Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,975,806 C→T 6.5% E211E (GAG→GAA PP_3503 ← sigma‑54 dependent transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,975,8060CT 6.5% 805.4 / 29.9 259E211E (GAG→GAAPP_3503sigma‑54 dependent transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (123/119);  new base T (10/7);  total (133/126)
Fisher's exact test for biased strand distribution p-value = 6.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 271 total aligned reads displayed.

CGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGCTCTCCCCGCGGATCAGCAC  >  NC_002947/3975657‑3975955
                                                                                                                                                     |                                                                                                                                                     
cGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                                                       <  2:3574630/150‑1 (MQ=255)
cGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                                                       <  1:2632476/150‑1 (MQ=255)
cGCTCGAGGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtc                                                                                                                                                       <  2:7309969/150‑1 (MQ=255)
  cTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtctc                                                                                                                                                     <  1:5397973/150‑1 (MQ=255)
  cTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtctc                                                                                                                                                     <  1:8806394/150‑1 (MQ=255)
  cTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtctc                                                                                                                                                     <  1:3624446/150‑1 (MQ=255)
  cTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTtctc                                                                                                                                                     <  1:3098447/150‑1 (MQ=255)
   tCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCa                                                                                                                                                    <  1:7184403/150‑1 (MQ=255)
   tCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCa                                                                                                                                                    <  2:8356026/150‑1 (MQ=255)
     cctgtgCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCACTTCTCATg                                                                                                                                                  >  2:3643012/3‑150 (MQ=255)
           gccctgcTGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGaa                                                                                                                                            >  1:5807545/7‑150 (MQ=255)
           cTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGaa                                                                                                                                            <  2:4608688/150‑1 (MQ=255)
             tctcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACa                                                                                                                                          >  1:5065960/1‑150 (MQ=255)
              ctgcTGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACaa                                                                                                                                         >  1:3374929/4‑149 (MQ=255)
               tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACatt                                                                                                                                        <  1:7686272/150‑3 (MQ=255)
               tcCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGt                                                                                                                                        <  2:8842734/150‑1 (MQ=255)
                 cTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTc                                                                                                                                      <  2:2155432/150‑1 (MQ=255)
                  tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                                                     >  1:1854964/1‑150 (MQ=255)
                  tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                                                     >  2:3057285/1‑150 (MQ=255)
                  tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                                                     >  1:93679/1‑150 (MQ=255)
                  tGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATAGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTCAAGGCGCCCTTCTCATGGCCGAACAGTTCg                                                                                                                                     >  1:8104994/1‑150 (MQ=255)
                  tGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCg                                                                                                                                     >  2:7927699/1‑150 (MQ=255)
                  tGCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCg                                                                                                                                     >  2:2734974/1‑150 (MQ=255)
                   gCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCgg                                                                                                                                    >  1:5154167/1‑150 (MQ=255)
                   gCAACACACGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCgg                                                                                                                                    >  2:4631183/1‑150 (MQ=255)
                    caacacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGa                                                                                                                                   <  1:9009803/144‑1 (MQ=255)
                    cAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGa                                                                                                                                   <  1:2541753/150‑1 (MQ=255)
                     aaGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGAc                                                                                                                                  >  2:1155571/1‑150 (MQ=255)
                      acacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACt                                                                                                                                 >  1:1219504/5‑150 (MQ=255)
                      aGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACt                                                                                                                                 <  2:1909238/150‑1 (MQ=255)
                       cacaCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACtc                                                                                                                                <  2:6055493/147‑2 (MQ=255)
                        aaaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTgg                                                                                                                               <  1:8189113/150‑1 (MQ=255)
                        aaaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTgg                                                                                                                               >  2:1052459/1‑150 (MQ=255)
                         aaCGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGa                                                                                                                              >  2:4451683/1‑150 (MQ=255)
                          aCGCAGCAAGCGCGTCTGCGCCTCCATTGGCATATCGCCGATTTCATCAAGAAACAGCGTGCCGCCATTGGCTTGTTCAAAACGTCCGCTTGAACGGTTCTGTGCGCCAGTAAAGGCACCCTTTTCATGGCCGAACAATTCGGACTCGAt                                                                                                                             <  1:8164499/150‑1 (MQ=255)
                             cagcaAGTTTGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                                                          <  2:890841/150‑1 (MQ=255)
                             cagcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCaa                                                                                                                          <  1:145573/150‑1 (MQ=255)
                              agcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAg                                                                                                                         >  2:8561027/1‑150 (MQ=255)
                               gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                                                                                                                        >  1:7548200/1‑150 (MQ=255)
                               gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                                                                                                                        >  2:8120796/1‑150 (MQ=255)
                               gcaAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGt                                                                                                                        >  2:5699667/1‑150 (MQ=255)
                                      ggCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCggg                                                                                                                 <  2:6665848/150‑1 (MQ=255)
                                        ccTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGa                                                                                                               >  2:7603920/1‑150 (MQ=255)
                                        ccTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGa                                                                                                               <  1:1250904/150‑1 (MQ=255)
                                         cTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCgggg                                                                                                                <  2:4187767/148‑1 (MQ=255)
                                         cTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCgggg                                                                                                                >  1:4187767/1‑148 (MQ=255)
                                         cTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGAt                                                                                                              >  1:5050541/1‑150 (MQ=255)
                                         cTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGAt                                                                                                              >  2:187067/1‑150 (MQ=255)
                                          tGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATc                                                                                                             >  1:2365648/1‑150 (MQ=255)
                                             aaTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcc                                                                                                          >  1:6471268/1‑150 (MQ=255)
                                              aTTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGccc                                                                                                         <  1:4934512/150‑1 (MQ=255)
                                               ttCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcccc                                                                                                        <  1:1416901/150‑1 (MQ=255)
                                               ttCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGcccc                                                                                                        <  2:672588/150‑1 (MQ=255)
                                                  cAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCa                                                                                                     <  2:3394926/150‑1 (MQ=255)
                                                   aaCGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAg                                                                                                    >  2:3011913/1‑150 (MQ=255)
                                                       gCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGa                                                                                                <  1:4451683/150‑1 (MQ=255)
                                                         aGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATc                                                                                              <  2:4270737/150‑1 (MQ=255)
                                                           gTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATcgc                                                                                            <  1:2111153/150‑1 (MQ=255)
                                                           gTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATcgc                                                                                            <  2:7124751/150‑1 (MQ=255)
                                                           gTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTCGATCAACTGCGGGGCGATCCCCGAGCACTTGATcca                                                                                            <  1:6824864/150‑3 (MQ=38)
                                                             cGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGa                                                                                          <  1:5264911/150‑1 (MQ=255)
                                                              gCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGAt                                                                                         >  1:1711616/1‑150 (MQ=255)
                                                              gCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGAt                                                                                         >  2:5021519/1‑150 (MQ=255)
                                                                  aTTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAAc                                                                                     >  2:3313518/1‑150 (MQ=255)
                                                                  aTTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAAc                                                                                     <  1:3788653/150‑1 (MQ=255)
                                                                  aTTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGATGATCGCGATGAAc                                                                                     >  1:5864668/1‑150 (MQ=255)
                                                                   tttCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACg                                                                                    >  1:4771822/1‑150 (MQ=255)
                                                                    ttCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACgg                                                                                   <  2:5538682/150‑1 (MQ=255)
                                                                    ttCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCAGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACgg                                                                                   <  2:3756091/150‑1 (MQ=255)
                                                                     tcatcaAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGgc                                                                                  <  1:8427292/150‑1 (MQ=255)
                                                                       atcaAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGgctg                                                                                >  2:7263797/1‑150 (MQ=255)
                                                                       atcaAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGgctg                                                                                >  2:2363794/1‑150 (MQ=255)
                                                                        tcaAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGgctgc                                                                               >  1:2905357/1‑150 (MQ=255)
                                                                          aaGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTc                                                                             <  1:6979790/150‑1 (MQ=255)
                                                                          aaGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTc                                                                             <  1:8347540/150‑1 (MQ=255)
                                                                          aaGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTc                                                                             >  2:8567388/1‑150 (MQ=255)
                                                                          aaGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTc                                                                             >  2:3908462/1‑150 (MQ=255)
                                                                           aGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCg                                                                            >  2:5354916/1‑150 (MQ=255)
                                                                           aGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCg                                                                            >  1:7990798/1‑150 (MQ=255)
                                                                            gAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGc                                                                           <  2:1220053/150‑1 (MQ=255)
                                                                            gAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGc                                                                           <  1:5782494/150‑1 (MQ=255)
                                                                            gAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGc                                                                           >  2:8273898/1‑150 (MQ=255)
                                                                               aCAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGc                                                                        <  2:8441491/150‑1 (MQ=255)
                                                                                cAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCg                                                                       >  1:405216/1‑150 (MQ=255)
                                                                                cAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCg                                                                       >  2:2837659/1‑150 (MQ=255)
                                                                                          ccATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTgg                                                             >  2:2479897/1‑150 (MQ=255)
                                                                                              cGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGt                                                         <  1:7381522/150‑1 (MQ=255)
                                                                                                      tCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTg                                                 <  1:6434644/150‑1 (MQ=255)
                                                                                                            cGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGcc                                           <  2:9015638/150‑1 (MQ=255)
                                                                                                                  gTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGc                                     <  1:1069282/150‑1 (MQ=255)
                                                                                                                       gcgcTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCttt                                <  1:2516732/150‑1 (MQ=255)
                                                                                                                        cgcTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTg                               >  2:5792183/1‑150 (MQ=255)
                                                                                                                               gAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGc                        >  1:4695753/1‑150 (MQ=255)
                                                                                                                                  cACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGc                     <  2:872777/150‑1 (MQ=255)
                                                                                                                                    ccGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTTGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGctc                   >  2:6232139/1‑150 (MQ=255)
                                                                                                                                    ccGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGctc                   >  2:6108225/1‑150 (MQ=255)
                                                                                                                                            ggCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAg                                                    >  2:6617009/1‑109 (MQ=255)
                                                                                                                                            ggCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAg                                                    <  1:6617009/109‑1 (MQ=255)
                                                                                                                                               gcCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGCTCTCCCCGCGGAt        >  1:8621671/1‑150 (MQ=255)
                                                                                                                                                cccTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGCTCTCCCCGCGGATc       <  2:3680956/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGGTAAAGGCGCCCTTCTCATGGCCGAACAGTTCGGACTGGATCAAGTGCTCGGGGATCGCCCCGCAGTTGATCGCGATGAACGGCTGCTCGCTGCGTTGCGACTGGCGGTGCAAGGTGCGCGCCACCAGCTCTTTGCCGGTGCCGCTCTCCCCGCGGATCAGCAC  >  NC_002947/3975657‑3975955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: