| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,778,347 | G→C | 11.0% | intergenic (+64/‑79) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,778,347 | 0 | G | C | 11.0% | 481.4 / 11.1 | 227 | intergenic (+64/‑79) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (103/81); new base C (4/21); total (107/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 239 total aligned reads displayed.
GCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAT > NC_002947/3778198‑3778496 | gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCg > 2:7902/1‑150 (MQ=255) cATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCgc > 1:3850930/1‑149 (MQ=255) aTCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAc < 2:8987301/150‑1 (MQ=255) aTCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAc > 2:2178463/1‑150 (MQ=255) cTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGCCaa > 1:4091653/1‑150 (MQ=255) tGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGGGGCaaa > 1:1757499/1‑150 (MQ=255) tGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCggccaa > 2:74940/1‑145 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 1:6541390/150‑1 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCaaaaa > 2:6446978/1‑150 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:2466889/150‑1 (MQ=255) ccGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCCAAAAAgcgc > 1:5043006/1‑150 (MQ=255) cGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGTGGCCGGCGACAAAAAGgcgcc > 1:2056278/1‑149 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTTCGCCAGCGACAAAAAGGGGcac > 2:395272/1‑150 (MQ=255) cgccgcCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACg < 2:5118596/150‑1 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCCAAAAGGCGCCCCCCGGacc > 2:3318799/1‑148 (MQ=255) cAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGt > 2:3007989/1‑150 (MQ=255) agagCCACGGCTCCTGGCTGTTTGGCACACTGGACAGCCTCCCCTGTTCGGTTGGCTGAGCCGCGGGTTAATGAGGGCCGCGGGCTGGCGCCGCCTTTGAGCCCTCGCCGTGTTGCGCCTGCCACAAAAAGGCGCACCACGGAACTTGTa < 2:8668053/150‑1 (MQ=255) gagCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCTTGATGGCCGCCGGCATGCGCTGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTAc < 2:4408706/150‑1 (MQ=255) cgCCATGGCTTCTTGCTGGTTGGCACAGTGTTCATCGGGCCCTGTTGGGTTGGCTTATCCGAGTGTTCTTGTGGGCGGCGGGCTTGCGCCGCCTTGGCGCCCTCGCGGTGGTGCGCGTGCGACAAACCGGCGCACCACGGAACTTGTACa < 2:939270/149‑1 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCCAAAAGGCGCCCCCCGGCACGTGTGCCGccc > 1:8281369/1‑150 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGAGCAGCCATAGAGCCCTCGCCGAGGTGCGCAGTGGACAAAAAAGCGCAAAACCCAACTATTACAGcac > 2:880681/1‑148 (MQ=255) ttCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAACATGTACAGCCCCCAAc > 2:3366499/1‑150 (MQ=255) cATGGTGGTAGGCACACTGTACATCCTGCCCCGTGGGCGTGGCTTATCCGCGTTTTCAGGATGGCCGCGGGAATGCGCATCAATTTCGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACgg < 2:7067418/150‑1 (MQ=255) cATGCTGTTAGGCACACTGTACATCCTGCCCAGTTCGCTTGGCTTATCCGACTGTTAATGTTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACgg < 2:2132281/150‑1 (MQ=255) aTGCTGGTTGGCACACTGTTCATCCGGCCCTGTTCGATTGGCTGATCCGACTTTTCTTGTTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCGTGGGTGCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGa < 2:3488517/150‑1 (MQ=255) aTGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACCGAACAAGTAAAGCCCCCaaacga > 2:6296030/1‑146 (MQ=255) tGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAACGTGTAAAGCCCCCCACCGAt > 2:3900999/1‑150 (MQ=255) ggtGGTCGGCACTCTTTTAATCGTTCCCTGTTGGGTTGGCTTATCCGATTTTTATTTTTGGCCGCCGGAATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATg < 2:2491444/148‑1 (MQ=255) gCTGGTCGGAACACTTTGCATCGGGCCCAGTTCGCTTGGCTGATCCGACTGTTACTGATGGCCGCGGGCATGCGCAGCATTTGAGCCCTCGCGGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATg < 2:277697/150‑1 (MQ=255) gTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGc > 2:9049031/1‑150 (MQ=255) tAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCCAAAAGGCGCACCCAGCACCGTGTAAAGCCCGCCAACGCTGCGGCt > 2:8476237/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCCCCACCGACCATGTACAGCCCGCAAACGCTGCGGCTTAAt > 1:9074249/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAATGCGCACCACGGAACATGTAAAGCCCGCAACGGATGCGGCTTAAt > 2:6378666/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGGGCCAAAAAGGGGCCCCCCGGGACGTGTACAGCCCGCAACGGATGCGGCGTAAt > 2:1105331/1‑150 (MQ=255) cacaCTGTTCAGCCGGCCCCGTGCGCGTGGCTGAGCCGACTGTTCCTGAGGGCCGCGGGCTTGCGCAGCCATGGCGCCCGCGCGGGGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTGGTACAGCCCGCAACGGATGCGGCTTAAt < 2:1034990/150‑1 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTTCGCCTGCGAAAAAAATGCGCAACAAGGAACTTGTAAAGCCCGCAAAGGATTAGGCTTAATg > 2:4904191/1‑150 (MQ=255) cacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGGGACAAAAAGGCGCACCACGGAACTATTAAAGCCCCCAACCGATGCGGCTTAATgc > 2:3368885/1‑150 (MQ=255) tGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAATGCGCACCACGGCACTTGTAAAGCCCGCAACGGATGCGGCTGAATgcgcg > 2:8885474/1‑150 (MQ=255) gTTCAGCCGGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCCGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 2:5662739/150‑1 (MQ=255) ttCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAAAGCGCCCCACCGCACCAGTTCAGCCCCCCACCCCTGCGGCGGAATGCGCGcc > 1:6966676/1‑150 (MQ=255) aTCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCCCCACGGAACATGTACAGCCCGCAACGGATGCGGCTGAATGCGCGCCaaa > 2:8269296/1‑148 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACCAAAAGGCGCACCCCCGAACGTGTAACGCCCGCCACCGATGCGGCTTAATTCGCGCCctat > 2:8088767/1‑150 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAAAATGTACAGCCCGCAACCGATGCGGCTTAATTCGCGCCatat > 2:1319329/1‑150 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACCCCCGAACTTGTACAGCCCCCCACCGCTGGGGCGGAATTCGCGCCctat > 1:2846749/1‑150 (MQ=255) cccAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGCCAAAAAGGCGCCCCCCCGGACGTGTACCGCCCGCACCCGATGCGGGATAATGCGCGCCATATTAGcg > 2:8098936/1‑149 (MQ=255) cAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTTTAAAGCCCGCAACGGATGCGGCTTAATGCGCGCCCTATTCGCtag > 2:5188649/1‑148 (MQ=255) gtCGCTGGGCGGAGCCGACTGTTCATGCGGGCCGCCGGCATGCGCCCCCATTGCGCCCGCGCCGTGGTGCGCCTGCCACAAACCGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGt < 2:6219637/149‑1 (MQ=255) ggttGGCTTACCCGCGTGTCCCTGAGGGCCGCCGGCATGCGCCGCCATTGCGCCCGCGCCGTGGGGCGCCTGCCACAAAACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:445021/148‑1 (MQ=255) gattGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 1:7633968/148‑1 (MQ=255) gCTTGGCTGACCCGCCTGTTCATGCTGGCCGCCGGCCTGCGCCCCCATTGCGCCCCCGCCTTGGTGCGCCTGCCACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:5372271/150‑1 (MQ=255) ttGGCTTATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGCCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTc < 2:1419909/150‑1 (MQ=255) ttGGCTGATCCGAGTGTTCCTGTGGGCCGCCGGCTTGCGCAGCCATTGAGCCCGCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTc < 2:1758542/150‑1 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGTCGCACCACGGCACCTGTACAGCCCCCCACCCATGCGGCGTTATGCGCGCCACATTAGCGCGGGGGACTc > 2:2761751/1‑150 (MQ=255) gCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCCACAAAAAGGCGCACCACGGCACATGTAAAGCCCGCAACCGATTCGGCGTAATGCGCGCCATAATAGCTCGGGTGACTCaag > 1:6847981/1‑148 (MQ=255) tGATCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCTGCGACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCt < 1:1328990/150‑1 (MQ=255) gATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGGCTGGGTCAAAAATGCGCACCACGGAACTTGTTCAGCCCGCAAAGGATGCGGGGTATTGGGGGCCATATTAGGTCGGGTGAGTGATgggt > 1:7456761/1‑147 (MQ=255) tCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGAGCCGGCGCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:6394195/150‑1 (MQ=255) cccgcgtGTTCATGTGGGCCGCCGGCATGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCGGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:2350977/144‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:6017878/150‑1 (MQ=255) tCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGCACATGTACAGCCCCCAACCGATGCGGCGTAATGCGCGCCAAATTCGCTCGGGTGACTCAATCTTTaacgtgcacc > 2:5776323/1‑149 (MQ=255) ttgtgggCCGCGGGCATGCGCAGCCTTTGTGCCGTCGGGGTGGGGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcacgtgcacgtg < 1:8163688/145‑1 (MQ=255) ttcggcccggcgGCTGGCGCAGCATTGGCGCCCGCGCGGGGGGGCGCCTGCTAAAAAAAGCCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCacgtgcacgtgc < 1:7682757/144‑1 (MQ=255) ttgGCCGCCGGAATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACgtgcacgtgcac < 2:133096/149‑1 (MQ=255) tgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCCGCGGCGACAAAAAGGCGCCCCACCGAACGTGTTAAGCCCCCCACGGCGGCGGCGTAATTCGCGCCACAGTCGCGCGGGGGTCGACTGCTTTCACGTGCCCGTGcaca > 2:8607602/1‑150 (MQ=255) ccgccgGCATGCGACGCCTTTGTGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCt < 2:6176532/150‑1 (MQ=255) cccggattGCGCAGCATTTGAGCCCTCGCGGGGGTGCGGCTGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5766193/143‑1 (MQ=255) cggccggcgcCGCCATTGAGCCCGCGCCGTGGGGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:1117486/144‑1 (MQ=255) cgGCAGGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:4648557/150‑1 (MQ=255) gtcATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTc < 2:690696/148‑1 (MQ=255) gCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCCAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:1651710/150‑1 (MQ=255) gcgcAGCCATTGAGCCCTCGCCGTGGTTCGCCAGCGACAAAAAGGCGCACCACCGAACTTGTAAAGCCCCCAAACGATGCGGCTTAAAGCGCGCCCGAATAGCTCGGGTGTCGCAATCTTTAAAGTGCACGTGCACAAATTTTTATGttg > 2:3561634/1‑149 (MQ=255) cgcaaTTGCGCCCTCGCGGTGGTGCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcct < 1:958157/146‑1 (MQ=255) cATTGCGCCCTCGCGGGGGGGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgcc < 1:1124381/150‑1 (MQ=255) gcgCCCGCGCGGTGGGGCGCCTGCCAAAAAATGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:2668209/148‑1 (MQ=255) tgCCCTCGCGGTGTTGCGCGTTCAAAAATACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATTTTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:1712739/149‑1 (MQ=255) cgCCCTCGCCGTGGGGCGCCTGCCAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:7107245/149‑1 (MQ=255) aGCCCTCGCCGTGGTGTGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAATGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc > 2:1919532/1‑150 (MQ=255) aGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 2:6685216/150‑1 (MQ=255) aGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAACTTGTACAGCCCCCAATGGATGCGGCTTAATTCGCGCCATATTACCTCGGGTGACTCAAGCTTTCACGGGCACCAGCACAACTTTGTCTGTTAGCCAGCCTCGcc > 2:8203719/1‑150 (MQ=255) gCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGt < 2:2730443/150‑1 (MQ=255) ccGTGGTGCGCCTGCGACAAAAATGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCATTGTCTGTTCGCCTGCCTCGCCGTGCTGtt > 2:4578784/1‑150 (MQ=255) gttggtggGCCTGCTAAAAAATGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTc < 1:4585291/148‑1 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa > 2:5006731/1‑150 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa > 2:3756731/1‑150 (MQ=255) tggggCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 1:6061213/150‑1 (MQ=255) gtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAcc > 2:2901164/1‑150 (MQ=255) cgcCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgc > 1:3589788/1‑150 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg > 1:8015478/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:3007989/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 2:4860014/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:7270481/150‑1 (MQ=255) cTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:5554699/150‑1 (MQ=255) tGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc > 1:3527429/1‑150 (MQ=255) tGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc > 1:5547280/1‑150 (MQ=255) tGCCACAACAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc < 1:1255858/150‑1 (MQ=255) cGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGa < 2:5558992/150‑1 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:3360489/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:3220994/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt < 2:4362235/150‑1 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:6165489/1‑150 (MQ=255) | GCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAT > NC_002947/3778198‑3778496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |