| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,081,425 | G→C | 7.4% | intergenic (‑263/+121) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,081,425 | 0 | G | C | 7.4% | 665.4 / 4.7 | 221 | intergenic (‑263/+121) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (113/86); new base C (16/5); total (129/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 224 total aligned reads displayed.
GCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGG > NC_002947/4081276‑4081574 | gCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAg < 1:3843613/150‑1 (MQ=255) aaGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGGGGCGCGGGTGGGGCGCCAAGCGGCCCCAGcca > 1:8080262/1‑148 (MQ=255) cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGCGGCGCGATGGGGGCGCAGAGCCGCGCCAGCAAATTcc > 1:2080596/1‑149 (MQ=255) cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 2:7478606/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGTCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 2:7276851/150‑1 (MQ=255) ttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCg < 1:4115643/150‑1 (MQ=255) gagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGc < 1:4759577/150‑1 (MQ=255) agCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCt < 2:2845928/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:3737752/150‑1 (MQ=255) cGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑c < 2:3226899/150‑1 (MQ=255) gTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑Caa > 1:8890343/1‑150 (MQ=255) gTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGCTGGGGCCGCAAAGCGGCCCCCGCACAGTCAGCGGCcaaccgggca > 1:630052/1‑143 (MQ=255) cACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCCCTAGGGCCGCCAAGCGGCCCCCGCAAATTCAGCGGCAAAGCGG‑CCATCgg > 2:5479634/1‑149 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTa < 2:7607988/150‑1 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTa < 2:4187216/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAg < 1:9105112/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCCCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCAG‑CAAACGTAg > 2:4370574/1‑150 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAgg < 1:450392/150‑1 (MQ=255) ttGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGCAAATTCAGCGGCAAAGCGG‑CAAAAGTAgg > 1:7594764/1‑150 (MQ=38) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTG‑CAAACGTAGGGgcgc > 2:8972103/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTTCGTCGCGATATGGCCGCAAAGCGGCCCCACCAAATTAAGCGGCAAAACTG‑CAATAGGATGGgcgc > 2:3320720/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGTTAGGGCCGCCAAGCCGCCCCCGCAAATTCACCGGCAAAGCTG‑CCAACCTAGGGgcgc > 2:4768256/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCCAATTCAGCCGCAAAGCAG‑CAAACGTATGGgggc > 2:1921183/1‑150 (MQ=38) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTc < 2:3639703/117‑1 (MQ=255) gCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCCGCGCGCTAGGGCCGCCAACCGGCCCCCCCCAATTAAGCGGCCAAGCTG‑CGCACGTAGGGGCGcgccgccc > 2:8479780/1‑148 (MQ=255) gttcagaagtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCAcc > 1:754485‑M1/62‑150 (MQ=255) ggAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCAccc < 1:3536783/150‑1 (MQ=255) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGGGATTGGGCCGCAAAGCGGCCCCCGCAATTACAGCCGCAAAGCTG‑CAATCGAAGGGGCGCTCCGCAcccg > 1:5285633/1‑149 (MQ=38) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGCTAGGGCCGCAAAGCGGCCCCAGCCAATTCAGCGGCAAAGCTG‑CAAACGTAGGGGCGCTCCGCccccg > 2:5888187/1‑149 (MQ=38) ggCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCAAGCGTCCCCATAATGCCCCAAAACGCCCCCAGCAAATTAAGCGGCAAAACAG‑AAAAAGTACGGGCGCACCCCCCCCattt > 2:1180419/1‑150 (MQ=255) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtc > 2:8890186‑M2/1‑148 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcg > 1:5842068‑M2/1‑147 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCCTCGCGAAAGGGCCGCAAAACGGCCCCAGCAATTTCAACCGCAAACCTT‑CAAACGTAGGGGCGCAACGCACCCATTtag < 2:5460508‑M2/150‑4 (MQ=255) tttgCTGTGGTCGATCGGTGGAATGTAGCGGCCGGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgc > 1:8145897‑M2/2‑146 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 1:4389114/107‑1 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgc > 1:724258‑M2/1‑146 (MQ=255) ttGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAgggg < 2:5754964/130‑1 (MQ=255) tGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcga > 2:2640339‑M2/1‑144 (MQ=255) gCTGGTGTCGATCGGTGGAATGTAGCGGCATGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCCGCCCCAGCAAATTCAGCCGCAAAGCTG‑CCAACGTAGGGGCGCGCCGCACCCAGTtcgcgcc < 2:611104‑M2/150‑8 (MQ=255) actcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc > 2:8378191‑M1/51‑150 (MQ=255) actcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc > 1:2706324‑M1/51‑150 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgc > 1:1828228‑M2/1‑141 (MQ=255) ggTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAAACCGGCCCCACCAATTTGAGCGGCAAAGCAG‑CAATCGGAGGGGCGCTCCGCACCCGTTtcgcgacgcc < 2:2274024‑M2/150‑11 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa > 1:2758054‑M2/1‑139 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa > 1:2883869‑M2/1‑139 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa > 1:3328000‑M2/1‑139 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 1:3607437‑M1/45‑150 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 2:3543658‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggc > 2:5336156‑M2/1‑136 (MQ=255) gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCGTTtcgcgacgcaaggccg < 2:8135124‑M2/150‑17 (MQ=255) aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtc > 2:2641899‑M2/1‑133 (MQ=255) aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCCCAAAGCGGCCCCAGCAAATTAAGCGGCAAACCTG‑CAAAAGTAGGGGCGCTCCGCCCCCGTTtagcgacgcaaggccgc < 2:4462068‑M2/150‑18 (MQ=255) tCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgct > 2:2334961‑M2/1‑132 (MQ=255) tCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgct > 1:6032526‑M2/1‑132 (MQ=255) cGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTTGGTCGCCATAAGGGCCCAAAACCGCCCCACCAAATTAAGCCGCAAAGCCGCCAACCGGA‑GGGCGCGCCCCACCCCGTTCGCGACCCAAcgccgcga > 2:77063/1‑148 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGGTAGGGCCGCAAAGCGGCCCCAGCAATTTAAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCATTtcgcgacgcaaggccgcgccc < 2:2186871‑M2/150‑22 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCCCAAATTCAGCGGCCAAGCTG‑CAATCGTTGGGGCGCTACGCCCCCATTtcgcgacgcaaggccgctccc < 2:5074453‑M2/150‑22 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCCTCGCGGTAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCATTtagcgacgcaaggccgcgccc < 2:8797806‑M2/150‑22 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATATGGCCGCAAAGCGGCCCCCGCAAATTCAGCCGCAAAGCGG‑CAAACGTAGGGGCGCTCCGCACCCAGTtcgccacgcaacgccgcgccc < 2:4740136‑M2/150‑22 (MQ=255) aTGTTGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:5323724/150‑1 (MQ=255) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:6809019/150‑1 (MQ=255) aGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTGGCGTCGCGCTAGGGGCGCAAAACGGCCCCCGCAAATTGCGCGGCCCAGCAG‑CCCACGTAGGGGCGCTCCGCCCCCATTTCGCGACGCACCGCCGCTCCCACCAACTcc > 2:5578458/1‑150 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGGCGCGATAGGGCCGCAAAGCGGCCCCCCCAAATTCAGCGGCAAAGCTG‑CAAACGTAGGGGCGCTCCGCACCCGTTTCGCGACGCACCGCCGCGCCCACAAACTCCa > 2:5821674/1‑150 (MQ=25) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCCCAGCGGCCCCAGCAATGTCAGCGGCCCAGCGG‑CCAAGGTTGGGGCGCGCCGCACCCGTTTGGCGCCGCCAGGCCGCGCCCCCCAAGTCCa > 2:7050613/1‑150 (MQ=21) cgcCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGATAGGGCCGCAAAGCCGCCCCAGCAAATTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACCAAGTCCAACCGcccccc > 2:6086633/1‑150 (MQ=37) ccTGGGGGGCGGCGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCAGAAATTACCGCGGAAACGCTG‑AAATGGTCGGGGCGCTCCGCACCCTTTTCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCcac < 2:1631713/150‑1 (MQ=25) gcggcCGGTGGGCGCGGCGTTGCGTCGCGATCGGGCCGCAACGCGGCCCCAGCAATGTCAGCGGCAACGCTG‑CAATCGTCGGGGCGCTCCGCACCCTTTGCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAgggg < 2:8669461/150‑1 (MQ=255) cggcCGGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTCCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGc < 2:6263639/150‑1 (MQ=255) TGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAACGCTG‑CAATCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGtt > 2:6466626‑M1/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgac < 1:88840‑M2/150‑69 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAACGCTG‑CAATCGTAGGGGCGCTCCACACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTGGGCCCGTTGGc < 1:6115994‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:8468469‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:3865523‑M1/150‑1 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagc < 2:8216180‑M2/150‑75 (MQ=255) CGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTa < 1:726023‑M1/150‑1 (MQ=255) CGATCGGGCCGCAACGCGCCCCCAGCAATTTCAGCGGCATAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt > 2:3049895‑M1/1‑150 (MQ=255) CGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt < 2:1362406‑M1/150‑1 (MQ=255) CGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt < 2:3924758‑M1/150‑1 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 2:4196263/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:4519941/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:2865698/3‑150 (MQ=255) tAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:6852379/1‑150 (MQ=255) tAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:2229280/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaatgccttc < 1:2999864‑M2/150‑84 (MQ=255) ggCCGCAACGCGGCCCCCGCAATTTCTGCGGAAACGCTG‑CATTGGTTGGGGCGCCCCGCCCCCTTTCCGCCCCGCACCCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa < 1:6110876/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 2:79549/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:7245093/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:6939979/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 1:5221672/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 1:5475789/1‑150 (MQ=255) cGCACAGCGGCCCCAGCAAGTACAGCGGCAAAGCGG‑CACTCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg < 2:7022247/150‑1 (MQ=255) cGCAACGCGGCCCCAGAAATTTCAGCGGAAACGCTG‑CAATCGTCGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg < 2:3428545/150‑1 (MQ=255) aacgCGGCCCCACCTATTTCCGCGGCATCGCTG‑CAATCGTCGGGGCGCTCCCCACCCCGGCCGCCACCCACGCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAg < 1:4367874/147‑1 (MQ=255) aaGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGc > 1:2004125/1‑150 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaatgccttccgcttgtaaagacaagt < 1:141260‑M2/150‑101 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg > 1:7139300/1‑99 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:7139300/99‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc < 1:79602/150‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGGTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc > 2:6538405/1‑150 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTCTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc < 2:7533173/150‑1 (MQ=255) | GCGAAGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGG > NC_002947/4081276‑4081574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |