| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,051,977 | T→G | 6.4% | L15R (CTG→CGG) ‡ | oprB‑III → | carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,051,977 | 0 | T | G | 6.4% | 726.9 / 20.9 | 225 | L15R (CTG→CGG) ‡ | oprB‑III | carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base T (153/56); new base G (4/12); total (157/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTG > NC_002947/4051828‑4052126 | aaaCCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGATCGGGCTTGCCCGCGAATTCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCCCAATTAGCAACACCCCCACCCAGCGGcgggcccaggccc > 1:4550575/1‑149 (MQ=37) aaaCCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCa < 2:3610779/150‑1 (MQ=255) aaCCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACCCGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAg < 2:5379001/150‑1 (MQ=255) aaCCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAg < 2:6348965/150‑1 (MQ=255) ccGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTTGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGca < 1:7778849/150‑1 (MQ=255) ccGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGca < 1:6860414/150‑1 (MQ=255) cgcgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcac < 2:7855588/150‑1 (MQ=255) cgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACACGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAgcagca < 1:4511395/150‑1 (MQ=255) cgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCACAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAgcagca < 1:1495748/150‑1 (MQ=255) tCGCCTGCTTCGCGGGCATGCCCGCTCCTACAAGGCCCGTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGGTGCTGGCCAGGGCCAgcagcagg < 1:7147451/150‑3 (MQ=38) gCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGc < 2:8433992/150‑1 (MQ=255) ccTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCCAACACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAgcagcagggtg < 1:2799671/150‑6 (MQ=38) cTGCTTCGCGGGCAAGCCCCCTCCGACAAGGCCCCTGTAGGAGCGGGCGTGCCCGCGAATGCCCCTCAAAGACAACCCCAGATTCAGTAATGCCATACCCAATTAGCAACACCCCCACCCAGCTGCTGGCCCGGGCCACCACCACAGccc > 2:8620344/1‑150 (MQ=255) gCTTCGCGGGCAAGCCCGCTCCTACACGGCCCCTGTTGGTGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCtt < 1:1056442/150‑1 (MQ=255) ttCGCGGGCAAGCCCGCTCCTACACGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGc < 2:6585918/150‑1 (MQ=255) cAAGCCCGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcgacg > 1:249795/1‑150 (MQ=255) gCCCGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtc > 2:8349528/1‑150 (MQ=255) gCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtc > 2:8151194/1‑150 (MQ=255) cccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 2:5836120/1‑150 (MQ=255) cccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 2:6378087/1‑150 (MQ=255) ccGCTCCTCCAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCGGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc < 2:6934214/150‑1 (MQ=255) ccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 1:3000145/1‑150 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 2:7785952/1‑150 (MQ=255) cGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 2:6132906/1‑150 (MQ=255) cGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 1:3916925/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:7030600/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:4781959/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:3417376/1‑150 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 2:6262640/1‑150 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 1:5537785/1‑150 (MQ=255) tCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 1:4935124/1‑147 (MQ=255) tCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 1:4109491/1‑150 (MQ=255) tCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 1:3467861/1‑150 (MQ=255) cTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAcc > 1:5863614/1‑150 (MQ=255) cTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAcc > 1:3942321/1‑150 (MQ=255) tACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAccc > 1:7505150/1‑150 (MQ=255) aGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcag > 2:4055530/1‑150 (MQ=255) gCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcagca > 2:1759701/1‑150 (MQ=255) ccccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAc < 2:2284580/150‑1 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc > 2:7428732/1‑150 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc > 1:909564/1‑150 (MQ=255) cccTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAcc > 1:4885953/1‑150 (MQ=255) tGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTg > 2:4657489/1‑150 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGa < 1:9098743/150‑1 (MQ=255) aGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCAATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGTCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGt < 1:2831800/150‑1 (MQ=255) cTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTgg < 1:5836120/150‑1 (MQ=255) cccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcg > 1:5045650/1‑150 (MQ=255) ccGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcgg > 1:2522004/1‑150 (MQ=255) cgcgAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcggc > 1:2042115/1‑150 (MQ=255) gcgAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGAAGCACCCTGACCGGTGACTGGGGCGGcc > 1:8668308/1‑150 (MQ=255) ccccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCa < 1:6378087/150‑1 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCAt > 1:5080986/1‑150 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCAt > 1:7068065/1‑150 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCAt > 1:6576008/1‑150 (MQ=255) cTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCa > 1:5998532/1‑150 (MQ=255) cAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAAc < 1:3420612/150‑1 (MQ=255) aaaGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACt > 1:2146083/1‑150 (MQ=255) aCAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGc < 1:8536428/83‑1 (MQ=255) aCAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaa > 2:499241/1‑150 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaaga > 2:4676808/1‑150 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaaga > 2:750030/1‑150 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCAGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaaga > 2:2658862/1‑150 (MQ=255) aCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCgaagag > 2:328593/1‑149 (MQ=255) cccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGaagaag > 1:5266472/1‑150 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 2:1548171/1‑150 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 2:7700641/1‑150 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAagaaga > 1:884226/1‑150 (MQ=255) cGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTACTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCACGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGAc > 1:6784974/1‑150 (MQ=255) ttCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGt > 1:2303491/1‑150 (MQ=255) tGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGTCCTGCGCCATCAACTCGAAGAAGACGGCGTCaa < 2:8809492/150‑1 (MQ=255) tGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCaa < 2:4229557/150‑1 (MQ=255) tGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGCCTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAgggca > 1:6204107/1‑146 (MQ=255) cATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCg > 2:3055497/1‑150 (MQ=255) aTCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCgg > 1:5318725/1‑150 (MQ=255) aTCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCgg > 2:5185490/1‑150 (MQ=255) tCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGc > 2:3828846/1‑150 (MQ=255) cGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGa > 2:2831827/1‑150 (MQ=255) gCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGAc > 1:1345562/1‑150 (MQ=255) aTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTAc > 1:481789/1‑150 (MQ=255) aTCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt > 1:4626648/1‑150 (MQ=255) aTCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt < 1:5303660/150‑1 (MQ=255) aTCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt < 2:2136321/150‑1 (MQ=255) aTCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt < 2:7669113/150‑1 (MQ=255) aCCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGaa > 1:1601219/1‑150 (MQ=255) ccccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAAc > 1:3290879/1‑150 (MQ=255) cccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAAcc < 2:4460336/150‑1 (MQ=255) cccTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCt < 1:7924392/150‑1 (MQ=255) tgctgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACa > 1:3755983/1‑150 (MQ=255) tgctgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACa > 1:7209841/1‑150 (MQ=255) gtgctgGCCAGGGCCAGCAGCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAAc > 1:4664794/2‑150 (MQ=255) ctggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGcc > 2:6727169/1‑150 (MQ=255) ctggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGcc > 1:5578768/1‑150 (MQ=255) ctggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGcc > 2:1154129/1‑150 (MQ=255) ctggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGcc > 1:6112620/1‑150 (MQ=255) tggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGccc > 2:3764103/1‑150 (MQ=255) ccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGccgaac > 1:8595742/1‑146 (MQ=255) ccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACg > 1:5626734/1‑150 (MQ=255) ccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACg < 1:9030748/150‑1 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACgg > 2:5555999/1‑150 (MQ=255) tggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTg > 2:8746026/1‑150 (MQ=255) | CCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGTG > NC_002947/4051828‑4052126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |