 (MQ=255) cacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGGGACAAAAAGGCGCACCACGGAACTATTAAAGCCCCCAACCGATGCGGCTTAATgc > 2:3368885/1‑150 (MQ=255) acTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcg < 2:5267841/150‑1 (MQ=255) gTTCAGCCGGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCCGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 2:5662739/150‑1 (MQ=255) aTCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACCGAACGTGTACAGCCCCCAACGGATGCGGCTTAATGCGCGCCaaa > 2:8269145/1‑148 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAAAATGTACAGCCCGCAACCGATGCGGCTTAATTCGCGCCatat > 2:1319329/1‑150 (MQ=255) ccTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATAtt < 2:8830118/150‑1 (MQ=255) cggCCCCGTTGGGTGGGCTGAGCCGAGTTTTCTTGTTGGCCGCGGGCTGGCCCCGCCTTTGCGCCCTCGGGGTGGGGCGCCGGCCAAAAAACGCCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTc < 1:968975/148‑1 (MQ=255) cAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACGGAACATGTAAAGCCCGCAACGGATGCGGCTTAATTCGCGCCCTAATCGCTCg > 2:5188556/1‑150 (MQ=255) aGTTCGCTTGGCTGATCCGACTGTTCATGTGGGCCGCCGGCATGCGCAGCCATTGAGCCCGCGCGGTGGGGCGCCTGCCACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:1077238/150‑1 (MQ=255) ttCGCTTGGCTTAGCCGAGTGTACTTGATGGCCGCCGTCATGCGAAGCCTTTGAGCCCTCGCCGTGGTGGGCGTGCCAATAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGt < 2:1618234/150‑1 (MQ=255) ggttGGCTTACCCGCGTGTCCCTGAGGGCCGCCGGCATGCGCCGCCATTGCGCCCGCGCCGTGGGGCGCCTGCCACAAAACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:445021/148‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:8098813/150‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGGGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACg < 1:7513012/92‑1 (MQ=255) tGATCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCTGCGACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCt < 1:1328990/150‑1 (MQ=255) aTCCGATTGTTCTTGTTGCCCGCCGGCAGGCGCCGCCATTGCGCCCGGGCGGGGGTGCGCCTGCCAAAAAACGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCttt < 1:3190965/150‑1 (MQ=255) aTCCGAGTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCttt < 2:2764099/150‑1 (MQ=255) tCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAAATTGTACAGCCCGCAACGGATGCGGCGTAATTCGCGCCATATTGGCTCGGGTGACGCAAGCTTTc > 2:8154735/1‑150 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:6017878/150‑1 (MQ=255) gtCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATGCGCTCGGGTGACTCATGCTTTcacgtgcac < 2:5533580/149‑1 (MQ=255) tCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGCACATGTACAGCCCCCAACCGATGCGGCGTAATGCGCGCCAAATTCGCTCGGGTGACTCAATCTTTaacgtgcacc > 2:5776323/1‑149 (MQ=255) tgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCCGCGGCGACAAAAAGGCGCCCCACCGAACGTGTTAAGCCCCCCACGGCGGCGGCGTAATTCGCGCCACAGTCGCGCGGGGGTCGACTGCTTTCACGTGCCCGTGcaca > 2:8607602/1‑150 (MQ=255) gccgcgGGCTTGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCTGCGAC‑AAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCt < 2:256856/150‑1 (MQ=255) ccgcggGCTGGCGCTGCCTTTGCGCCCTCGCCGTGGGGGGCCTGCTACAAAATGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCt < 1:5309817/150‑1 (MQ=255) gccgGCTTGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:2422008/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:2157978/150‑1 (MQ=255) cccggattGCGCAGCATTTGAGCCCTCGCGGGGGTGCGGCTGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5766193/143‑1 (MQ=255) cgGCATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:229368/150‑1 (MQ=255) cgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:1381883/150‑1 (MQ=255) cgGCAGGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:4648557/150‑1 (MQ=255) tGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGtt < 2:3468774/150‑1 (MQ=255) gcgcAGCCATTGAGCCCTCGCCGTGGTTCGCCAGCGACAAAAAGGCGCACCACCGAACTTGTAAAGCCCCCAAACGATGCGGCTTAAAGCGCGCCCGAATAGCTCGGGTGTCGCAATCTTTAAAGTGCACGTGCACAAATTTTTATGttg > 2:3561634/1‑149 (MQ=255) aGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGGCCAAAAAGCGCCCCCCGGCACATGTACAGCCCCCCACCGAGGCCGCGTAATTCGCGCCATAATAGCTCGGGGGGAGCATGCGTTCACGTGCCCGGGCACATCTTTGTGGGTTGgccg > 2:803543/1‑149 (MQ=255) cATTGCGCCCTCGCGGGGGGGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgcc < 1:1124381/150‑1 (MQ=255) gcgCCCGCGCGGTGGGGCGCCTGCCAAAAAATGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:2668209/148‑1 (MQ=255) gAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:2178463/150‑1 (MQ=255) tgCCCTCGCGGTGTTGCGCGTTCAAAAATACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATTTTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:1712739/149‑1 (MQ=255) aGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:6677172/150‑1 (MQ=255) cTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc < 2:1834160/150‑1 (MQ=255) tCGACGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACCTGCACGTGCACATCTTTGTCTGTTAGCCTGCCTCGCCGTGCt > 2:6568573/1‑150 (MQ=255) cgcgGTGGTGCGCCTGCGACAAAACGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTg < 1:2855897/150‑1 (MQ=255) gCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGt < 2:2730443/150‑1 (MQ=255) ccGTGGTGCGCCTGCGACAAAAATGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCATTGTCTGTTCGCCTGCCTCGCCGTGCTGtt > 2:4578784/1‑150 (MQ=255) gttggtggGCCTGCTAAAAAATGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTc < 1:4585291/148‑1 (MQ=255) gtggtgCGCCTGCGACAAAAAGGCGAACCACGGAACATGTACACCCAGCAACTGATGCGGCTTAATCCGCGCCATAATCGCACGGGTCACTCATGCTATCACGAGCACCAGAACATCTTTGTCTGTACGACTGCCTCGCCGTGCTGTTCa > 1:8623034/1‑150 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa > 2:5006731/1‑150 (MQ=255) tggggCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 1:6061213/150‑1 (MQ=255) gtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAcc > 2:2901164/1‑150 (MQ=255) tgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACct > 2:6363949/1‑150 (MQ=255) cgcCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgc > 1:3589788/1‑150 (MQ=255) cgcCTGCCAAAAACCGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgc < 1:3318799/150‑1 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg > 2:6384107/1‑150 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg > 1:8015478/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 1:3532738/1‑150 (MQ=255) cTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:5554699/150‑1 (MQ=255) tGCCACAACAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc < 1:1255858/150‑1 (MQ=255) | CAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGC > NC_002947/3778196‑3778493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |