| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,717,084 | T→C | 69.3% | F116S (TTC→TCC) | PP_4173 → | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,717,084 | 0 | T | C | 69.3% | 320.9 / 198.6 | 238 | F116S (TTC→TCC) | PP_4173 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base T (45/28); new base C (78/87); total (123/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
CAACGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAGCGCCAGCAG > NC_002947/4716938‑4717229 | caacGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCa > 2:1859126/1‑150 (MQ=255) aacGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAg > 1:7758638/1‑150 (MQ=255) aacGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAg > 2:3159792/1‑150 (MQ=255) acGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAgg > 1:6824640/1‑150 (MQ=255) ctGCTTGAAGGGCTGATGCGTGCCACCCACAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGccc < 2:1689560/149‑1 (MQ=255) cTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCAtt > 2:6137191/1‑150 (MQ=255) ttGAAGGGCTGCTGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACCGGTCGAGGTGTCCCAGGCGCCCATTc < 2:531132/150‑1 (MQ=255) ttGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTc < 1:2733199/150‑1 (MQ=255) tGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGAAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCg > 2:3794184/1‑150 (MQ=255) gAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGc > 1:360612/1‑150 (MQ=255) aGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCt < 1:6066782/150‑1 (MQ=255) gggCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTg < 2:7012699/150‑1 (MQ=255) gCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTgca < 2:7696380/150‑1 (MQ=255) tGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTgcagc > 1:7992452/1‑150 (MQ=255) gATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTgcagca > 1:2852650/1‑150 (MQ=255) aTGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCaa < 2:2711306/150‑1 (MQ=255) tGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCaaa < 1:6319764/150‑1 (MQ=255) tGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCaaa < 2:1030536/150‑1 (MQ=255) gCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAAt > 2:3570859/1‑150 (MQ=255) gTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGAAACAGGTCGAGGTGTCCCAGGCGCACATTCGCCTGCAGCAAATcc > 1:3193354/1‑150 (MQ=255) tGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCg > 1:807425/1‑150 (MQ=255) gCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGc < 1:4470529/150‑1 (MQ=255) gCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGc < 2:6809492/150‑1 (MQ=255) gCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGc < 2:6094867/150‑1 (MQ=255) cACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCt < 1:7515932/150‑1 (MQ=255) cACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCt < 2:5510799/150‑1 (MQ=255) ccTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGa > 2:503479/1‑150 (MQ=255) tCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACa > 1:3624761/1‑150 (MQ=255) cAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACaa < 2:6414420/150‑1 (MQ=255) aGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAAc < 1:2226074/150‑1 (MQ=255) gCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACg < 2:8408567/150‑1 (MQ=255) tCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACt > 1:3106601/1‑150 (MQ=255) ccGCACGTGCGCTTTCTGTAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTc < 1:1033461/150‑1 (MQ=255) ccGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTc > 2:6403165/1‑150 (MQ=255) ccGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTc > 1:4743322/1‑150 (MQ=255) gCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCt > 2:3687904/1‑150 (MQ=255) gCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCt < 2:823061/150‑1 (MQ=255) cACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTg < 1:1943203/150‑1 (MQ=255) gTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCaa < 2:4260874/150‑1 (MQ=255) gTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCaa < 2:4416071/150‑1 (MQ=255) gcgcTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACa > 1:3436004/1‑150 (MQ=255) gcgcTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACa < 1:2221834/150‑1 (MQ=255) cgcTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAg < 2:807425/150‑1 (MQ=255) gcTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAgg > 2:2008479/1‑150 (MQ=255) gcTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAgg > 2:1399573/1‑150 (MQ=255) cTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCaaa < 1:832644/150‑1 (MQ=255) tGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATACGCCTGCAGAAAATCCGCCTGGACAACGACTTCCTGCAACAGTGCAAAg > 2:4612010/1‑150 (MQ=255) tGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAg < 1:1663131/150‑1 (MQ=255) gAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGcc > 2:1347763/1‑150 (MQ=255) aGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGccac < 2:2343504/150‑1 (MQ=255) aGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGccac < 1:6261458/150‑1 (MQ=255) gTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGccacc > 1:1168393/1‑150 (MQ=255) tGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGccacca < 2:3034432/150‑1 (MQ=255) gACAGCCGCAACCACATCCTGGTGTATGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCg > 2:8248784/1‑150 (MQ=255) gACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCg > 2:6769465/1‑150 (MQ=255) gACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCg < 2:6305146/150‑1 (MQ=255) gACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCg < 2:2047226/150‑1 (MQ=255) ccGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCAt > 2:778278/1‑150 (MQ=255) gCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCg > 2:5359747/1‑150 (MQ=255) cAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCgg > 1:8276338/1‑150 (MQ=255) ccACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGGCTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTga < 1:8162366/150‑1 (MQ=255) cacaTCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTgac > 1:7623617/1‑150 (MQ=255) aTCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTgacgac < 1:5638253/150‑1 (MQ=255) gtgtACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTg < 1:2012693/150‑1 (MQ=255) gtgtACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTg < 1:6537299/150‑1 (MQ=255) cGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGt < 1:8985863/150‑1 (MQ=255) cGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGt < 2:8021367/150‑1 (MQ=255) gCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAt > 1:7128183/1‑150 (MQ=255) gCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAt > 1:5060340/1‑150 (MQ=255) tCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAtcgtc > 2:1231659/1‑150 (MQ=255) tCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAtcgtc > 2:4694840/1‑150 (MQ=255) tCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAtcgtc < 1:5732328/150‑1 (MQ=255) tCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCAGTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGAtcgtc < 1:5591172/150‑1 (MQ=255) cgacgaAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCgg > 2:4598454/1‑150 (MQ=255) gacggAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGGGATCGTCGGc > 1:7884718/1‑150 (MQ=255) gacgaAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGc > 1:4376821/1‑150 (MQ=255) acgaAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCa > 2:5188716/1‑150 (MQ=255) acgaAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCa > 2:2501531/1‑150 (MQ=255) aaGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTc > 1:5465389/1‑150 (MQ=255) aaGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTc < 1:1859126/150‑1 (MQ=255) aaGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTc > 1:6916211/1‑150 (MQ=255) aaGTGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTc > 1:5016806/1‑150 (MQ=255) tGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGa > 2:3046066/1‑150 (MQ=255) tGCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGa > 1:226031/1‑150 (MQ=255) gCCAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGAt < 1:848295/150‑1 (MQ=255) ccAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATg > 2:7774866/1‑150 (MQ=255) ccAACCGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATg > 2:8880115/1‑150 (MQ=255) cAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGa > 2:8590854/1‑150 (MQ=255) aaCCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCGGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGAc < 2:6340540/150‑1 (MQ=255) ccGCGCGCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGc < 1:921369/150‑1 (MQ=255) cgcgcgCAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGcc > 2:7338731/1‑150 (MQ=255) cgcgcAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCtt < 1:4995930/150‑1 (MQ=255) cgcAACAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTtca < 1:5978198/150‑1 (MQ=255) aaCAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTtcagtc > 1:1369044/1‑150 (MQ=255) aaCAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTtcagtc > 2:5885790/1‑150 (MQ=255) cAGGTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTtcagtcag > 2:6885150/1‑150 (MQ=255) gTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAgcgc > 2:4916933/1‑150 (MQ=255) gTCGAGGTGTCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAgcgc < 1:2040695/150‑1 (MQ=255) gtgtCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAGCGCcagcag > 1:2328099/1‑150 (MQ=255) gtgtCCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAGCGCcagcag > 1:4042130/1‑150 (MQ=255) | CAACGAAGTGCTTGAAGGGCTGATGCGTGCCACCCTCAGCATCCCGCACGTGCGCTTTCTGGAAGTGCAGGACAGCCGCAACCACATCCTGGTGTACGTCGAGCAGTCCGACGAAAGTGCCAACCGCGCGCAACAGGTCGAGGTGTTCCAGGCGCCCATTCGCCTGCAGCAAATCCGCCTGGACAACGACTTCCTGCAACAGGGCAAAGCCACCAGCCCGGCCATCGGTGACGACTACCTGGGCCGCGTGATCGTCGGCATGTCCGATGACGCCTTCAGTCAGCGCCAGCAG > NC_002947/4716938‑4717229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |