| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,707,302 | A→C | 11.9% | intergenic (‑72/+105) | kdpF ← / ← PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,707,302 | 0 | A | C | 11.9% | 602.9 / 4.9 | 252 | intergenic (‑72/+105) | kdpF/PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (130/67); new base C (2/35); total (133/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.38e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
GGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAG > NC_002947/4707153‑4707451 | ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 1:7600324/150‑1 (MQ=255)ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 2:4255575/150‑1 (MQ=255)ggCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCga < 2:3522044/150‑1 (MQ=255) gcgcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCgag < 2:552633/150‑1 (MQ=255) gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:8279917/1‑150 (MQ=255) cagcagCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgg > 2:2134047/1‑150 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 1:593968/150‑1 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtggg < 1:2371049/150‑1 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgggg < 2:5750856/150‑1 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgggg > 2:663202/1‑150 (MQ=255) cagcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGggggtgggggtg < 1:1629177/150‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg < 2:303895/150‑1 (MQ=255) gcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGCGCTTGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGggtgggggtggg < 2:194995/150‑1 (MQ=255) gcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGggggggggtggg > 2:1536656/1‑150 (MQ=255) tAACACGCCAAGGCCACTGCCAGCAGCAGTGACCGCCCGTCGAGCATGTTCATGTGTGGATCTCCCGGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCGGCGGGAGCGGGGTACAGGGGCGTGATCGGGGGGTGGGGGTGGGTATaa < 2:320469/150‑1 (MQ=255) cGCCTATGCCACTGCCAGCAGCAGTGACAGCCCTTGTAGCTTGTTCTTGTGTGGATGTCCCCGTGTTAGGGCTTGGGCGGGTTTGGTGAAATTGTCGGTGGGAGAGGCGTATAGGGGCGTGTTCGGGGGGTGGGGGTGGGTATAAAGAAt < 2:5476171/150‑1 (MQ=255) cGCAAAGGCCACTGCCAGCTGCTGTGACAGCCGGTCGTGCTTGTTGTTTTGTGGTTCTCCCGGTTTTAGGGGTTGGGCGGCTTTGGGTAATTTGTCCGTGGGTGTGGCTTAACGGGGGGTGATGGGGGGGTGGGGGTGGGTATAAAGAAt < 2:8612770/150‑1 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATg > 2:6977934/1‑150 (MQ=255) ccAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGc > 2:824629/1‑150 (MQ=255) ccAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGGGGGGGGGGGTATAAAGGATGc > 2:3810030/1‑150 (MQ=255) aaTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGt > 1:3625107/1‑150 (MQ=255) aCTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAAt > 1:1367757/1‑150 (MQ=255) aCTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAAt > 2:1630291/1‑150 (MQ=255) cTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATc > 1:2166682/1‑150 (MQ=255) tGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATTGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCa > 2:5659130/1‑150 (MQ=255) agcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGt > 1:507477/1‑150 (MQ=255) agcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGt > 1:8384043/1‑150 (MQ=255) aggtgTGACAGGCCGTCGTGGATGTTCTTGTGTGGTTCTCGGCGTGTTAGGGCTTGGGCGGGTTTGGGGAATTTGTCGGAGGGAGAGGGGTAAAGGGGGGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgt < 2:7456107/146‑1 (MQ=255) gttgTGACTGCCGGTGGCGCCTGTTTTTGTGTGTTTCGCCCTTTGTTTGGGGTTGGGGGGGTTTGGGTACATTGTCGGTGGTTGTGGCTTACCGGGGCGCGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:4091/147‑1 (MQ=255) agTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGt > 1:5472708/1‑150 (MQ=255) agTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGGTGTggg > 2:2232748/1‑149 (MQ=255) tGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGTGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCt > 1:4557480/1‑150 (MQ=255) gACCGCCCTTCGAGTTTGTTCTTGTGTGGATCTCGCGGTTTTTGGGTTTGGGCCGCTTTGGGGAATTTTTCCTTGGGAGTGGCTTATCGGGGCGATCTGGGGGGGTGGGGGTGTGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTg < 2:3265265/150‑1 (MQ=255) cccgCCCGTCTAGCATGTTCTGGTGTGGATCTCCCCGTGTTAGGGCTTGGGCCGCTTTGGGGAATTTGTCCGAGGGAGAGGCGTAACGGGGCGAGCTGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGc < 2:6731915/147‑1 (MQ=255) ccAGCCCGTCGAGCTTGTTCTTGTGTGGATCTCCCCGTGTTAGGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGCGTGGCGTACCGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGc < 2:5999482/149‑1 (MQ=255) cgCCCGTCGTGCTTTTTCATGTGTGTATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGTATATTGTCCGAGGGAGAGGCGTATCGGGGCGAGATCGGGGGGTGGGGGTGGGCATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCt < 2:3670031/149‑1 (MQ=255) aGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCt > 1:1031664/1‑150 (MQ=255) cccGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGt > 1:7675852/1‑150 (MQ=255) gcgcttGTTCATGTGTGTATCTCCCGGTGTTCGGGCTTGGGCGGCTTTGGGGAATTTGCCGGTGGGTGAGGCGTAACGGGGCGAGATGGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGc < 1:6310281/145‑1 (MQ=255) gAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTATAACGGc > 1:43496/1‑150 (MQ=255) gCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCct > 2:1189808/1‑150 (MQ=255) tGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCtt > 2:2927510/1‑150 (MQ=255) ttgtgtgGCTCTCCCGGTGTTCCGGGTTGGGCCGCGTTGGGGATATTGTCCGTGGGCGGGGCGTCCGGGGGCGCGCCGGGGGGGTGGGGGGGGGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCgg < 1:8848142/149‑1 (MQ=255) tggtgtgtATCCCCCGGGGTTCGGGCTGGGGCGGGTTTGGGGAAGGGGCCGGCGGGCGCGGCGTCCCGGGGCGCGCGGGGGGGGGGGGGGGGGCAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCgg < 1:4611771/148‑1 (MQ=255) aTGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCgg > 1:3778766/1‑150 (MQ=255) gtgtgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGc > 1:2975647/1‑150 (MQ=255) gtgGATCTCCGGGTGTTCGGGCGTGGGCCGCTTTGTGGTATTTGGCCGAGGGTGCGGCTTATTGGGGCGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCtt < 2:5424575/150‑1 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 2:3109388/1‑150 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 1:6908633/1‑150 (MQ=255) aTCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGccc > 1:5195302/1‑150 (MQ=255) tctcCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcg > 2:4265959/1‑150 (MQ=255) ctcCCCGTGTTCCGGCTTGGGCGGCTTTGGGGAAATTGTCCGCGGGAGAGGCGTAACGGGGCGCGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcgc < 2:8020834/150‑1 (MQ=255) ctcCCCGTGTTCCGGCTTGGGCCGCTTTGGGGACCTGGTCCGTGGGCGCGGCGTAACGGGGCGCGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcgc < 2:3406466/150‑1 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 2:3748628/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 1:6087660/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCGTGCCCCCGaa > 1:3831467/1‑150 (MQ=255) cGTGTTCGGGCTTGGGCGGCTTGGGGTAATTGGCCCGCGGGCGCGGCGTAGGGGGGCGCGAGGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaaga < 1:3243667/150‑3 (MQ=19) cGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAg > 2:7089711/1‑150 (MQ=255) gggtTCCGGCTGGGGCCGGTGTGGGGAACTTGTCCGCGGGAGCGGCGTAACGGGGCGAGCGGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaagag < 1:7304671/148‑4 (MQ=25) gtTCCGGCTTGGGCGGCTTTGGGGAAATTGTCCGCGGGAGCGGCGTAACGGGGCGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGc < 2:1789893/150‑1 (MQ=255) ttccGGCGTGGGCCGCTTTGGGGAATTGGTCGGCGGCCCGGGCGTCAGGGGGCGAGCTCGGGGGGGGGGGGGGGCAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc < 1:7696988/147‑1 (MQ=255) ttACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc > 1:2724709/1‑150 (MQ=255) gcccGGCTTGGGCCGGTTGGGGGAATTGGTCCGCGGGCGCGGCGTCCCGGGGCGCGCGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc < 1:6585306/147‑1 (MQ=255) aCGGCTTGGGCGGCTTTGGGGAAAGTGCCCGCGGGAGAGGCGTACCGGGGCGCGCGGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGt < 2:2368813/150‑1 (MQ=25) ggCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGTGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTa > 1:2619140/1‑150 (MQ=255) gtggggCCCCTTGGGGTTAATTGCCCGTGGGTGCGCCTTACGGGGGCGAGCCGGGGGGGTGGGGGTGGGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACa < 1:2779832/147‑1 (MQ=255) ctggggCCGCTTTGGGGCAATGGGCCGCGGGCGCGGCGTCCCGGGGCGCGAGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGAAGAGGCCGTTACa < 2:523529/147‑1 (MQ=21) cctGGGCCGCTGTGGGGAACTGGGCCGCGGGCGCGGCGTACCGGGGCGAGAGCGGGGGGTGGGGGGGGGTATACAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACa < 2:636449/148‑1 (MQ=255) gggCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAAAGGCCACTTAGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGc > 1:3905803/1‑150 (MQ=255) gggCCGCTTGGGCGAACTTGTCGGCGGGAGAGGCGTACCGGGGCGCGGGGGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGc < 2:346676/150‑1 (MQ=255) tccGCTCTGGGGAAATTGGCCGCGGGTGAGGCGTACCGGGGCGAGATCGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCtt < 2:6459752/149‑1 (MQ=255) cGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAt > 1:2276746/1‑150 (MQ=255) gtttGGGGAACTCGGCCGCGGGAGTGGCGTCCTGGGGCGCGATGGGGGGGTGGGGGTGGCCATAAAGAATGCGTAAAAATCCGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAttg < 1:5524889/149‑1 (MQ=255) cTTTGGGGAACTGGTCCGAGGGAGAGGCGTAACGGGGCGCGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAttg < 2:8384043/150‑1 (MQ=255) ttGGGGAACGTGGCCGCGGGAGAGGCGTACCGGGGCGAGCTCGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTAttgtt < 2:3172190/150‑1 (MQ=255) ggggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATtgttgt > 2:2728448/1‑150 (MQ=255) ggggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGCGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATtgttgt > 2:5342784/1‑150 (MQ=255) gggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGc < 2:7669511/113‑1 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTGTAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg < 2:2709965/150‑1 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg > 2:8697325/1‑150 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg > 1:5956524/1‑150 (MQ=255) ttGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgct > 1:2013623/1‑150 (MQ=255) tggccGCGGGTGTGGCGTACCGGGGCGAGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCGTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctg < 2:849515/147‑1 (MQ=255) tGTCCGTGGGAGAGGCGTACAGGGGCGTGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctg < 2:5807056/150‑1 (MQ=255) tCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGgctgct > 2:7561455/1‑150 (MQ=255) cgtgggAGCGGCGTTTTGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCtgctgc < 2:1427597/147‑1 (MQ=255) cGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGc < 2:5083065/56‑1 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGCAAGGGCCGGTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 1:8076837/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 2:4510004/1‑150 (MQ=255) ggAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc < 2:8821021/115‑1 (MQ=255) cggaaaGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTGGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGGTACAGGCTTCTGGTTGTGGCGGCTGCTGCGCCGCGTTACg > 2:5300943/4‑150 (MQ=39) ttaccggggCGCGAGGGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTGGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg < 1:7115226/145‑1 (MQ=255) gTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTTTGGCGGCTGCTGCGCCGCGTTACgg > 1:1580766/1‑150 (MQ=255) aaGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtc > 2:1817421/1‑150 (MQ=255) aaGGCGCGAGATCGGGGGGTGGGGGTGCGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtc < 2:7924167/150‑1 (MQ=255) ggggCGCGCGCGGGGGGGGGGGGGGGCAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtcca < 1:6905658/150‑1 (MQ=255) gCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCCGAAAAATCAGCGTGGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGCAAGGGCCGGTACAGGCTGATTGTTGTGGCGGCTGCTGCGCCGCGTTACGCCtccaggc > 2:6895565/1‑148 (MQ=255) gagaTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtccagtcca > 2:9042128/1‑150 (MQ=255) gagaTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtccagtcca > 2:4649011/1‑150 (MQ=255) agaTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCtt > 1:7497825/1‑81 (MQ=255) | GGCGCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAG > NC_002947/4707153‑4707451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |