| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,778,358 | G→C | 8.8% | intergenic (+75/‑68) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,778,358 | 0 | G | C | 8.8% | 635.8 / 12.0 | 238 | intergenic (+75/‑68) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (106/109); new base C (4/19); total (110/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.74e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 244 total aligned reads displayed.
CCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTGAC > NC_002947/3778210‑3778506 | ccGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCCAAAAAgcgc > 1:5043006/1‑150 (MQ=255) cGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGGCAAAAAGgcgcc > 2:1255858/1‑149 (MQ=255) cgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGaa < 2:2907000/150‑1 (MQ=255) ccccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAATGCGCACCACGGAACt > 2:4291189/1‑150 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGCACATg > 2:2855897/1‑150 (MQ=255) agtgCCATGGCTTCTTGGTGGTTGGCACAGTGTTCCTCGTGCCCAGTTCGCTTGGCTGTGCCGACTGTTCATGATGGCCGCCGGCTTGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTa < 2:6748909/147‑1 (MQ=255) agagCCACGGCTTCTTGCTGTTAGGCACACTGTTCATCCTGCCCAGTTCGGTTGGCTGATCCGACTTTTCTTGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTa < 2:2109099/150‑1 (MQ=255) gagCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCTTGATGGCCGCCGGCATGCGCTGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTAc < 2:4408706/150‑1 (MQ=255) tgCCATGGTTTCTTGCTGGTCGGCACAGTGTTCATCGTGCCCTGTTCGGTTGGGTGATCCTAGTTTTCTTGATGGCGGCGGGCATGCGCAGCCTTTGAGCCCTGGCGGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACa < 2:8679429/149‑1 (MQ=255) cgCCATGGCTTCTTGCTGGTTGGCACAGTGTTCATCGGGCCCTGTTGGGTTGGCTTATCCGAGTGTTCTTGTGGGCGGCGGGCTTGCGCCGCCTTGGCGCCCTCGCGGTGGTGCGCGTGCGACAAACCGGCGCACCACGGAACTTGTACa < 2:939270/149‑1 (MQ=255) cgCCACGGCTTCTTGGGGGTCGGCACCCTGTTCCCCCTGCCCCGTTCGGTGGGCTTATCCGACTGTTCTTGTTGGCCGCGGGCCGGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAACGGCGCCCCACGGAACTTGTACa < 2:3464861/149‑1 (MQ=255) cATGGTGGTAGGCACACTGTACATCCTGCCCCGTGGGCGTGGCTTATCCGCGTTTTCAGGATGGCCGCGGGAATGCGCATCAATTTCGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACgg < 2:7067418/150‑1 (MQ=255) aTGCTGGTTGGCACACTGTTCATCCGGCCCTGTTCGATTGGCTGATCCGACTTTTCTTGTTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCGTGGGTGCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGa < 2:3488517/150‑1 (MQ=255) aTGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACCGAACAAGTAAAGCCCCCaaacga > 2:6296030/1‑146 (MQ=255) gCTGGTCGGAACACTTTGCATCGGGCCCAGTTCGCTTGGCTGATCCGACTGTTACTGATGGCCGCGGGCATGCGCAGCATTTGAGCCCTCGCGGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATg < 2:277697/150‑1 (MQ=255) cTGTTAGGCACACTTTTCATCCGGCCCCTTTGGCTTGGCTGATCCGACTTTTATTGATGGCCGCCGGCTTGCGCAGCCATTGCGCCCGCGCCGTGGTGCGCCTGCCAAAAAAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGc < 2:6923380/150‑1 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCCCACCACCGACCATGTACAGCCCGCAACCGATGCgg > 2:3113629/1‑150 (MQ=255) gTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGc < 2:605685/150‑1 (MQ=255) gTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGc > 2:9049031/1‑150 (MQ=255) tAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCCAAAAGGCGCACCCAGCACCGTGTAAAGCCCGCCAACGCTGCGGCt > 2:8476237/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCCCCACCGACCATGTACAGCCCGCAAACGCTGCGGCTTAAt > 1:9074249/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAATGCGCACCACGGAACATGTAAAGCCCGCAACGGATGCGGCTTAAt > 2:6378666/1‑150 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAAGCGCCCCCCGGAACAATTAAAGCCCCCCAAGGATTCGGCGTAAtt > 2:4625012/1‑149 (MQ=255) acTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcg < 2:5267841/150‑1 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCCAAAAGGCGCCCCCCCGGCCGGGTACCGCCCCCCCCGGCTGCGGCGGAATtcgcgc > 2:5082000/1‑150 (MQ=255) gTTCAGCCGGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCCGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 2:5662739/150‑1 (MQ=255) aTCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCCCCACGGAACATGTACAGCCCGCAACGGATGCGGCTGAATGCGCGCCaaa > 2:8269296/1‑148 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACCCCCGAACTTGTACAGCCCCCCACCGCTGGGGCGGAATTCGCGCCctat > 1:2846749/1‑150 (MQ=255) ccTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATAtt < 2:8830118/150‑1 (MQ=255) cggCCCCGTTGGGTGGGCTGAGCCGAGTTTTCTTGTTGGCCGCGGGCTGGCCCCGCCTTTGCGCCCTCGGGGTGGGGCGCCGGCCAAAAAACGCCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTc < 1:968975/148‑1 (MQ=255) cccAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGCCAAAAAGGCGCCCCCCCGGACGTGTACCGCCCGCACCCGATGCGGGATAATGCGCGCCATATTAGcg > 2:8098936/1‑149 (MQ=255) cAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACGGAACATGTAAAGCCCGCAACGGATGCGGCTTAATTCGCGCCCTAATCGCTCg > 2:5188556/1‑150 (MQ=255) cAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCCGCGGCAAAAAGGCGCCCCACGGCACATGTAAACCCCCCAACCGCTTCGGCGTGATGCGCGCCCTATTAGcgcg > 2:1785356/1‑150 (MQ=255) aGTTCGCTTGGCTGATCCGACTGTTCATGTGGGCCGCCGGCATGCGCAGCCATTGAGCCCGCGCGGTGGGGCGCCTGCCACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:1077238/150‑1 (MQ=255) gtCGCTGGGCGGAGCCGACTGTTCATGCGGGCCGCCGGCATGCGCCCCCATTGCGCCCGCGCCGTGGTGCGCCTGCCACAAACCGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGt < 2:6219637/149‑1 (MQ=255) ggttGGCTTACCCGCGTGTCCCTGAGGGCCGCCGGCATGCGCCGCCATTGCGCCCGCGCCGTGGGGCGCCTGCCACAAAACGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:445021/148‑1 (MQ=255) gattGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 1:7633968/148‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGGGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACg < 1:7513012/92‑1 (MQ=255) ttGGCTTATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGCCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTc < 2:1419909/150‑1 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCCCCGGACTTGTACAGCCCGCAAAGGATGCGGCTTTAATCGCGCCATATTGGCTCGGGTGGCTc > 2:4895569/1‑150 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGGGCACCCCGGAACGTGTAAAGCCCCCCAACGAGGCGGCGTAATGCGCGCCAAATTGGCTCggggggcgc > 2:3237912/1‑144 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGTCGCACCACGGCACCTGTACAGCCCCCCACCCATGCGGCGTTATGCGCGCCACATTAGCGCGGGGGACTc > 2:2761751/1‑150 (MQ=255) gCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGAACGTGTACAGCCCGCAACCGAAGCGGCGTAATGCGCGCCAAAATCGCTCCGGGGACGCATg > 2:8912400/1‑150 (MQ=255) tGATCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCTGCGACAAACCGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCt < 1:1328990/150‑1 (MQ=255) tCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAAATTGTACAGCCCGCAACGGATGCGGCGTAATTCGCGCCATATTGGCTCGGGTGACGCAAGCTTTc > 2:8154735/1‑150 (MQ=255) tCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGAGCCGGCGCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:6394195/150‑1 (MQ=255) cccgcgtGTTCATGTGGGCCGCCGGCATGCGCAGCCTTTGCGCCCTCGCGGTGGTGCGCCGGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:2350977/144‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:6017878/150‑1 (MQ=255) tCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGCACATGTACAGCCCCCAACCGATGCGGCGTAATGCGCGCCAAATTCGCTCGGGTGACTCAATCTTTaacgtgcacc > 2:5776323/1‑149 (MQ=255) cATGATGGCCGCCGGATTGCGCAGCAATTGAGCCCTCGCGGTGTTGCGCATGCTAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcacgtgcacgt < 2:3339944/150‑1 (MQ=255) ttgGCCGCCGGAATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACgtgcacgtgcac < 2:133096/149‑1 (MQ=255) gccgGCTTGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:2422008/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCCCCAAAAAGGCGCACCCCCGGACGAGTACAGCCCCCAACCGCTGCGGCGTAAAGCGCGCCCTAATCGCGCGGGTGGCGCATGCATTGACGTGCACGGGcacaaatat > 2:2617076/1‑145 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:2157978/150‑1 (MQ=255) cccggattGCGCAGCATTTGAGCCCTCGCGGGGGTGCGGCTGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5766193/143‑1 (MQ=255) cggccggcgcCGCCATTGAGCCCGCGCCGTGGGGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:1117486/144‑1 (MQ=255) cgGAATGCGCAGCCTTTGCCCCCTCGGGGTGGGGCGCCTCCAAAAAATCGGGCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 1:858815/150‑1 (MQ=255) gcttGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCTAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 1:663776/147‑1 (MQ=255) gCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCCAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:1651710/150‑1 (MQ=255) gcgcAGCCATTGAGCCCTCGCCGTGGTTCGCCAGCGACAAAAAGGCGCACCACCGAACTTGTAAAGCCCCCAAACGATGCGGCTTAAAGCGCGCCCGAATAGCTCGGGTGTCGCAATCTTTAAAGTGCACGTGCACAAATTTTTATGttg > 2:3561634/1‑149 (MQ=255) aGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGGCCAAAAAGCGCCCCCCGGCACATGTACAGCCCCCCACCGAGGCCGCGTAATTCGCGCCATAATAGCTCGGGGGGAGCATGCGTTCACGTGCCCGGGCACATCTTTGTGGGTTGgccg > 2:803543/1‑149 (MQ=255) cATTGCGCCCTCGCGGGGGGGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgcc < 1:1124381/150‑1 (MQ=255) gcgCCCGCGCGGTGGGGCGCCTGCCAAAAAATGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:2668209/148‑1 (MQ=255) gAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:2178463/150‑1 (MQ=255) cgCCCTCGCCGTGGGGCGCCTGCCAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:7107245/149‑1 (MQ=255) tCGACGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACCTGCACGTGCACATCTTTGTCTGTTAGCCTGCCTCGCCGTGCt > 2:6568573/1‑150 (MQ=255) gCCGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGt < 2:2730443/150‑1 (MQ=255) ccGTGGTGCGCCTGCGACAAAAATGCGCACCACGGAACTTTTACAGCCCGCAACGGATTCGGCTTAATGCGCGCCAAATTAGCTCGGGTGACTCATTCTTTAACGTGCACGTGCACATCATTGTCTGTTAGCCTGCCTCGCCGTGCTGtt > 1:6973386/1‑150 (MQ=255) gttggtggGCCTGCTAAAAAATGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTc < 1:4585291/148‑1 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa > 2:3756731/1‑150 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa > 2:5006731/1‑150 (MQ=255) tggggCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 1:6061213/150‑1 (MQ=255) gtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAcc > 1:1755570/1‑150 (MQ=255) cgcCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgc > 1:3589788/1‑150 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg > 1:8015478/1‑150 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:3007989/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 2:4860014/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:7270481/150‑1 (MQ=255) cTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg < 1:5554699/150‑1 (MQ=255) tGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc > 1:3527429/1‑150 (MQ=255) tGCCACAACAAGGCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGc < 1:1255858/150‑1 (MQ=255) tgACAAACAGGCGCACCACGGAACTGGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGa < 2:8535058/149‑1 (MQ=255) cGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGa < 2:5558992/150‑1 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:3360489/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:3220994/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt < 2:4362235/150‑1 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:6165489/1‑150 (MQ=255) caCAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt < 2:3850930/149‑1 (MQ=255) aCAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATg > 1:1648389/1‑150 (MQ=255) aCAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATg > 2:7330127/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 2:1757103/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 1:6828240/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 2:7565447/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 1:4219923/1‑150 (MQ=255) gcaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGc > 1:82623/3‑150 (MQ=255) aaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGc < 1:5223452/150‑1 (MQ=255) aaaGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGc > 1:7750580/1‑150 (MQ=255) acggCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGGGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCt < 1:5524930/148‑1 (MQ=255) aGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCtt > 2:861383/1‑150 (MQ=255) ggCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTg < 1:3900999/150‑1 (MQ=255) | CCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTGAC > NC_002947/3778210‑3778506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |