| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,707,294 | A→C | 10.2% | intergenic (‑64/+113) | kdpF ← / ← PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,707,294 | 0 | A | C | 10.2% | 706.7 / 2.8 | 270 | intergenic (‑64/+113) | kdpF/PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (134/89); new base C (2/35); total (136/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.81e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
TGCGATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTC > NC_002947/4707146‑4707443 | gCGATCGGCGCGCAGCAGCGCCACCAGCCGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTGTGGGGAACTTGTCCGAGGGAGAGGCGTAAAg > 1:9094695/1‑150 (MQ=255) gCGATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAg > 1:8020834/1‑150 (MQ=255) gCGATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAg < 1:772989/150‑1 (MQ=255) gCGATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAg > 1:3406466/1‑150 (MQ=255) gATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAggg < 2:5993503/150‑1 (MQ=255) gATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAggg < 1:361699/150‑1 (MQ=255) aTCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAgggg < 1:6754571/150‑1 (MQ=255) aTCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAgggg < 2:5504368/150‑1 (MQ=255) tCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGc < 1:7685/150‑1 (MQ=255) tCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGc < 2:2146730/150‑1 (MQ=255) tCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGc < 1:4407919/150‑1 (MQ=255) ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 2:3521834/150‑1 (MQ=255) ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 1:7600324/150‑1 (MQ=255) ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga > 2:2779832/1‑150 (MQ=255) ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 2:4255575/150‑1 (MQ=255) ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCGTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga > 2:7398085/1‑150 (MQ=255) gcgcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAACGTGTCCGAGGGAGAGGCGGACAGGGGCgag > 2:150355/1‑150 (MQ=255) gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:8279917/1‑150 (MQ=255) gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAt > 2:8344200/1‑150 (MQ=255) gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGATTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:2380165/1‑150 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 1:593968/150‑1 (MQ=255) cgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtg < 1:6949472/150‑1 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgggg < 2:5750856/150‑1 (MQ=255) ccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgggggt < 1:6366267/150‑1 (MQ=255) cagcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGggggtgggggtg < 1:1629177/150‑1 (MQ=255) atcataTAAAACGCCAATGCCACTGCAAGCAGCAGTGACAGCCCGTCGAGCATGTTAATGTGTGTATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGTAAATTGTCCGAGGTAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg < 2:1913870/145‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg < 2:2243468/150‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg < 2:4528211/150‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCGCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGTGGGAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg < 1:6209062/150‑1 (MQ=255) agaataTAAAACGCCAATGCCACTGCCAGCAGAAGTGACAGCCCGTCGAGAATGTTAATGTGTGTATCTCCCCGTGTTACGGATTGGGCCGCTTTGGGGAAATTTTCCGAGGTAGAGGCTTAAAGGGGCTATATCGGGgggtggggttgg < 2:3056678/145‑1 (MQ=255) gcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGggtggggggggg > 2:1536752/1‑150 (MQ=255) taacccGCCAAGGCCACTGCCCGCCGCAGTGACCGCCCGTCGCGCCTGTTCTTGTGTGGAGCTCCCCGTGTTCGGGCGTGGGCCGCTTTGGGGAAATTGTCCGCGGGAGCGGCGTACCGGGGCGCGATCGGGGGGTGGGGGTGGGTATaa < 2:320567/145‑1 (MQ=255) aaaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAg > 1:4560865/1‑150 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGa > 2:5392496/1‑150 (MQ=255) actccAATGCCACTGCCCGCAGCTGTGACTGCCCGTCTTTCTTTTTAATTTGTGTATCTGCCCGTGTTACGGCTTGGGCCGCTTTGTGTAAATTGTCCGTGTTTTTGGCGTATTGGGGCGTGATGGGGGGGTGGGGGTTGGTATAAAGaa < 2:7737176/147‑1 (MQ=255) aCGCCAATGCCACTGCCAGCTGCTGTGACCGCCCGTCGTGCTGTTTCTGGTGTGGATCTCCGCGTGTTCGGGGTTGGGCCGCTTGGGGGAATTTGTCCGAGGGAGTGGCGTATCGGGGCGAGTTGGGGGGGTGGGGGTGGGTATAAAGaa < 2:5468974/150‑1 (MQ=255) cGCCACTGCCTCTGCCAGCAGCAGTGACTGCCCGTCGAGCTTGTTCTTGTGTGGATCTCCCGGTTTTAGGGCTGGGGCCGCTTTGGGTATTTTGTCCGCGGGTGCGGGGTACTGGGGCGTGATCGGGGGGTGGGGGTGGGTATAAAGAAt < 2:8613288/150‑1 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATg > 2:6977934/1‑150 (MQ=255) ccAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGGGGGGGGGGGTATAAAGGATGc > 2:3810030/1‑150 (MQ=255) aCTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAAt > 2:1630291/1‑150 (MQ=255) aCTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAAt > 1:1367757/1‑150 (MQ=255) tGCCAGCCGCAGTGACCGCCCGTCGCGCTTGTTCTTGTGTGGTTCTCCCGGTGTTTGGGCTTGGGCCGCTGTGGGGAAAGTGTCGGTGGGAGAGGGTTAATGGGGGGTGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCa < 2:840992/150‑1 (MQ=255) tGCCAGCAGCATTGACAGCCGGGCGAGCTTGTTCTTGTGTGGATCTCCCCGTGTTTCGGCTTGGGCCGCTTTGGGTAAATTGTCCGCGGGAGTGGCTTAAAGGGGGGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCa < 2:3320282/150‑1 (MQ=255) agcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGt > 1:507477/1‑150 (MQ=255) aggtgTGACAGGCCGTCGTGGATGTTCTTGTGTGGTTCTCGGCGTGTTAGGGCTTGGGCGGGTTTGGGGAATTTGTCGGAGGGAGAGGGGTAAAGGGGGGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgt < 2:7456107/146‑1 (MQ=255) gttgTGACTGCCGGTGGCGCCTGTTTTTGTGTGTTTCGCCCTTTGTTTGGGGTTGGGGGGGTTTGGGTACATTGTCGGTGGTTGTGGCTTACCGGGGCGCGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:4091/147‑1 (MQ=255) gctgTGACCGCCCGTCGAGCTTGTTCTTGTGTGGTTCTCCCGGTGTTACGTCTTGGGCCGTTTTGGGGATATTGTCCGTGGGAGAGGCGTAACGGGGCGCGCTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:1351513/147‑1 (MQ=255) gccgTGACTGCCCGTCGAGCTTGTTCTTGTGTGGATCTCCCCGTGTTACGGCTTGGGCGGCTTTGGGGAAATTGTCCGTGGGTGAGGCGTAACGGGGCGCGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:6732981/147‑1 (MQ=255) agTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGt > 1:5472708/1‑150 (MQ=255) cgCCCGTCGTGCTTTTTCATGTGTGTATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGTATATTGTCCGAGGGAGAGGCGTATCGGGGCGAGATCGGGGGGTGGGGGTGGGCATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCt < 2:3670031/149‑1 (MQ=255) aGCCCGTCGTGGTTGTTCATGTGTGGATCTCCCCGTTTTAGGGCTTGGGCCGCTTTGGGTAACTTGTCCGAGGGAGAGGCGTAACGGGGCGTGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCt < 2:7932661/150‑1 (MQ=255) aGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCt > 1:1031664/1‑150 (MQ=255) cccGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGt > 1:3716765/1‑150 (MQ=255) gTTCTTGTTTGTATCTCCCCGTGTTTGGTTTTGGGCGGCTTTGGGTAATTTGTCCGAGGTAGTGGCGTAATGGGGCGAGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTc < 2:6662219/150‑1 (MQ=255) cggtgtgGCTCTCCGCGTGTTCCGGCTGGGGCCGCTTTGGGGCCAGGGTCCGAGGGAGCGGCGTACCGGGGCGAGATCGGGGGGTGGGGGCGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCgg < 2:9159183/148‑1 (MQ=255) gtgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGTGGCGTACCGGGGCGAGCTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCtt < 2:3565668/150‑1 (MQ=255) gtgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCtt > 2:4943491/1‑150 (MQ=255) tgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTg > 1:410206/1‑150 (MQ=255) ggATCTCCCGGTGTTCCGGCTGGGGCCGCTTGGGGTATTTTGTCCGCGGGCGAGGCGTACTGGGGCGCGAGCGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGcaagc < 2:29432/150‑5 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 2:3109388/1‑150 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 2:56439/1‑150 (MQ=255) aTCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGccc > 1:5195302/1‑150 (MQ=255) tctcCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcg > 2:4265959/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 1:2016406/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCGTGCCCCCGaa > 1:3831467/1‑150 (MQ=255) ccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaaa > 2:8820409/1‑150 (MQ=255) ccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaaa < 2:2064260/150‑1 (MQ=255) cGTGTTCGGGCTTGGGCGGCTTGGGGTAATTGGCCCGCGGGCGCGGCGTAGGGGGGCGCGAGGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaaga < 1:3243667/150‑3 (MQ=19) cGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAg > 2:7089711/1‑150 (MQ=255) tttttACGGCTTGGGCCTCTTTGGGTAATTGGTCGGAGGGAGTGTCGTAACGGGGCGCGCTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAgg < 2:3196298/147‑1 (MQ=255) gtgtTCGGGCTTGGGCCGCGTTGGGGATCTTGTCCGCGGGCGTGGCGTACCGGGGGGTGAGGGGGGGGGGGGGGTGGTTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaagag < 1:7304806/150‑4 (MQ=19) ttACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc > 1:2724526/1‑150 (MQ=255) gcccGGCTTGGGCCGGTTGGGGGAATTGGTCCGCGGGCGCGGCGTCCCGGGGCGCGCGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc < 1:6585306/147‑1 (MQ=255) acgccctGGGCCGCCCTGGGCAAATTGACCGAGCGAGAGGCTAAAAGGGGCGAGATCGGGGGGTGGGGCAGCCAAAAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGt < 2:6627483/144‑1 (MQ=255) aCGGCTTGGGCGGCTTTGGGGAAAGTGCCCGCGGGAGAGGCGTACCGGGGCGCGCGGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGt < 2:2368813/150‑1 (MQ=25) aCGGCTGGGGCCGCTTTGGGGAATTTGTCGGAGGGTGAGGCGTACAGGGGCGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGt < 2:6280511/150‑1 (MQ=37) gCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCAGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTAc > 1:293787/1‑150 (MQ=255) ctggggCCGCTTTGGGGCAATGGGCCGCGGGCGCGGCGTCCCGGGGCGCGAGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGTTACa < 2:523529/147‑1 (MQ=21) cTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACa > 2:3434332/1‑150 (MQ=255) ggggCCGCTTTGGGGATATTGTCCGTGGGAGCGGCGTACCGGGGCGAGATCGGGGGGTGGGGGGGGGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGTTACAgg < 2:8089808/149‑1 (MQ=38) gggCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAAAGGCCACTTAGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGc > 1:3905803/1‑150 (MQ=255) ccGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTAc > 1:2207590/1‑143 (MQ=255) cGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAt > 1:2276746/1‑150 (MQ=255) gtttGGGGAACTCGGCCGCGGGAGTGGCGTCCTGGGGCGCGATGGGGGGGTGGGGGTGGCCATAAAGAATGCGTAAAAATCCGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAttg < 1:5524889/149‑1 (MQ=255) ttGGGTAACTTGTCCGCGGGCGTGGCGTACCGGGGCGCGAGGGGGGGGTGGGGGGGGTAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAttgtt < 1:2766906/150‑1 (MQ=255) gggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGc > 1:7669511/1‑113 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTGTAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg < 2:2709965/150‑1 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg > 1:5956524/1‑150 (MQ=255) tggccGCGGGTGTGGCGTACCGGGGCGAGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCGTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctg < 2:849515/147‑1 (MQ=255) tGTCCGTGGGAGAGGCGTACAGGGGCGTGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctg < 2:5807056/150‑1 (MQ=255) ggTCCGTGGGAGTGGCGTAAAGGGGCGTGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctg < 2:6425217/149‑1 (MQ=255) cGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGc < 2:5083065/56‑1 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg < 2:5315581/150‑1 (MQ=255) ggAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc > 1:8821021/1‑115 (MQ=255) ggCGTCAGGGGGCGTGATCGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTa < 1:7181600/150‑1 (MQ=255) gCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTAc > 1:837985/1‑150 (MQ=255) cggaaaGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTGGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGGTACAGGCTTCTGGTTGTGGCGGCTGCTGCGCCGCGTTACg > 2:5300943/4‑150 (MQ=39) gTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTTTGGCGGCTGCTGCGCCGCGTTACgg > 1:1580766/1‑150 (MQ=255) aaaGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCt > 2:7638211/1‑150 (MQ=255) aaGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtc > 2:1816893/1‑150 (MQ=255) | TGCGATCGGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTC > NC_002947/4707146‑4707443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |