Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,975,715 G→T 5.6% L242M (CTG→ATG)  PP_3503 ← sigma‑54 dependent transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,975,7150GT 5.6% 1002.3 / 30.1 296L242M (CTG→ATG) PP_3503sigma‑54 dependent transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (146/133);  new base T (10/7);  total (156/140)
Fisher's exact test for biased strand distribution p-value = 6.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

GAAACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATC  >  NC_002947/3975566‑3975863
                                                                                                                                                     |                                                                                                                                                    
gAAACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAg                                                                                                                                                      <  1:7278843/150‑1 (MQ=255)
   aCGCCCTTGCTCGATGGCCCGCTCTAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTc                                                                                                                                                   <  2:7395704/150‑1 (MQ=255)
      cccTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGcc                                                                                                                                                <  1:5306771/150‑1 (MQ=255)
      cccTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGcc                                                                                                                                                <  1:8169414/150‑1 (MQ=255)
        cTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGa                                                                                                                                              >  2:902142/1‑150 (MQ=255)
         ttGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGAt                                                                                                                                             >  1:3448667/1‑150 (MQ=255)
          tGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGAtt                                                                                                                                            >  2:2381657/1‑150 (MQ=255)
             tCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtca                                                                                                                                         >  2:5264911/1‑150 (MQ=255)
             tCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtca                                                                                                                                         <  2:2033773/150‑1 (MQ=255)
             tCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtca                                                                                                                                         <  2:2514778/150‑1 (MQ=255)
              cGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtcat                                                                                                                                        <  2:5632323/150‑1 (MQ=255)
               gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtcatc                                                                                                                                       <  2:6437138/150‑1 (MQ=255)
               gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtcatc                                                                                                                                       <  1:8164247/150‑1 (MQ=255)
               gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATCTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtcatc                                                                                                                                       >  2:8427973/1‑150 (MQ=255)
                   gCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGa                                                                                                                                   <  2:711767/150‑1 (MQ=255)
                      cGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAAc                                                                                                                                <  2:3327051/150‑1 (MQ=255)
                        cTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACaa                                                                                                                              >  1:8564761/1‑150 (MQ=255)
                         tCAAGGTCCTCATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAAt                                                                                                                             <  1:7401313/150‑1 (MQ=255)
                           aaGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAAtgt                                                                                                                           >  1:8804331/1‑150 (MQ=255)
                                ccACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTgccgc                                                                                                                      <  2:4358437/150‑1 (MQ=255)
                                 cacaTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTgccgcc                                                                                                                     >  2:1069282/1‑150 (MQ=255)
                                  acaTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCa                                                                                                                    >  1:2883427/1‑150 (MQ=255)
                                  acaTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCa                                                                                                                    >  1:4202264/1‑150 (MQ=255)
                                  acaTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCa                                                                                                                    >  2:6723429/1‑150 (MQ=255)
                                    aTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATc                                                                                                                  <  2:1125899/150‑1 (MQ=255)
                                       ggTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGc                                                                                                               <  1:8971521/150‑1 (MQ=255)
                                           gccgccAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCt                                                                                                           >  1:9015509/1‑150 (MQ=255)
                                             cgccAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTc                                                                                                         >  2:6849247/1‑150 (MQ=255)
                                               ccAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGa                                                                                                       <  2:8360572/150‑1 (MQ=255)
                                               ccAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGa                                                                                                       <  1:6815407/150‑1 (MQ=255)
                                                    aCCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGc                                                                                                  <  2:4507831/150‑1 (MQ=255)
                                                      ccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGccc                                                                                                >  2:4670608/1‑150 (MQ=255)
                                                      ccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGccc                                                                                                >  2:1245246/1‑150 (MQ=255)
                                                        gTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCgg                                                                                              >  2:8333341/1‑150 (MQ=255)
                                                         tACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGt                                                                                             <  2:3814365/150‑1 (MQ=255)
                                                            aTCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCtt                                                                                          <  1:6290514/150‑1 (MQ=255)
                                                              ccACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTgc                                                                                        >  1:5508238/1‑150 (MQ=255)
                                                                aCCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTgcgc                                                                                      >  1:1423129/1‑150 (MQ=255)
                                                                aCCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTGCGATACGCCCGGTCTTgcgc                                                                                      >  2:7906097/1‑150 (MQ=255)
                                                                      aTGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGa                                                                                <  1:7354805/150‑1 (MQ=255)
                                                                      aTGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGa                                                                                >  1:4128040/1‑150 (MQ=255)
                                                                        gggCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGc                                                                              <  1:1339056/150‑1 (MQ=255)
                                                                         ggctggctGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCa                                                                             <  1:1079321/150‑1 (MQ=255)
                                                                            tggctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCg                                                                          >  1:3899875/1‑150 (MQ=255)
                                                                               ctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTa                                                                       <  1:3110945/150‑1 (MQ=255)
                                                                                tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGa                                                                                                       >  1:2419477/1‑117 (MQ=255)
                                                                                tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaa                                                                      >  2:1448328/1‑150 (MQ=255)
                                                                                tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaa                                                                      >  1:7138345/1‑150 (MQ=255)
                                                                                tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaa                                                                      <  1:2609267/150‑1 (MQ=255)
                                                                                tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaa                                                                      >  2:5379586/1‑150 (MQ=255)
                                                                                 gCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaaa                                                                     <  1:5991290/150‑1 (MQ=255)
                                                                                  ccacccccCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCACTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCGCCGGTAAAg                                                                    >  2:5063613/1‑150 (MQ=255)
                                                                                  ccacccacCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAg                                                                    >  2:2536175/1‑150 (MQ=255)
                                                                                    acccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgc                                                                  <  1:902142/150‑1 (MQ=255)
                                                                                    acccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgc                                                                  >  1:2641778/1‑150 (MQ=255)
                                                                                    acccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgc                                                                  >  1:1573717/1‑150 (MQ=255)
                                                                                      ccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcgc                                                                >  1:4213620/1‑150 (MQ=255)
                                                                                       cacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGcc                                                               <  2:7312728/150‑1 (MQ=255)
                                                                                              tCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCa                                                        <  1:7184403/150‑1 (MQ=255)
                                                                                                cctgtgCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCACTTCTCATg                                                      >  2:3643012/3‑150 (MQ=255)
                                                                                                      cTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGaa                                                <  2:4608688/150‑1 (MQ=255)
                                                                                                        tctcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACa                                              >  1:5065898/1‑150 (MQ=255)
                                                                                                        tctcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACa                                              <  2:3715167/150‑1 (MQ=255)
                                                                                                         ctgcTGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACaa                                             >  1:3374929/4‑149 (MQ=255)
                                                                                                          tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACatt                                            <  1:7686272/150‑3 (MQ=255)
                                                                                                          tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGt                                            >  1:3680956/1‑150 (MQ=255)
                                                                                                          tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGt                                            <  2:8842734/150‑1 (MQ=255)
                                                                                                            cTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTc                                          <  2:2155432/150‑1 (MQ=255)
                                                                                                            cTGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTc                                          <  2:4217277/150‑1 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCACGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGACCAGGTCg                                         >  2:6984955/1‑150 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGc                                                                                                  >  2:8225438/1‑93 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGc                                                                                                  <  1:8225438/93‑1 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                         >  1:8104982/1‑150 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                         >  2:3057285/1‑150 (MQ=255)
                                                                                                             tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                         >  1:1854964/1‑150 (MQ=255)
                                                                                                             tGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCg                                         >  2:2734974/1‑150 (MQ=255)
                                                                                                             tGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCg                                         >  1:6613928/1‑150 (MQ=255)
                                                                                                              gCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCgg                                        >  1:5154167/1‑150 (MQ=255)
                                                                                                               cAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGa                                       >  1:8720388/1‑150 (MQ=255)
                                                                                                                 acacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACt                                     >  1:1219504/5‑150 (MQ=255)
                                                                                                                   aaaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTgg                                   >  2:606387/1‑150 (MQ=255)
                                                                                                                    aaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGa                                  >  1:578925/1‑150 (MQ=255)
                                                                                                                    aaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGa                                  <  2:7488613/150‑1 (MQ=255)
                                                                                                                     aCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGAt                                 >  2:1320549/1‑150 (MQ=255)
                                                                                                                        cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                              >  1:2155657/1‑150 (MQ=255)
                                                                                                                        cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                              <  2:8604180/150‑1 (MQ=255)
                                                                                                                        cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                              >  2:3609451/1‑150 (MQ=255)
                                                                                                                         agcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAg                             <  1:97502/150‑1 (MQ=255)
                                                                                                                          gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                            >  2:8120796/1‑150 (MQ=255)
                                                                                                                          gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                            >  2:5699667/1‑150 (MQ=255)
                                                                                                                              gTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTc                        <  2:6651561/150‑1 (MQ=255)
                                                                                                                               ttGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCg                       <  2:3448667/150‑1 (MQ=255)
                                                                                                                                  gacTGGAATTCGATCGTCTGGTCTCCGATTTCATCATGAAAAAATGTGCCGCGATCGGCCGCTTCGATAGTCCCGGTCTTGGGCTGGTGTGCACATGTATAGGCGCCATTCTCATGTCCTAACTGTTCGGACTGGATCAAGTGCTCgggg                    <  2:7607527/148‑1 (MQ=255)
                                                                                                                                        aaTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcc              >  1:6471268/1‑150 (MQ=255)
                                                                                                                                         aTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGccc             <  1:4934512/150‑1 (MQ=255)
                                                                                                                                           tCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCg           >  2:1873221/1‑150 (MQ=255)
                                                                                                                                             cAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCa         <  2:1723083/150‑1 (MQ=255)
                                                                                                                                              aaCGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAg        >  2:3011913/1‑150 (MQ=255)
                                                                                                                                                 ggCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTg     >  1:8338064/1‑150 (MQ=255)
                                                                                                                                                  gCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGa    <  1:4451683/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GAAACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATC  >  NC_002947/3975566‑3975863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: