Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,975,775 T→A 5.7% K222* (AAG→TAG) ‡ PP_3503 ← sigma‑54 dependent transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,975,7750TA 5.7% 1004.2 / 33.3 296K222* (AAG→TAG) ‡PP_3503sigma‑54 dependent transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (140/139);  new base A (10/7);  total (150/146)
Fisher's exact test for biased strand distribution p-value = 6.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 300 total aligned reads displayed.

ATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCT  >  NC_002947/3975626‑3975923
                                                                                                                                                     |                                                                                                                                                    
aTCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCtt                                                                                                                                                      >  2:3808221/1‑150 (MQ=255)
  ccACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTgc                                                                                                                                                    >  1:5508238/1‑150 (MQ=255)
       ggTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTgg                                                                                                                                               <  2:1253889/150‑1 (MQ=255)
       ggTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTgg                                                                                                                                               <  1:4539331/150‑1 (MQ=255)
        gTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGt                                                                                                                                              >  1:9138076/1‑150 (MQ=255)
          aTGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGa                                                                                                                                            <  1:7354804/150‑1 (MQ=255)
               ctggctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCAcc                                                                                                                                       <  1:8476848/150‑1 (MQ=255)
                    tgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaa                                                                                                                                  >  1:7750255/1‑150 (MQ=255)
                     gCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaaa                                                                                                                                 <  1:6426503/150‑1 (MQ=255)
                     gCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTaaa                                                                                                                                 <  1:994068/150‑1 (MQ=255)
                        acccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgc                                                                                                                              >  1:2641778/1‑150 (MQ=255)
                         cccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcg                                                                                                                             >  2:206213/1‑150 (MQ=255)
                          ccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcgc                                                                                                                            <  2:6521236/150‑1 (MQ=255)
                          ccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcgc                                                                                                                            >  2:7467150/1‑150 (MQ=255)
                          ccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcgc                                                                                                                            >  1:4213606/1‑150 (MQ=255)
                          ccacccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGgcgc                                                                                                                            >  2:2323094/1‑150 (MQ=255)
                            acccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGccc                                                                                                                          >  2:2516732/1‑150 (MQ=255)
                             cccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCt                                                                                                                         >  2:1455400/1‑150 (MQ=255)
                              ccGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCtt                                                                                                                        >  1:8875305/1‑150 (MQ=255)
                               cGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                       <  1:2632244/150‑1 (MQ=255)
                               cGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                       <  2:3574630/150‑1 (MQ=255)
                               cGCTCGAGGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                       <  2:7309969/150‑1 (MQ=255)
                                 cTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtctc                                                                                                                     <  1:3098447/150‑1 (MQ=255)
                                  tCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCa                                                                                                                    <  1:7184403/150‑1 (MQ=255)
                                    cctgtgCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCACTTCTCATg                                                                                                                  >  2:3643012/3‑150 (MQ=255)
                                          cTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGaa                                                                                                            >  2:8427292/1‑150 (MQ=255)
                                           ttCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAAc                                                                                                           <  1:6628714/150‑1 (MQ=255)
                                            tctcCTTCAAGAAACGCAGCAAGTTGTCCTGAAATTCCAACGGCTGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCGGCTTCGATACGACCGGTCTTGCGCTGGTTAGCACCGGTAAAGGCGCCCTTCTCATGGACGAACa                                                                                                          <  1:4961224/150‑1 (MQ=255)
                                            tctcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACa                                                                                                          >  1:5065898/1‑150 (MQ=255)
                                              tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGt                                                                                                        <  2:8842734/150‑1 (MQ=255)
                                                 tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCACGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGACCAGGTCg                                                                                                     >  2:6984955/1‑150 (MQ=255)
                                                 tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                     >  1:8104982/1‑150 (MQ=255)
                                                 tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                     >  1:1854964/1‑150 (MQ=255)
                                                 tGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCg                                                                                                     >  2:7927699/1‑150 (MQ=255)
                                                  gCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCgg                                                                                                    >  1:5154167/1‑150 (MQ=255)
                                                  gCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCgg                                                                                                    >  2:4631183/1‑150 (MQ=255)
                                                   caacacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGa                                                                                                   <  1:9009803/144‑1 (MQ=255)
                                                   cAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGa                                                                                                   >  1:8720388/1‑150 (MQ=255)
                                                    aaGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGAc                                                                                                  >  2:1155571/1‑150 (MQ=255)
                                                    aaGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGAAAAGGCGCCCTTCTCATGGCCGAACAGATCGGAc                                                                                                  >  1:5852322/1‑150 (MQ=255)
                                                     aGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACt                                                                                                 <  2:1909238/150‑1 (MQ=255)
                                                      cacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACtc                                                                                                <  2:6055493/147‑2 (MQ=255)
                                                        aaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGa                                                                                              >  1:578901/1‑150 (MQ=255)
                                                         aCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACTCGAt                                                                                             <  1:8164527/150‑1 (MQ=255)
                                                         aCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACTCGAt                                                                                             >  2:3714159/1‑150 (MQ=255)
                                                            cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                          <  2:5562707/150‑1 (MQ=255)
                                                            cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                          <  2:8604180/150‑1 (MQ=255)
                                                            cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                          <  1:4183688/150‑1 (MQ=255)
                                                            cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                          <  1:145573/150‑1 (MQ=255)
                                                             agcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAg                                                                                         >  2:8561027/1‑150 (MQ=255)
                                                             agcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAg                                                                                         >  2:4284432/1‑150 (MQ=255)
                                                              gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                                                                                        >  2:5699608/1‑150 (MQ=255)
                                                                    tGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCgg                                                                                  <  1:7386600/150‑1 (MQ=255)
                                                                     ggCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCggg                                                                                 <  2:6665848/150‑1 (MQ=255)
                                                                      gacTGGAATTCGATCGTCTGGTCTCCGATTTCATCATGAAAAAATGTGCCGCGATCGGCCGCTTCGATAGTCCCGGTCTTGGGCTGGTGTGCACATGTATAGGCGCCATTCTCATGTCCTAACTGTTCGGACTGGATCAAGTGCTCgggg                                                                                <  2:7607527/148‑1 (MQ=255)
                                                                       ccTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGa                                                                               <  1:1250904/150‑1 (MQ=255)
                                                                        cTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGAt                                                                              >  2:187067/1‑150 (MQ=255)
                                                                         tGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATAGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATc                                                                             <  1:3375072/150‑1 (MQ=255)
                                                                          gCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCg                                                                            >  2:8274883/1‑150 (MQ=255)
                                                                            aaTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACACTGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcc                                                                          <  2:7158074/150‑1 (MQ=255)
                                                                            aaTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcc                                                                          >  1:6471268/1‑150 (MQ=255)
                                                                              ttCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcccc                                                                        <  2:672588/150‑1 (MQ=255)
                                                                              ttCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcccc                                                                        <  2:2429185/150‑1 (MQ=255)
                                                                                 cAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCa                                                                     <  2:3394926/150‑1 (MQ=255)
                                                                                  aaCGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAg                                                                    >  2:3011913/1‑150 (MQ=255)
                                                                                          gacGCCGATAACATCAAGAAACAATGAGCCGACATCGGACGCTTCGATACGCCCGCTCTTGAGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCAAGGCCGAACAGATCGGACTGGATCAAGTGCTCTGCTATAGCCCCCCAGTTGATagc                                                            >  2:4581259/3‑150 (MQ=255)
                                                                                          gTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATcgc                                                            <  1:2111153/150‑1 (MQ=255)
                                                                                          gTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTCGATCAACTGCGGGGCGATCCCCGAGCACTTGATcca                                                            <  1:6824864/150‑3 (MQ=38)
                                                                                            cGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGa                                                          <  1:5264911/150‑1 (MQ=255)
                                                                                            cGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGa                                                          <  2:8271668/150‑1 (MQ=255)
                                                                                             gCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGAt                                                         >  1:1711569/1‑150 (MQ=255)
                                                                                             gCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGAt                                                         >  2:5021519/1‑150 (MQ=255)
                                                                                                 aTTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAAc                                                     <  1:3788653/150‑1 (MQ=255)
                                                                                                  tttCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACg                                                    >  1:4771845/1‑150 (MQ=255)
                                                                                                   ttCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACgg                                                   <  1:436505/150‑1 (MQ=255)
                                                                                                       tcaAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGgctgc                                               >  1:2905357/1‑150 (MQ=255)
                                                                                                         aaGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTc                                             <  1:8347540/150‑1 (MQ=255)
                                                                                                          aGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCg                                            >  1:7990798/1‑150 (MQ=255)
                                                                                                          aGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCg                                            >  2:900683/1‑150 (MQ=255)
                                                                                                          aGAAACAATGTGCAGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCg                                            >  1:1206368/1‑150 (MQ=255)
                                                                                                               cAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCg                                       >  2:2837659/1‑150 (MQ=255)
                                                                                                                  tgtgCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTg                                    <  2:2613041/150‑1 (MQ=255)
                                                                                                                     gccgccATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGa                                 >  1:8246876/1‑150 (MQ=255)
                                                                                                                     gccgccATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGa                                 <  1:1375120/150‑1 (MQ=255)
                                                                                                                      ccgccATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGAc                                >  2:5295863/1‑150 (MQ=255)
                                                                                                                      ccgccATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGAc                                >  1:587462/1‑150 (MQ=255)
                                                                                                                           aTCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCg                           <  1:7046991/150‑1 (MQ=255)
                                                                                                                            tCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCgg                          <  2:3127442/150‑1 (MQ=255)
                                                                                                                             cGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGt                         <  2:3056193/150‑1 (MQ=255)
                                                                                                                                  gCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAg                    >  2:5780033/1‑150 (MQ=255)
                                                                                                                                  gCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAg                    <  2:1083989/150‑1 (MQ=255)
                                                                                                                                     tCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTg                 <  1:2536175/150‑1 (MQ=255)
                                                                                                                                      cGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTgc                <  1:2323094/150‑1 (MQ=255)
                                                                                                                                        aTACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTgcgc              <  2:4208885/150‑1 (MQ=255)
                                                                                                                                         tACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTgcgcg             >  2:6174114/1‑150 (MQ=255)
                                                                                                                                           cGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGcc           <  2:9015668/150‑1 (MQ=255)
                                                                                                                                            gcgcGGTCGTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGTCCGAACAGTTCGGACTTGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCTCGATGAACGGCTGCTCGCTTCGTTGCGTCTGGCGGTGCAAGGTGCGCGgca          <  2:5376090/147‑1 (MQ=255)
                                                                                                                                            gCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGcca          >  1:759863/1‑150 (MQ=255)
                                                                                                                                             cccGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGccac         >  1:4007137/1‑150 (MQ=255)
                                                                                                                                                 gTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGc     <  1:1069282/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCT  >  NC_002947/3975626‑3975923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: