BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,391,474	T→A	5.2%	T411T (ACA→ACT)	PP_3865 ←	tail protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,391,474	0	T	A	5.2%	864.1 / 9.8	298	T411T (ACA→ACT)	PP_3865	tail protein
Reads supporting (aligned to +/- strand): ref base T (111/151); new base A (17/3); total (142/156)
Fisher's exact test for biased strand distribution p-value = 2.60e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 308 total aligned reads displayed.

TAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGGCAG  >  NC_002947/4391325‑4391623

  ggCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACtgt                                                                                                                                                     <  1:373123/150‑1 (MQ=255)

     cTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCGGGCGCCGAACCCC‑CCGCGGTAACGCCAAAAGGCGTGGCCGCGAAGGCCACACCCACCCCCCCCGGGGCCCCAGTGGc                                                                                                                                                  >  1:30553/1‑150 (MQ=255)

     cTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCT‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCGGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTgga                                                                                                                                                  <  2:9078191/150‑2 (MQ=255)

     cTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CCATCCCCCCCGCGAGCCGGCCAAAACGCGGGGCCCCGAAGGCCCCACCCAGCACCCCCCTGGCCACAGAGGc                                                                                                                                                  >  1:5195820/1‑150 (MQ=255)

      ttGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGTTCCCCGCGGCGATCAGGCCCATCGGCGGGGCCGCGCAGGCCCCCCCGGGCCCCCGCGGGGCCCCGGTgggg                                                                                                                                                 >  1:7269471/1‑148 (MQ=255)

      ttGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCCGCGATCAGGCCAAACGGCGTGGCCGCGCAGGCCACCCCGAGCACCCGCGGGGCCACTGTGGcc                                                                                                                                                 >  1:5160053/1‑150 (MQ=255)

        gATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCCATCGGCGGGGCCGCGAAGGCCACACCGCGCACCCGCGTGGCCACGGTGGCcgc                                                                                                                                               >  2:4235188/1‑150 (MQ=255)

        gATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCcgc                                                                                                                                               <  1:4517219/150‑1 (MQ=255)

          tCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATAAGGCCAATAGGCGTGGCCGCGAAGGCCACACCGAGCACCCCCCTGGCCACTGTTGCcgcgc                                                                                                                                             >  1:8240709/1‑149 (MQ=255)

           cAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGaa                                                                                                                                            <  2:8728151/150‑1 (MQ=255)

             gCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGGTCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAaca                                                                                                                                          >  2:8398687/1‑150 (MQ=255)

              cTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAacac                                                                                                                                         <  2:1502012/150‑1 (MQ=255)

                  cacaGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCCATCGGCGTGGCCGCGCAGGCCACACCGAGCACCCGCGTGGCCACGGTGGCCGCGAACAccgcc                                                                                                                                     >  2:8685913/1‑150 (MQ=255)

                     aGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCCCTGTGGCCGCGCACACCGCcgca                                                                                                                                  >  2:8907859/1‑150 (MQ=255)

                         cgcTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCcgcacgca                                                                                                                              <  1:2796183/150‑1 (MQ=255)

                            tGAAGTACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCGGCCG‑CGTTACCCGCGGCGGTCAGGGGAATATGGGTGGGCGCGTAGGCCACACCGAGCACCCGCGTTGGCACTGTGGGCGCGAACAACGCCGCGCGCAgcg                                                                                                                           >  2:3795484/1‑150 (MQ=255)

                            tGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGTTCCCCCCGGCGCGCAGGCCAATCCGCGTGGCCGCCAAGGCCCCACCCCGCAACCCCGTGGCCACTGTGGCCGCGAACACCGCCCCACGCAgcg                                                                                                                           >  2:8877777/1‑150 (MQ=255)

                              aagaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGCTCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCCAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGcgcg                                                                                                                         >  2:7848080/1‑150 (MQ=255)

                              aagaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGcgcg                                                                                                                         <  1:4002296/150‑1 (MQ=255)

                              aagaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCCCGGCGATCAGGCCAAAAGGCGTGGCCGCGAAGGCCACACCCAGCACCCGCGTGGCCCCTGTGGCCGCGAACACCGCCGCACGCAGcgcg                                                                                                                         >  2:5616437/1‑150 (MQ=255)

                                gaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGCTCAGGCCCATAGGCGTGGCCGCGAAGGCCACACCGAGCACCCCCGTGGCCACGGTGGCCGCGTACACCGCCGCACGCAGCGCGGt                                                                                                                       >  2:3105950/1‑150 (MQ=255)

                                gaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGt                                                                                                                       <  1:1138579/150‑1 (MQ=255)

                                gaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCCCGGCGCTCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCCAGCACCCCCGTGGCCACAGTGGCCGCGAACACCCCCGCACGCAGCGCggg                                                                                                                       >  2:6374506/1‑149 (MQ=255)

                                  aCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGa                                                                                                                     >  2:2232051/1‑150 (MQ=255)

                                          aCCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGgccgcc                                                                                                             <  1:4235188/150‑1 (MQ=255)

                                              tctcCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCgg                                                                                                         <  1:6736718/150‑1 (MQ=255)

                                                tcCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCCCGGCGATCAGGCCAAACGGCGTGGCCGCGAAGGCCACACCCAGCACCCGCGTGGCCACGGTGGCCGCGCACACCGCCGCACCCAGCGCGGTGAAGGCCGCCCCCGCa                                                                                                       >  2:258772/1‑150 (MQ=255)

                                                 cccAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCaa                                                                                                      <  1:5593276/150‑1 (MQ=255)

                                                 cccAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCaa                                                                                                      <  2:1776120/150‑1 (MQ=255)

                                                  ccAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAAACGGCGTGGCCGCGAAGGCCACACCCAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCCAt                                                                                                     >  2:7038109/1‑150 (MQ=255)

                                                  ccAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAAACGGCGTGGCCGCGAAGGCCACACCCAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAAt                                                                                                     >  2:5104335/1‑150 (MQ=255)

                                                    aGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGa                                                                                                   <  1:1793/150‑1 (MQ=255)

                                                    aGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGa                                                                                                   <  1:4722174/150‑1 (MQ=255)

                                                     gTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGAc                                                                                                  <  2:1917394/150‑1 (MQ=255)

                                                       tGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCCCCGCCATCACGCCAAACCGCGTGGCCGCGAACGCCACACCCCGCACCCCCGGGGCCACGGTGGCCCCCAACACCCCCCCACCCCCCGCGGGGAACGCCGCCCCCGCCAAGACgc                                                                                                >  2:8032184/1‑149 (MQ=255)

                                                        ggCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGAt                                                                                               <  2:2580562/150‑1 (MQ=255)

                                                              gaTCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCcgcg                                                                                         >  2:8325876/1‑150 (MQ=255)

                                                                    aCCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCaa                                                                                   <  1:7802398/150‑1 (MQ=255)

                                                                        gccgccgccG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGc                                                                               <  2:1790358/150‑1 (MQ=255)

                                                                         ccgccgccg‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCg                                                                              <  2:7729915/150‑1 (MQ=255)

                                                                          cgccgccg‑cGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCgg                                                                             <  1:8298788/150‑1 (MQ=255)

                                                                           gccgccg‑cGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCggg                                                                            <  1:9018693/150‑1 (MQ=255)

                                                                             cgccg‑cGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGtt                                                                          >  1:8627592/1‑150 (MQ=255)

                                                                             cgccg‑cGATCCCCGCGGCAATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGtt                                                                          <  1:7580120/150‑1 (MQ=255)

                                                                              gccg‑cGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTg                                                                         >  1:1716598/1‑150 (MQ=255)

                                                                                cg‑cgATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTc                                                                       <  1:6966474/150‑1 (MQ=255)

                                                                                  ctgATCGCCGCGGGGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCg                                                                      >  1:7330853/3‑150 (MQ=255)

                                                                                    gATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCt                                                                    <  1:4937302/150‑1 (MQ=255)

                                                                                         ccGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGatca                                                               >  1:3525044/1‑150 (MQ=255)

                                                                                            cggcgATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCt                                                            <  2:5744758/150‑1 (MQ=255)

                                                                                              gcgATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTgc                                                          <  1:7969093/150‑1 (MQ=255)

                                                                                                gATCAGGCCAATCGTCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTgcgc                                                        >  2:8772035/1‑150 (MQ=255)

                                                                                                gATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTgcgc                                                        <  2:3277589/150‑1 (MQ=255)

                                                                                                     ggCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCatat                                                   >  2:4496832/1‑150 (MQ=255)

                                                                                                      gCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCTATATg                                                  >  2:1162605/1‑150 (MQ=255)

                                                                                                      gCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATg                                                  >  1:1995997/1‑150 (MQ=255)

                                                                                                       ccAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATgg                                                 <  2:6713120/150‑1 (MQ=255)

                                                                                                       ccAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATgg                                                 <  2:8240709/150‑1 (MQ=255)

                                                                                                        cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                <  1:2565079/150‑1 (MQ=255)

                                                                                                        cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                <  2:4696775/150‑1 (MQ=255)

                                                                                                        cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                >  1:3273225/1‑150 (MQ=255)

                                                                                                         aaTCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCaa                                                                                                      >  1:4326152/1‑95 (MQ=255)

                                                                                                              gCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATcc                                          >  1:1906880/1‑150 (MQ=255)

                                                                                                                gTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCAc                                        <  1:6207243/150‑1 (MQ=255)

                                                                                                                  ggCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACgg                                      <  1:6099733/150‑1 (MQ=255)

                                                                                                                  ggCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACgg                                      <  1:3198446/150‑1 (MQ=255)

                                                                                                                    ccGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGcc                                    >  2:6025321/1‑150 (MQ=255)

                                                                                                                    ccGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGcc                                    <  2:5848260/150‑1 (MQ=255)

                                                                                                                        gAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAg                                >  2:534361/1‑150 (MQ=255)

                                                                                                                            gCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGc                            >  1:7238006/1‑150 (MQ=255)

                                                                                                                             ccACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGTTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCt                           >  2:4144352/1‑150 (MQ=255)

                                                                                                                             ccACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCt                           <  2:7305466/150‑1 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGGCGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          >  2:4412554/1‑150 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          >  2:6631516/1‑150 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          <  1:8113397/150‑1 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          <  2:654362/150‑1 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          >  1:6637125/1‑150 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGGTGCTc                          <  2:5518746/150‑1 (MQ=255)

                                                                                                                              cacaCCGAGCACCCGCGTGGCCACGGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          <  2:1964249/150‑1 (MQ=255)

                                                                                                                               acacCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCg                         <  1:5513759/150‑1 (MQ=255)

                                                                                                                                cacCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGa                        >  1:7410691/1‑150 (MQ=255)

                                                                                                                                      gCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCg                  >  1:5066252/1‑150 (MQ=255)

                                                                                                                                        aCCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCa                >  1:7076532/1‑150 (MQ=255)

                                                                                                                                        aCCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCa                >  2:4960752/1‑150 (MQ=255)

                                                                                                                                         cccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAt               <  1:974853/150‑1 (MQ=255)

                                                                                                                                          ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              <  2:4642610/150‑1 (MQ=255)

                                                                                                                                          ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              <  2:8602291/150‑1 (MQ=255)

                                                                                                                                          ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:7397910/1‑150 (MQ=255)

                                                                                                                                          ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:1136247/1‑150 (MQ=255)

                                                                                                                                          ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:7985759/1‑150 (MQ=255)

                                                                                                                                              gTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATg          >  1:2417563/1‑150 (MQ=255)

                                                                                                                                                ggCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGcc        >  1:5848712/1‑150 (MQ=255)

                                                                                                                                                  ccACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCgg      >  1:1309494/1‑150 (MQ=255)

                                                                                                                                                  ccACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCgg      >  1:7884753/1‑150 (MQ=255)

                                                                                                                                                   cACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCggg     >  2:2317741/1‑150 (MQ=255)

                                                                                                                                                     cTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgca   <  2:6811875/150‑1 (MQ=255)

                                                                                                                                                     cTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgca   <  2:3944731/150‑1 (MQ=255)

                                                                                                                                                     cTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgca   <  2:3482848/150‑1 (MQ=255)

                                                                                                                                                     cTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgca   <  2:1247997/150‑1 (MQ=255)

                                                                                                                                                     cTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgca   <  1:6712521/150‑1 (MQ=255)

TAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCG‑CGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGGCAG  >  NC_002947/4391325‑4391623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`