| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,742,806 | C→G | 28.3% | intergenic (+75/+677) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,742,806 | 0 | C | G | 28.3% | 302.5 / 164.7 | 202 | intergenic (+75/+677) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (76/69); new base G (29/28); total (105/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.10e-02 | |||||||||||
Only 100 of 206 total aligned reads displayed.
AAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCA > NC_002947/4742657‑4742954 | aGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGcc < 1:5275336/150‑1 (MQ=255) cGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTACTGTTCCGGCCTCTTCGCGGCCTTGc > 2:285666/1‑150 (MQ=255) ggCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGcc > 2:7918438/1‑150 (MQ=255) gCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGccc < 1:8436429/150‑1 (MQ=255) cGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc < 1:700790/150‑1 (MQ=255) gTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCGTCGCGGCCGTGCCcccg > 1:8106647/1‑150 (MQ=255) tCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGa < 2:8115788/150‑1 (MQ=255) tCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGa < 1:1411329/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:8808365/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:4179600/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGaa < 2:6468858/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 1:3430623/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 1:1834827/150‑1 (MQ=255) ccGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGACCTTGCCCGCGaa < 1:2515173/150‑1 (MQ=255) cgcgCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGCag > 2:3046492/1‑150 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGACAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:6331927/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:8227874/150‑1 (MQ=39) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:5397398/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:7691907/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga > 2:3689831/1‑150 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:2943687/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 1:7448718/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:4721551/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 1:541082/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 2:1922818/150‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTAGCGGCCGTGCCCGCCAaga > 1:2541954/1‑150 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCACGTCGCGGCCGTGGCcccggcga > 1:7054195/1‑146 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTATTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 1:3694781/150‑1 (MQ=255) gcgcCAGCTGGACACCGGCGAGCAGCAGCGCGACCTCGGTGCCCTGACAGACCGCAAGTAAGCTGCAGTAGCCGAACGCCAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTGGTCCGGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 2:7606704/150‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCATTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAagag < 2:1348401/150‑1 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 2:6904883/150‑1 (MQ=255) ccAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc < 2:9000035/150‑1 (MQ=255) aGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGCACGCAAGAAGGCTGCCCCCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCg < 2:4940059/150‑1 (MQ=39) tGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCGCATACCCGCCGTGCCCCCGACGcggccggcc > 1:6460332/1‑149 (MQ=255) acacCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑g > 2:2161380/1‑150 (MQ=255) acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCACA‑Gac > 2:6288965/1‑150 (MQ=255) cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCGCGTCGCGGCCGGGGCCGCGCAGAGGCCGGCACC‑Gacac > 1:4731167/1‑150 (MQ=255) cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCGCGGGCCGCCTTTTTTATTTGTCCTGTGCCGGGCGCGTGGCGGGCGGGGCCCCGAGGAGGCCCGGaca‑caccc > 1:16923/1‑148 (MQ=255) aGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCACATAGCGGCCATGCCCGCGAAGAGGCCGGCACA‑GACACCACaa > 2:2315013/1‑150 (MQ=255) aGCAGAAGCGCGACAGCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCACGAAGGCTGCCCTCGGGCAGCCTTTTGTATTTGTCCTGTGCCGGCCTCGTCGCGGCCGTGCCCGCGCAGAGGCCGGCCCA‑GAcaccacca > 2:6781852/1‑148 (MQ=255) gCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACaaa > 2:885598/1‑150 (MQ=255) gAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAAcc > 2:4843741/1‑150 (MQ=255) gAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAAcc > 2:8063128/1‑150 (MQ=255) gAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCAAGCCCGCGCAGAGGCCGGCACC‑CACACCACCAAAcc > 2:3450003/1‑150 (MQ=255) aaGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAAcca > 2:3285258/1‑149 (MQ=255) aaGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCGTCGCGGCCGGGCCCGCGAACAGGCCCGCCCA‑CACCCCCCAAAAccg > 1:6554108/1‑149 (MQ=255) ccgcgACATCGTGGCCCTCAATGACCCAAAGTACGCTGCTTTACCCGACCGCAAGACGGCTGCCCTCGGGCTGCTTTTTTTTTTTCGCCTGTGCGGGCATCTTCGGGGCCTTGCCGGCGAAGTGGCCGGCACA‑GACACCACAAAACCTCa < 2:6186650/149‑1 (MQ=255) aaTCGTTGCCCTGAACCACCGCAAGAAAGCTGCAGTAGCCGAACGCACGACGGGTGCCCTCGGGCAGCATTTTTTATTGGTCCTGGGCGGGCCTGTTCGGGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGttttt < 2:7216377/149‑1 (MQ=255) ccTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCGTGCCCCCCCAGAGGCCGGCCCA‑CCCCCCACCACACCCCAGTTTTTCTacgcccg > 1:8827316/1‑150 (MQ=255) aCCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGGCGCTTCGCGGCCGTGCCCCCGAAGAGGCCGGCACC‑GACACCACAAAACCGCACATTTTATCCGCCCCCACACGcc > 1:6269607/1‑149 (MQ=255) aGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAg < 2:593759/150‑1 (MQ=255) ggctgTAGCCTAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGGCCTGTGCCGGCCTCTTCGCGGCCTTGCCGGCTAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGt < 2:2720665/146‑1 (MQ=255) gCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCCGCCTTTTTTATTTGTCCTGTGCCGGCCTCTACGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTa < 2:6022769/150‑1 (MQ=255) ccGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCAGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACg < 2:5302619/150‑1 (MQ=255) gAACGCAAGAAGGCTGCCCGCGGGCAGCCTTTTTTATTTGGCGTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGATGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:2672896/150‑1 (MQ=255) ataaaaaagGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACCCCACCAAACCTCCGTTTTTCTCCGCCCGCTCCCGCAGCCCGTTCAGGGGATTGGACGGCGCa > 2:8529610/7‑150 (MQ=255) aacagggcggcCCGCGGGCCGCTTTTTTTTTTTGCCGGGGGCGGGCCTCTGCGCGCCCGGCCCGGCCACGGGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATcc < 1:3912270/145‑1 (MQ=255) gacggCTGCCCTCGGGCAGCCTTTTTTTTTTGTCCGGGGCCGGCCTCTTCGGGGCCTGGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATccac < 2:118869/147‑1 (MQ=255) cggcggcCCTGGGGCCGCTTTTTTTTTTTGGCCGGTGCCGCCCTGTGGGCGGCCTGGCCCGCGACGCGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATccacca < 1:1258092/149‑1 (MQ=255) tGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCGCTTAGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAAACTCAGTTTTTATACGCCCGCACACGCAGCCCATTCAGGGTATTGAAAGGCGCATCCACCACGaa > 1:4424476/1‑150 (MQ=255) ggggCTGCTTTTTTTTTTGGTCGGGGGCGGGCCTCTGGGGGGCGGGGCCCGCGAGGTGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgtt < 1:3164634/149‑1 (MQ=255) cGGGCATCATTTTTTTTTGGTCGGGGGCCGGCCTGTCCGCGGCCGCCCCCGCGACGCGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgtt < 1:4617982/150‑1 (MQ=255) tcatttttttttttGTCTGGGGCCGGCCCCTGCGGGGCGTTGCGCGGCACGTGCCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGcca < 1:401207/146‑1 (MQ=255) acccTTTTTATTTTTTCCCGGGCCGGCCACTTCGCGGCCTTCCCGCCTACGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGcca < 1:3545500/148‑1 (MQ=255) ccTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCATGCCCGCGAAGTGGGCGGCACA‑GACACCACAAAACCTGAGTTTTTCTCCGCCCGCGGCCGCAGCCCGTGGAGGGTATTGAACGGCGCCACCACCCCGAACGTGTTGGccccc > 2:1115027/1‑150 (MQ=255) cattttttttttGGCCTGGGCCGGCCGCTTCGGGGCCTGGCCCGCTAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGccacc < 1:2096329/148‑1 (MQ=255) tttGTCCTGTGCCGGCCTCTTAGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAAACTCAGTTTTTATACGCCCCCTCACGCAGCCCGTTAAGGGTATTTAAAGGCGCATCCACCAAGAACTTTTTTGCCACCCTCGCCGGc > 1:2177638/1‑150 (MQ=255) ttGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCa < 2:9150768/150‑1 (MQ=255) gccTGGGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGc < 2:8786572/149‑1 (MQ=255) cTGTGCCGGCCTTTTCGCGGCCTTGCCCGCTAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTa < 1:285666/150‑1 (MQ=255) ccTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACG‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGc > 2:8315631/1‑150 (MQ=255) ctctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGc > 1:6231487/1‑150 (MQ=39) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 1:4992875/1‑150 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 2:660384/1‑150 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt < 1:5988294/150‑1 (MQ=255) ctctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCt > 2:3460786/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:6539541/1‑150 (MQ=255) tctTCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:2080441/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTCTTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:5832802/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:723539/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 1:733684/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:40212/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:39765/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:7824794/1‑150 (MQ=255) tctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTc > 2:7824287/1‑150 (MQ=255) ctTCGCGGCCTTGCCCGCTAAGCGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg < 2:16923/150‑1 (MQ=255) ctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATcc > 2:4533869/1‑102 (MQ=255) ctTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCg > 1:8025852/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCTGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:8719917/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:7081488/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 2:8404103/1‑150 (MQ=255) ttCGCGGGCAAGGCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:154824/1‑150 (MQ=255) ttCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCgg > 1:2421122/1‑150 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:3624183/150‑1 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:8984367/150‑1 (MQ=255) tCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 2:5196139/150‑1 (MQ=255) gcgcgGCCTGGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgt < 1:5059971/149‑1 (MQ=255) gcgGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGgtgt > 1:201562/1‑150 (MQ=255) cgGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGtgtg > 2:5648222/1‑150 (MQ=255) gCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTATCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCa > 1:5747462/1‑150 (MQ=255) | AAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACA‑GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCA > NC_002947/4742657‑4742954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |