| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,081,398 | T→G | 6.3% | intergenic (‑236/+148) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,081,398 | 0 | T | G | 6.3% | 680.7 / 3.7 | 232 | intergenic (‑236/+148) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (100/108); new base G (20/2); total (121/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.91e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
GCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTT > NC_002947/4081249‑4081547 | gcgATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGT < 1:1146598‑M1/150‑1 (MQ=255) agcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTc > 1:6244706‑M1/131‑150 (MQ=255) agcggccgtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTc > 1:8980985‑M1/131‑150 (MQ=255) gtgtgtgcatgtccggcctgcgcccggccaacctgcaacgggttgccgaagcgttcgctgccgttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCGTgcggcgcggaaa < 2:1875033‑M1/27‑5 (MQ=255) aCGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGCTAggg > 2:2348777/1‑150 (MQ=255) ggTTGCACGTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTGGTCTGTACAAGCGGAAGGCATTGCTGGTGTCGTTCGGTTGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGGCTGTGGGTGCGGGCTTGCTTCTGGATAggggctctat < 2:8339168/150‑8 (MQ=255) tGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 1:3398717/150‑1 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 2:2798273/150‑1 (MQ=255) cACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 2:3175173/150‑1 (MQ=255) aCTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcc > 1:4015743/1‑150 (MQ=255) cTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccc < 1:7996863/150‑1 (MQ=255) gCGAAGCCCCTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctat < 1:7299669/150‑4 (MQ=255) cGAAGCCCTGTTCCGAGGAGCGGTTGCACTTGTCTTTACCCGCGGAAGGCATTGCTGGTGTCGCTCGGTGGAATGGAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCTTTGCGGccctatc < 2:7520074/150‑5 (MQ=255) gAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCatcg < 1:211079/150‑4 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGGTAGGGCCGCAAAGCGGgccccccaa > 1:8080008/1‑145 (MQ=255) aGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAt < 1:3814357/150‑1 (MQ=255) gCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAtt < 1:8644188/150‑1 (MQ=255) ttttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAg < 2:7978562/150‑1 (MQ=255) ttttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCCCGGTAGGGCCGCAAAGCGGCCCCCCCAAATTCAg > 2:1573330/1‑150 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGTCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 2:7276851/150‑1 (MQ=255) cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGCAAGTTCAGCGGCa > 2:7391999/1‑150 (MQ=255) cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCa > 1:4187216/1‑150 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCaa > 1:6981646/1‑150 (MQ=255) aggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCaaa < 1:2602820/150‑1 (MQ=255) gagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGc < 2:7113607/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:3737752/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:6301440/150‑1 (MQ=255) gTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCaa > 1:8890186/1‑150 (MQ=255) cACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGGCGCAAAGCGGCCCCAGCAATTTAAGCGGCACAGCTGCCATCGt > 2:5479500/1‑150 (MQ=39) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctg < 1:141260‑M1/150‑51 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTa < 1:4152675/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAg < 1:9105112/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgg < 1:450392/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATTCAGCGGCAAAGCGGCAAAAGTAgg > 1:7594764/1‑150 (MQ=38) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGTCGCGAt > 2:4243220/1‑94 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATATCAGCGGCAAAGCGGCAATCGTAGGGgcgc > 2:3599535/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTGCAAACGTAGGGgcgc > 2:8972103/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGTTAGGGCCGCCAAGCCGCCCCCGCAAATTCACCGGCAAAGCTGCCAACCTAGGGgcgc > 2:4768256/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGGTTGGGCCGCAAAGCGGCCCCCCCAAAATCACCGGCAAACCTGCAAACGTAGGGgggc > 2:3320540/1‑150 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTcc < 2:5555087/150‑1 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCCGCAAATTCATCGGCAAAGCTGCAAAAGTAGGGGCGCTCCGc > 2:6528419/1‑150 (MQ=38) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccc < 1:2999864‑M1/150‑68 (MQ=255) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTTCGTCGCGATAGGGCCGCAAAACGGCCCCACCAAATTAAGCGGCAAAACTGCAATAGTAGGGGCGCGCCGCAccca > 2:3442109/1‑149 (MQ=38) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGGGATTGGGCCGCAAAGCGGCCCCCGCAATTACAGCCGCAAAGCTGCAATCGAAGGGGCGCTCCGCAcccg > 1:5285633/1‑149 (MQ=38) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGCTAGGGCCGCAAAGCGGCCCCAGCCAATTCAGCGGCAAAGCTGCAAACGTAGGGGCGCTCCGCccccg > 2:5888187/1‑149 (MQ=38) aaGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCtt < 1:5982796/150‑1 (MQ=255) ggCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTt > 2:4469978‑M2/1‑149 (MQ=255) ggCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCAAGCGTCCCCATAATGCCCCAAAACGCCCCCAGCAAATTAAGCGGCAAAACAGAAAAAGTACGGGCGCACCCCCCCCattt > 2:1180419/1‑150 (MQ=255) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtc > 2:8890186‑M2/1‑148 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcg > 1:5842068‑M2/1‑147 (MQ=255) tttgCTGTGGTCGATCGGTGGAATGTAGCGGCCGGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgc > 1:8145897‑M2/2‑146 (MQ=255) gtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTcgc > 1:5027794‑M1/54‑150 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCTTGCGTGGCGATAGGGCCGCAAATCGGCCCCAGCAATTTAAGCGGCAAATCTGCAATAGTTGGGGGGCTCCGCACCCATTtagc < 2:3772292‑M2/150‑5 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 1:4389114/107‑1 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa > 2:4389114/1‑107 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgc > 1:724769‑M2/1‑146 (MQ=255) ttGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAgggg < 2:5754964/130‑1 (MQ=255) tGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcga > 2:2640343‑M2/1‑144 (MQ=255) tGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcga > 2:2640339‑M2/1‑144 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgac < 2:8216180‑M1/150‑77 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTCtcgcgac > 2:2253155‑M2/1‑143 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCATGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCCGCCCCAGCAAATTCAGCCGCAAAGCTGCCAACGTAGGGGCGCGCCGCACCCAGTtcgcgcc < 2:611104‑M2/150‑8 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGGGGGGCGGGAGGGCCGCAAACCGGGCCCCCCAAATTCACCGGCAAACCAGCAAAAGGATGGGCGCGCCGCCCCCGTTTCGcgccgc > 1:2883303/1‑150 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa > 1:3328000‑M2/1‑139 (MQ=255) gccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa > 2:7627839‑M1/47‑150 (MQ=255) gccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCaa > 2:5329622‑M1/47‑150 (MQ=255) gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaagg < 1:88840‑M1/150‑83 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 1:3607437‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggc > 2:5336156‑M2/1‑136 (MQ=255) gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCGTTtcgcgacgcaaggccg < 2:8135124‑M2/150‑17 (MQ=255) aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggctag < 1:4599422‑M2/150‑18 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGGTAGGGCCGCAAAGCGGCCCCAGCAATTTAAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCATTtcgcgacgcaaggccgcgccc < 2:2186871‑M2/150‑22 (MQ=255) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:6809258/150‑1 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGGCGCGATAGGGCCGCAAAGCGGCCCCCCCAAATTCAGCGGCAAAGCTGCAAACGTAGGGGCGCTCCGCACCCGTTTCGCGACGCACCGCCGCGCCCACAAACTCCa > 2:5821674/1‑150 (MQ=25) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCCCAGCGGCCCCAGCAATGTCAGCGGCCCAGCGGCCAAGGTTGGGGCGCGCCGCACCCGTTTGGCGCCGCCAGGCCGCGCCCCCCAAGTCCa > 2:7050613/1‑150 (MQ=21) tGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCCTCGCGATAGGGCCCCAAAGCCGCCCCACCAAAATAACCCGCAAAGCAGCAAAAGTATGGGCCCTCCCCAACCATTTAGCGAACCAATGCCCCACCCCCAAACACCaaacccc > 2:8461627/1‑145 (MQ=255) tGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCCGCGCCCTAGGGCCCCAAACCGGCCCCAGCCAATTAAGCCGCCAAACGGCAATCGGAGGGGCGCGCCGCCCCCGTTTAGCGACCCAAGGCCGCTCCCACAAACTACAAccccc > 2:1938835/1‑147 (MQ=255) cgcCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAGCCGCCCCAGCAAATTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACCAAGTCCAACCGcccccc > 2:6086633/1‑150 (MQ=37) gcggcCGGTGGGCGCGGCGTTGCGTCGCGATCGGGCCGCAACGCGGCCCCAGCAATGTCAGCGGCAACGCTGCAATCGTCGGGGCGCTCCGCACCCTTTGCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAgggg < 2:8669461/150‑1 (MQ=255) cggcCGGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTCCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGc < 2:6263639/150‑1 (MQ=255) tgGGAGCGGCCTTGCGTCGCTAaatgggggcggcgcgcccctccgtttgcagctttgccgcttaaattggtggggccgttttggggccctatcgcgacgcacggccgctcccacaggccgccccacaggcgcccaggccgctacattcca < 2:4749269‑M1/150‑129 (MQ=255) ggtcGCGGCCTGGCGTCGCTATCGGGCCGCAACGCGGCCCCACCAATTTCAGCGGCACCGCTGCAATCGTAGGGGCGCCCCGCACCCTTTCCGCGACCCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTg > 1:8324660‑M1/5‑150 (MQ=255) gggCGCGGCCTTGCGTCGCTAaatgggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctaccgcgaggcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccac < 2:8797806‑M1/150‑130 (MQ=255) gggAGCGGCCTTGCGTCGCGAaatgggggcgtagcgccccaacgattgcagcttggccgctgaatttgggggggccgctttgcggccctagcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccac < 2:5074453‑M1/150‑130 (MQ=255) aGCGGCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccga > 2:2334961‑M1/1‑18 (MQ=255) gCGGCCTTGCGTCGCTAaacgggggcggagcgcccctacttttgcaggtttgccgcttaatttgctggggccgctttggggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgat < 2:4462068‑M1/150‑134 (MQ=255) ggCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcg > 1:2909127‑M1/1‑15 (MQ=255) gCCTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcga > 2:418931‑M1/1‑14 (MQ=255) GCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGAAAAGCTGCAATCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGtt > 2:6636214‑M1/1‑150 (MQ=255) ccTTGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgac > 1:2740188‑M1/1‑13 (MQ=255) CTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTgg < 1:5484406‑M1/150‑1 (MQ=255) ttGCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacac > 1:2758054‑M1/1‑11 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAACGCTGCAATCGTAGGGGCGCTCCACACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTGGGCCCGTTGGc < 1:6115994‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:3865304‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:2063255‑M1/150‑1 (MQ=255) tGCGACGCGAaatgggtgcggagcgcccccacgatggcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacacc < 2:8213483‑M1/150‑141 (MQ=255) ggcgccGCCAaatgggtggggagcgcccctccgattccagctttgccgctcaatttgctggggccgcttggcggccctatcgcgacgcacggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacacc < 2:2274167‑M1/149‑141 (MQ=255) gCGTCGCGAaaagggtgcggagcgcccctacgattgcagctttgccgctgaaattgctggggccgctttgcggccctatcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacacca > 1:1828228‑M1/1‑9 (MQ=255) GCGTCGCGCTCGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTCGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:5223727‑M1/1‑150 (MQ=255) GTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGt < 2:3008690‑M1/150‑1 (MQ=255) | GCGATTGTGCACGGAAAGGTTGCACTTGCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTGCAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTT > NC_002947/4081249‑4081547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |