| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,081,429 | T→A | 11.5% | intergenic (‑267/+117) | sdaC ← / ← amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,081,429 | 0 | T | A | 11.5% | 606.0 / 17.5 | 219 | intergenic (‑267/+117) | sdaC/amaC | serine:H+ symport permease/D‑lysine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (101/84); new base A (25/5); total (129/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.67e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
AGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAAC > NC_002947/4081280‑4081578 | cTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCa < 2:7478606/150‑1 (MQ=255) tttCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGTCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGc < 2:7276851/150‑1 (MQ=255) cGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCa > 1:4187216/1‑150 (MQ=255) gaggagCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCaa > 1:6981646/1‑150 (MQ=255) gcagCGGTTGCACTAGTCTTTACAAGAGCAAGGCATTGCGGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTATGGGGCGGCCTGTGGGAGCGGCCAATCGTCGCGAAAGGGCCCCAAAGCGGCCCCAGCAAATTCAGCGGCAAAg > 2:4406129/3‑150 (MQ=255) agCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCt < 2:2845928/150‑1 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg > 2:6301440/1‑150 (MQ=255) gCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTg < 1:3737752/150‑1 (MQ=255) cGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑c < 2:3226899/150‑1 (MQ=255) gTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑Caa > 1:8890186/1‑150 (MQ=255) gTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGCTGGGGCCGCAAAGCGGCCCCCGCACAGTCAGCGGCcaaccgggca > 1:630052/1‑143 (MQ=255) cACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCCCTAGGGCCGCCAAGCGGCCCCCGCAAATTCAGCGGCAAAGCGG‑CCATCgg > 2:5479634/1‑149 (MQ=255) aCTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTa < 2:7607988/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAg < 1:9105112/150‑1 (MQ=255) cTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCCCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCAG‑CAAACGTAg > 2:4370574/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAAATTCAGCGGCAAAGCTG‑CAAACGTAGGGgcgc > 2:8972103/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGTCGCGTTAGGGCCGCCAAGCCGCCCCCGCAAATTCACCGGCAAAGCTG‑CCAACCTAGGGgcgc > 2:4768256/1‑150 (MQ=255) tttACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGGTTGGGCCGCAAAGCGGCCCCCCCAAAATCACCGGCAAACCTG‑CAAACGTAGGGgggc > 2:3320540/1‑150 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTcc < 2:5555087/150‑1 (MQ=255) aCAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGGGGCGGGGTGGGGGCGCAAAGCGGCCCCCGCCAGTTAAGCGGCCAAGCTG‑CAAGACTGGGGGGGCTcc > 1:5223727/1‑150 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGGCGCAAAGCGGCCCCAGCACTTTCAGCGGCAAAGCTG‑CAAACGTAGGGGCGCTCCGc > 2:6221826/1‑150 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTc < 2:3639703/117‑1 (MQ=255) aaGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGGGGCGCGTTGGGGCCGCCAAGCGGCCCCAGCACTTTAAGCGGCCAAGCGG‑CCATACTGGGGGGGCACCGc > 1:4496799/1‑150 (MQ=255) gCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCCGCGCGCTAGGGCCGCCAACCGGCCCCCCCCAATTAAGCGGCCAAGCTG‑CGCACGTAGGGGCGcgccgccc > 2:8479780/1‑148 (MQ=255) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGGGGGGGGCGGGAGGGCCGCCAAGCGGCCCCCCCAAGTTAAGCGGCCAAGCAG‑GACAAGGGGGGGCGCACCGCAcccg > 1:5285840/1‑149 (MQ=255) gAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCGTCGCGCTAGGGCCGCAAAGCGGCCCCAGCCAATTCAGCGGCAAAGCTG‑CAAACGTAGGGGCGCTCCGCccccg > 2:5888187/1‑149 (MQ=38) aaGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCtt < 1:5982796/150‑1 (MQ=255) ggCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCAAGCCACGCGAGATGGCCGCAAAGCGGCCCCCCCCATTAAAGCCGCCAAGCAG‑CAAGAGTATGGGCGCAccccccccaatt > 2:1180318/1‑146 (MQ=255) gCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtc > 2:8890186‑M2/1‑148 (MQ=255) cATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCATGCCTCGCGAAAGGGCCGCAAAACGGCCCCAGCAATTTCAACCGCAAACCTT‑CAAACGTAGGGGCGCAACGCACCCATTtag < 2:5460508‑M2/150‑4 (MQ=255) tttgCTGTGGTCGATCGGTGGAATGTAGCGGCCGGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgc > 1:8145897‑M2/2‑146 (MQ=255) gtaactcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTcgc > 1:5027794‑M1/54‑150 (MQ=255) aTTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCTTGCGTGGCGATAGGGCCGCAAATCGGCCCCAGCAATTTAAGCGGCAAATCTG‑CAATAGTTGGGGGGCTCCGCACCCATTtagc < 2:3772292‑M2/150‑5 (MQ=255) ttGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAgggg > 1:5754964/1‑130 (MQ=255) ttGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAgggg < 2:5754964/130‑1 (MQ=255) tGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcga > 2:2640343‑M2/1‑144 (MQ=255) actcgccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGAc > 2:8378191‑M1/51‑150 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGGCGTGGGGGGCGGGAGGGCCGCAAACCGGGCCCCCCAAATTCACCGGCAAACCAG‑CAAAAGGATGGGCGCGCCGCCCCCGTTTCGcgccgc > 1:2883303/1‑150 (MQ=255) tGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgc > 1:1828228‑M2/1‑141 (MQ=255) ggTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCAAACCGGCCCCACCAATTTGAGCGGCAAAGCAG‑CAATCGGAGGGGCGCTCCGCACCCGTTtcgcgacgcc < 2:2274024‑M2/150‑11 (MQ=255) gtgtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaa > 1:3394206‑M2/1‑139 (MQ=255) ccaacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAg > 1:469682‑M1/46‑150 (MQ=255) gtCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaagg > 1:2740188‑M2/1‑137 (MQ=255) caacgggccaactgcggcccctcctgtggggcgcggttggacttTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAgg > 2:3543658‑M1/45‑150 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggc > 2:418931‑M2/1‑136 (MQ=255) tCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggc > 2:5336156‑M2/1‑136 (MQ=255) gATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCGTTtcgcgacgcaaggccg < 2:8135124‑M2/150‑17 (MQ=255) aTCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtc < 1:2641899‑M2/135‑3 (MQ=255) tCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgct > 2:2334961‑M2/1‑132 (MQ=255) cGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTTGGTCGCCATAAGGGCCCAAAACCGCCCCACCAAATTAAGCCGCAAAGCCGCCAACCGGA‑GGGCGCGCCCCACCCCGTTCGCGACCCAAcgccgcga > 2:77063/1‑148 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCCCAAATTCAGCGGCCAAGCTG‑CAATCGTTGGGGCGCTACGCCCCCATTtcgcgacgcaaggccgctccc < 2:5074453‑M2/150‑22 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCCTCGCGGTAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCATTtagcgacgcaaggccgcgccc < 2:8797806‑M2/150‑22 (MQ=255) gTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCGGCGCGATATGGCCGCAAAGCGGCCCCCGCAAATTCAGCCGCAAAGCGG‑CAAACGTAGGGGCGCTCCGCACCCAGTtcgccacgcaacgccgcgccc < 2:4740136‑M2/150‑22 (MQ=255) aTGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACaaa < 2:6809019/150‑1 (MQ=255) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTTCGGCGCGATAGGGCCGCAAAGCGGCCCCCCCAAATTCAGCGGCAAAGCTG‑CAAACGTAGGGGCGCTCCGCACCCGTTTCGCGACGCACCGCCGCGCCCACAAACTCCa > 2:5821674/1‑150 (MQ=25) gCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCCCAGCGGCCCCAGCAATGTCAGCGGCCCAGCGG‑CCAAGGTTGGGGCGCGCCGCACCCGTTTGGCGCCGCCAGGCCGCGCCCCCCAAGTCCa > 2:7050613/1‑150 (MQ=21) tGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCGTGCCGCGCCCTAGGGCCCCAAACCGGCCCCAGCCAATTAAGCCGCCAAACGG‑CAATCGGAGGGGCGCGCCGCCCCCGTTTAGCGACCCAAGGCCGCTCCCACAAACTACAAccccc > 2:1938835/1‑147 (MQ=255) ccTGGGGGGCGGCGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCAGAAATTACCGCGGAAACGCTG‑AAATGGTCGGGGCGCTCCGCACCCTTTTCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCcac < 2:1631713/150‑1 (MQ=25) gggCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCATGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:4015743/150‑1 (MQ=255) gcggcCGGTGGGCGCGGCGTTGCGTCGCGATCGGGCCGCAACGCGGCCCCAGCAATGTCAGCGGCAACGCTG‑CAATCGTCGGGGCGCTCCGCACCCTTTGCGCGACGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAgggg < 2:8669461/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:3865304‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:8468469‑M1/150‑1 (MQ=255) TTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGc < 1:2063255‑M1/150‑1 (MQ=255) GCGTCGCGCTCGGGCCGCAACGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTCGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGa > 2:5223727‑M1/1‑150 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagc < 2:8216180‑M2/150‑75 (MQ=255) CGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTa < 1:726023‑M1/150‑1 (MQ=255) gcgATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaat < 2:6082919‑M2/150‑78 (MQ=255) CGATCGGGCCGCAACGCGCCCCCAGCAATTTCAGCGGCATAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt > 2:3049895‑M1/1‑150 (MQ=255) CGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACt < 2:1362406‑M1/150‑1 (MQ=255) ttcggcccGCCACGCGGCCCCATCATTTACCGCGGCAAAGCTG‑CAATCGTCGGGGCGCCCCCCACCCTTTGCGCGCCGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTc < 1:2089752/144‑1 (MQ=255) attgggCCGCAACGCGGCCCCAGCATTTTCAGCGGCAAAGCTG‑CACTCGTAGGGGCGCGCCGCACCCTTTTCGCCACGAAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTc < 2:1864625/147‑1 (MQ=255) ATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTc < 1:298640‑M1/150‑1 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:4517664/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:7170527/3‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCt > 1:2864493/3‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 1:603266/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGaa > 2:79549/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAAc > 1:3606887/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:6939979/1‑150 (MQ=255) ccGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACg > 2:7245093/1‑150 (MQ=255) cGCACAGCGGCCCCAGCAAGTACAGCGGCAAAGCGG‑CACTCGTTGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg < 2:7022247/150‑1 (MQ=255) cGCAACGCGGCCCCAGAAATTTCAGCGGAAACGCTG‑CAATCGTCGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACgg < 2:3428545/150‑1 (MQ=255) gCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGc > 2:2630119/1‑150 (MQ=255) gCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGc > 1:8900128/1‑150 (MQ=255) gCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGc > 1:8089139/1‑150 (MQ=255) aacgcgcCCCCCGCACTTTCCGCGGCACAGCTG‑CCCGCGGGGGGGCGCCCCGCCCCCTGTCCCCGCCCCACGCCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAg < 1:611104/147‑1 (MQ=255) gCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACg > 1:4002687/1‑150 (MQ=255) cccAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCt > 1:3179927/1‑150 (MQ=255) cccAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCt > 1:7551472/1‑150 (MQ=255) ccgCAATTACCGCCGCCACGCTG‑CAATCGTCGGGCCGCCCCGCCCCCTTCTCGCCCCGCACGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc < 1:4370574/148‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTtcgcgacgcaaggccgctcccacaggccgccccacaggcgcccaggccgctacattccaccgatcgacaccagcaatgccttccgcttgtaaagacaagt < 1:141260‑M2/150‑101 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACaggagg < 2:7139300/99‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc < 1:79549/150‑1 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGGTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc > 2:6538405/1‑150 (MQ=255) cAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTCTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTc < 2:7533173/150‑1 (MQ=255) aGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCg > 1:6803726/1‑150 (MQ=255) gCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCgg > 1:7267327/1‑150 (MQ=255) cAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGc > 1:3692325/1‑150 (MQ=255) tttCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCATCCGCGCCCCACTGGAGGGGCCGCAGTTGGGCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAAc > 2:6472587/1‑150 (MQ=255) tttCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAAc > 1:8265507/1‑150 (MQ=255) | AGCCCTTTTCCGAGGAGCGGTTGCACTTGTCTTTACAAGCGGAAGGCATTGCTGGTGTCGATCGGTGGAATGTAGCGGCCTGGGCGCCTGTGGGGCGGCCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCAGCAATTTCAGCGGCAAAGCTG‑CAATCGTAGGGGCGCTCCGCACCCTTTTCGCGACGCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAAC > NC_002947/4081280‑4081578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |