| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,503,263 | A→T | 5.4% | intergenic (‑236/+19) | PP_3989 ← / ← PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,503,263 | 0 | A | T | 5.4% | 1057.0 / 31.7 | 310 | intergenic (‑236/+19) | PP_3989/PP_t60 | DNA‑cytosine methyltransferase/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (153/138); new base T (7/10); total (162/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 320 total aligned reads displayed.
AGGAAAAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCT > NC_002947/4503114‑4503411 | aGGAAAAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaa > 1:359245/1‑150 (MQ=255) ggAAAAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaat < 2:7618515/150‑1 (MQ=255) gAAAAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGaata > 1:8563305/1‑150 (MQ=255) aGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGTAAACGATCAGATAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCa < 1:5157527/150‑1 (MQ=255) gCTCTAGGGGAAGCGCGTCACGCCTAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAg < 2:6291452/150‑1 (MQ=255) gCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAg < 1:3408957/150‑1 (MQ=255) ctctAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAgg < 1:1929625/150‑1 (MQ=255) tctAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAggg > 2:4751613/1‑150 (MQ=255) tctAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAggg > 2:5862479/1‑150 (MQ=255) tctAGGGGAAGAGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGAAGCGGAAACGATCAGAGAATTGCGGAAACGACCCTGATGACAGAAGGGAAAAAACTAGATCCTCAGAAACGCAAAAAGCCCTGAATAATCAggg > 2:1506481/1‑150 (MQ=255) aGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCtt < 1:4536176/150‑1 (MQ=255) ggggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGATTTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCttt < 1:2708086/150‑1 (MQ=255) ggggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCttt < 2:5578392/150‑1 (MQ=255) gggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTg > 1:8746014/1‑150 (MQ=255) gggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTg > 1:6661816/1‑150 (MQ=255) gggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTg > 1:219740/1‑150 (MQ=255) ggAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACTATCAGAGAATTGCTTAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGa < 1:3149334/150‑1 (MQ=255) gcgcGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAatat > 1:3308188/1‑150 (MQ=255) gcgcGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCGTTGAatat > 2:1692218/1‑150 (MQ=255) tCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCgg > 1:491203/1‑150 (MQ=255) gCCAAGCTTAAGCAGCTCGCACACAGAATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGc < 2:7823029/150‑1 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAATATGCCCTGAATAATCTGGGGTTTGTATATGGCGGAAGc > 2:8800530/1‑150 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGACGc > 1:5792695/1‑150 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGc > 1:1043076/1‑150 (MQ=255) gCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGc > 1:432398/1‑150 (MQ=255) aaGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTa < 2:4820655/150‑1 (MQ=255) gCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTaga < 1:345405/150‑1 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt < 1:5089742/150‑1 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt > 1:3899436/1‑150 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt < 2:5046414/150‑1 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt > 1:4994367/1‑150 (MQ=255) gAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAt > 2:6948473/1‑150 (MQ=255) aaGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGAtt > 2:8978840/1‑150 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 2:524586/150‑1 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 2:6916631/150‑1 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 1:1335749/150‑1 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 2:4534617/150‑1 (MQ=255) agcagcTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTc < 2:3393364/150‑1 (MQ=255) cTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAAct > 2:2969426/1‑150 (MQ=255) tCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGACACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAActc > 1:6465877/1‑150 (MQ=255) tCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGATTATTCAGGGCt < 2:6838513/117‑1 (MQ=255) tCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAActc > 1:959665/1‑150 (MQ=255) cacacaGCATGTGTCGGATGCTGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAg < 2:329421/150‑1 (MQ=255) cacacaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAg < 1:6778567/150‑1 (MQ=255) acacaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAgg > 1:7909157/1‑150 (MQ=255) acacaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAgg > 1:2038582/1‑150 (MQ=255) acaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGAt > 2:2007698/1‑150 (MQ=255) acaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGAt > 1:1141418/1‑150 (MQ=255) acaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGAt > 1:7734979/1‑150 (MQ=255) acaGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTAGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGAt > 2:640260/1‑150 (MQ=255) caGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATa < 2:3956559/150‑1 (MQ=255) caGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATa < 2:1878220/150‑1 (MQ=255) tgtCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGACTAATCAGGGCGTTGACTATGGCGGACGCGTAGAGATTCGAACTCTAGGATAGTTGccc > 2:8022444/1‑150 (MQ=255) aTGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGAc < 2:2299379/150‑1 (MQ=255) gAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGttt > 1:2422216/1‑150 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCaa < 1:251689/150‑1 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCaa < 2:2617929/150‑1 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCaa < 1:1801852/150‑1 (MQ=255) cGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCaa < 1:1414545/150‑1 (MQ=255) gATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAg > 1:7858554/1‑150 (MQ=255) aaTTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAATACCGTTGc > 2:7426755/1‑150 (MQ=255) tGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCtt > 2:2695495/1‑150 (MQ=255) gtaaaCGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTaaa < 2:419017/148‑1 (MQ=255) aCGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCAc < 1:9064466/150‑1 (MQ=255) gACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTc > 1:7415570/1‑150 (MQ=255) gACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTc > 2:500079/1‑150 (MQ=255) gACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTc > 1:8960601/1‑150 (MQ=255) ccGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGc > 1:4121548/1‑150 (MQ=255) ccGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCCGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGc > 2:3123012/1‑150 (MQ=255) ccGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGAAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGc < 2:3614282/150‑1 (MQ=255) acGGATGACAGAAGTGAAAAAACAAGAGCCTCAGAAACGCAAAAAGCCCTGAAAAATCAGGGATTTGAATATGGCGTAAGCGAAGAGATTCGAACACTAGGATAGTAGCCCATCGAAGGTTTTCAAGACCCTTGACATAAACCACTCGGc > 2:3857037/2‑150 (MQ=255) ggATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCa < 1:8100254/150‑1 (MQ=255) gATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCAc > 1:7457617/1‑150 (MQ=255) aCAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAATGCCCTGAATAATGTGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCTTCGACGGTTTTCTAGTCGGTTGCGTTAATCCTCTCGGCCACGCtt > 2:8029330/1‑150 (MQ=25) aGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAATAGCGTTGCCTTAATCAACTCGGCCACGCttgg > 2:401702/1‑148 (MQ=255) aGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTcc > 1:1275380/1‑150 (MQ=255) aGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTcc > 2:1041032/1‑150 (MQ=255) ggAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTc > 1:4776667/1‑150 (MQ=255) gAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCg > 2:6532686/1‑150 (MQ=255) aaaaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGt > 1:536235/1‑150 (MQ=255) aaaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCTGGGCTTTGAATATGGCTGAAGCGTAGAGATTCGAACTCTAGGATATTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGttt < 1:4386279/150‑1 (MQ=255) aaaCTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGtttt < 1:8053602/150‑1 (MQ=255) tAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCgg < 1:8471622/150‑1 (MQ=255) agagCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGgc < 2:6636335/150‑1 (MQ=255) agCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGgccg < 2:1106042/150‑1 (MQ=255) cAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCcta > 2:8364229/1‑150 (MQ=255) cAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCata > 1:6259687/1‑150 (MQ=255) aGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCataa < 2:5996918/150‑1 (MQ=255) aGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCataa < 1:8181470/150‑1 (MQ=255) aGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCataa > 2:3242706/1‑150 (MQ=255) aaaCGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCataata < 2:2513375/150‑1 (MQ=255) aCGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATAcc > 2:8155110/1‑150 (MQ=255) gCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCtt > 1:5901549/1‑150 (MQ=255) gCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCtt > 1:7127300/1‑150 (MQ=255) aaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATTGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAAt < 1:6948473/150‑1 (MQ=255) aaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAAt > 2:1419158/1‑150 (MQ=255) aaaaGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAAt < 1:390778/150‑1 (MQ=255) aaaaGCCATGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCCGATCGGTTTGCGGCCGCCATAATACCTTAAt > 2:8588078/1‑150 (MQ=255) aaaGCCCTGATTATTCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATg > 1:3063372/1‑150 (MQ=255) gCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGaaa < 2:359245/150‑1 (MQ=255) | AGGAAAAGCTCTAGGGGAAGCGCGTCACGCCAAGCTGAAGCAGCTCGCACACAGCATGTGTCGGATGCGGAAACGATCAGAGAATTGCGGAAACGACCCGGATGACAGAAGGGAAAAAACTAGAGCCTCAGAAACGCAAAAAGCCCTGAATAATCAGGGCTTTGAATATGGCGGAAGCGTAGAGATTCGAACTCTAGGATAGTTGCCCATCGACGGTTTTCAAGACCGTTGCCTTAAACCACTCGGCCACGCTTCCAGCTCGTTTTGCGGCCGCCATAATACCTTAATGAAACACGCT > NC_002947/4503114‑4503411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |