Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,863,153 T→C 9.2% intergenic (‑137/+100) ligA ← / ← PP_4275 DNA ligase/cell division protein ZipA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,863,1530TC 9.2% 637.6 / 36.8 220intergenic (‑137/+100)ligA/PP_4275DNA ligase/cell division protein ZipA
Reads supporting (aligned to +/- strand):  ref base T (135/62);  new base C (5/15);  total (141/79)
Fisher's exact test for biased strand distribution p-value = 2.83e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-02

Only 100 of 224 total aligned reads displayed.

TTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGG  >  NC_002947/4863004‑4863301
                                                                                                                                                        |                                                                                                                                                    
tttCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACAAGCCCTAGGGCGGGGATGt                                                                                                                                                      >  1:4434709/1‑150 (MQ=255)
  tCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                                                                                    <  2:8434926/150‑1 (MQ=255)
  tCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAc                                                                                                                                                    <  1:3798055/150‑1 (MQ=255)
    ggcggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATTTAACt                                                                                                                                                  <  2:4969036/150‑1 (MQ=255)
    ggcggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCt                                                                                                                                                  <  1:8795200/150‑1 (MQ=255)
      cggTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGt                                                                                                                                                <  1:6210159/150‑1 (MQ=255)
        gTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAg                                                                                                                                              <  2:3377059/150‑1 (MQ=255)
            tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCACCCACAAGGGCGTCACATGCCCAAGGGCGGTGATGTACCGGTAGGAGc                                                                                                                                          >  2:2248823/1‑150 (MQ=255)
            tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCACCCACAAGGGCGTCACATGCCCAAGGGCGGTGATGTACCAGTAGGAGc                                                                                                                                          >  1:7422507/1‑150 (MQ=255)
            tGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAAAACCCACCCACAAAGGCGTCACAATCCCAAGGGCGGGGATGTAACAGTATGAGc                                                                                                                                          >  1:4649316/1‑150 (MQ=255)
             gggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCg                                                                                                                                         >  2:5906343/1‑150 (MQ=255)
              ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTGAACCCCCACCCACAACGGCGGCAAATGCCCACGGGCGGGGGTGTAACTGGTGGAGccg                                                                                                                                        >  1:8420847/1‑148 (MQ=255)
              ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                        >  2:43006/1‑150 (MQ=255)
              ggATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                        <  1:9138867/150‑1 (MQ=255)
               gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTACATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCggg                                                                                                                                       <  1:8367378/150‑1 (MQ=14)
               gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCggg                                                                                                                                       <  2:1857871/150‑1 (MQ=255)
               gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCggg                                                                                                                                       <  2:7165788/150‑1 (MQ=255)
               gATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCCTGAGGGCGTGCTGGCCGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCgg                                                                                                                                        <  1:2046957/150‑1 (MQ=37)
               gATTTGTCGTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCggg                                                                                                                                       <  2:7991844/150‑1 (MQ=255)
               gATTTGTATTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTACATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCggg                                                                                                                                       <  1:7592946/150‑1 (MQ=14)
                aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGt                                                                                                                                      <  1:7090696/150‑1 (MQ=255)
                aTTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGt                                                                                                                                      >  2:5720400/1‑150 (MQ=255)
                  ttGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTACATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCGGGttt                                                                                                                                    <  2:312793/150‑1 (MQ=14)
                   tGTCTTCTCTTGCAATGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAAACCGCTCCCACAAGGGCGTCACATGGCCTATGGCGGTGTTGTACCTGTAGGAGCGGGTTTa                                                                                                                                   >  2:1013542/1‑150 (MQ=255)
                   tGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTa                                                                                                                                   <  1:3529670/150‑1 (MQ=255)
                    gTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTACATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCGGGTTTAc                                                                                                                                  <  2:1049417/150‑1 (MQ=14)
                     tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTAcc                                                                                                                                 >  2:7743231/1‑150 (MQ=255)
                     tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTAcc                                                                                                                                 >  2:5039004/1‑150 (MQ=255)
                     tcttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCGGTAGGCGCGGGTTTAcc                                                                                                                                 >  2:7085723/1‑150 (MQ=255)
                      cttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTAccc                                                                                                                                <  2:2573682/150‑1 (MQ=255)
                      cttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTAccc                                                                                                                                <  2:2720291/150‑1 (MQ=255)
                       ttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCcg                                                                                                                               >  2:6822529/1‑150 (MQ=255)
                       ttctCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCGGTAGGAGCGGGTTTACCcg                                                                                                                               >  1:3744103/1‑150 (MQ=255)
                         ctctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTTAAACAGCGCCCACAAGGGCGTGACATAACCAAGGGCGGGGATGTAAAGGGAGGAGAGGGttttcacccg                                                                                                                             >  1:7789607/1‑143 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTGCACCCGCCCCCCCACGGGCGTCACAAGCCCGAGGGCGGTGTTGTAACGGTAGGGGCGGGGTTTACCGCGa                                                                                                                            >  1:7031794/1‑150 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCCCAAGGGCGTCACAATCCCTAGGGCGGTGATGTACCAGTAGGGGCGGGTTTAACCGCGa                                                                                                                            >  2:2730547/1‑150 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                            >  2:6566248/1‑150 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                            >  2:7349459/1‑150 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCAAATGCCCTAGGGCGGTGATTTACCTGTAGGAGCGGGGTTAACCGCGa                                                                                                                            >  1:2075651/1‑150 (MQ=255)
                          tctTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAAACCGCTCCCACAATGGGGTCACATGCCCTAGGGCGGTGATGTTGCTGTTGGTGGGGGTTTTCCCGCGa                                                                                                                            >  1:8903979/1‑150 (MQ=255)
                            ttGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCGGTAGGAGCGGGTTTACCCGCGAag                                                                                                                          >  2:7644688/1‑150 (MQ=255)
                            ttGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGGCACATGCCCGATGGCGGTGCGGTACCGGGGGGCGCGGGTTTACCCGCGAag                                                                                                                          >  1:4375027/1‑150 (MQ=38)
                              gcaaagcaaaATAGCCGCTTGGGGTGGTGCGGGGGGTTCCCGGGGTCTGTTGACTGTGCCAGCCTCTGCGCGGGTAACCCCGCCCCCACACGGGCGTCACATGCCCTCGGGGGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAagag                                                                                                                        <  2:1102353/150‑1 (MQ=255)
                                aaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGGGATGTACCGGGAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                      >  1:6695053/1‑150 (MQ=255)
                                aaagcaaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAAACCGCTCCCACAAGGGCGTCACATTCCCTAGGGCGGTGTTGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                      >  1:5945873/1‑150 (MQ=255)
                                    caaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGGAAAACCCCTCCCACAAGGGCGGCCCAATCCCGAGGGCGGGGATGTACCGGTGGGAGCGGGTTTAACCGCGAAGAGGCCGGc                                                                                                                  >  1:3575423/1‑150 (MQ=255)
                                    caaaAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGGAAAACCCCGACCACAACGGCGTCACAAGCCCGAGGGGGGGGGGGTAACGGTGGGGGCGGGGTTAACCGCGAAGcggccggc                                                                                                                  >  1:6216209/1‑150 (MQ=255)
                                      aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTTAACCCGCTCCCACAAGGGCGGCACATGCCCTAGGGCGGTGATGTACCGGTTGGAGCGGGTTTTACCCCGCAGAGGCCGGcac                                                                                                                >  1:5157332/1‑150 (MQ=255)
                                      aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac                                                                                                                >  2:4632369/1‑150 (MQ=255)
                                      aaaGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGGGAAACCCCGCCCCCAAGGGCGGCCCCGGCCCCAGGGCGGGGGTGTTCCGGGAGGGGCGGGGTTACACCCGAAGAGggcggccc                                                                                                                >  1:121939/1‑148 (MQ=255)
                                           gctgcTTGGGGTGGTGCGTGGGGTTCCCGGTGTCTGTTGCCTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACACGGGCGTCACTGGCCCTTGGGGGGTGATGTACCTGTCGGTGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCa                                                                                                           <  2:3575423/147‑1 (MQ=37)
                                             agcTTGGGGTGGTGCGTGGGGTTCCTGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAac                                                                                                         <  2:6694414/150‑1 (MQ=255)
                                             agcTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCGAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAac                                                                                                         >  2:4740935/1‑150 (MQ=255)
                                                    ggtggtGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTGAACCCCCGCCCACAAGGGCGGCACATGCCCAAGGGCGGTGATGTACCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCCCAGGCAACCACGATa                                                                                                  >  1:2798588/1‑150 (MQ=38)
                                                          gCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCCCGCCCCCAACGGCGGCACAAGCCCAAGGGCCGGGAAGTACCGGTAGGAGCGGGGTTACCCCCCAAGAGGCCCGCACACGCCACCACGAAACCCCaa                                                                                            >  1:5234041/1‑150 (MQ=255)
                                                                       aGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGAATCCCGAACCGGCCCGCACg                                                                                >  2:1329628/1‑150 (MQ=255)
                                                                             cttttcaCTGTCCCACCCTCTACCCGTCTAAACCCGCACCCACAAGGCCTTCACATCCCATAGGGCGGTTATTTACATTTAGTAGCGTTTTTACCCGCCAAGAGGCCGGAACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCa                                                                          <  2:1999714/144‑1 (MQ=255)
                                                                                  gACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCGAGGGCGGGGATGTACCGGTAGGAGCGGGGTTACCCGCGGAGAGGCCGGCACAGGCCACGACGATACCCCAACCGGCCAGCCCGCCCACAGgcgg                                                                     >  2:4869954/1‑148 (MQ=38)
                                                                                             ccTCTTCGGGGTTAACCCCGCCCCCCCATGGGCGCAACATGCCCTTGGGCGTTGATGTACCTTTAGGAGGGGTTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCt                                                          <  2:2776787/150‑1 (MQ=255)
                                                                                                ctTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCggg                                                                                                                                       <  1:5663207/70‑1 (MQ=255)
                                                                                                 ttCGGGGGCAAACCCTCTCCCACAAGGGCGTCACATGCCCTAGGGCGTTTATTTACCTGTAGTAGCGGGTTTACCCGCGAAGTGGCCGGCACATGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGAt                                                      <  2:9135782/150‑1 (MQ=255)
                                                                                                 ttCGCGGGTAAACCCGCGCCCCCCAGGGCGTCACATGCCCTAGGGCGGTGAGGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGAt                                                      <  2:5156529/150‑1 (MQ=255)
                                                                                                   ggcgGTTAACCCCGCCCCCACTGGGGCTCCACAGGCCCTTGGGGGGTTTTTTCCCTGTTGGTGGGGTTTAACCGGCTAAGCGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCt                                                    <  1:2937173/149‑1 (MQ=255)
                                                                                                   cgggggTAACCCCGCCCCCACAGGGGCGCCCCCGGCCCTTGGGGGGTGTTGTCCCTGTGGGTGGGGGTTTCCCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCt                                                    <  2:6183060/147‑1 (MQ=255)
                                                                                                    ggggggAAACCCGGCCCCCACCCGGGCTTCACATGCCTTTGGGGGTTTATGCACGTGTCGGTGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCt                                                    <  2:3954385/148‑1 (MQ=255)
                                                                                                    gcgGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTg                                                   >  1:3135993/1‑150 (MQ=255)
                                                                                                    gcgGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTg                                                   >  1:7222634/1‑150 (MQ=255)
                                                                                                      gggTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTc                                                 >  1:7209063/1‑150 (MQ=255)
                                                                                                      gggTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTc                                                 >  1:7284365/1‑150 (MQ=255)
                                                                                                      cggTAAACCCGGCCCCCCCACGGGCTTCAATGGCCCTGGGGGGGTTTTGTACGTGTTGGCGGGGTTTTACCCGCTAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGt                                                  <  2:1719709/149‑1 (MQ=255)
                                                                                                       gttAAACCCGCCCCCACCCGGGCGTCACTGGCCCTTGGGGGGTGTTGTACCTGTCGGAGGGGTTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                <  2:2677690/148‑1 (MQ=255)
                                                                                                       ggaacaCCCGCCCCCACCCGGGCGTCACAGGCCCTCGGGGGTTGTTGACCGTGTAGGCGGGGTTTAACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCa                                                <  2:1574888/145‑1 (MQ=255)
                                                                                                         tAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGGGGTGTTGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgc                                              <  2:4524914/150‑1 (MQ=255)
                                                                                                          aaaCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgcg                                             >  2:4780932/1‑150 (MQ=255)
                                                                                                          aaaCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgcg                                             >  2:8985171/1‑150 (MQ=255)
                                                                                                          aaaCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgcg                                             >  2:3305422/1‑150 (MQ=255)
                                                                                                           aaCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAgcgc                                            >  1:5267026/1‑150 (MQ=255)
                                                                                                            aCCCGCTCCTACAGGTACATCACCGCCCTAGGGCATGTGACGCCCTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCt                                           >  2:5609756/1‑150 (MQ=14)
                                                                                                            aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCt                                           >  2:8271483/1‑150 (MQ=255)
                                                                                                            aCCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCt                                           >  2:8714532/1‑150 (MQ=255)
                                                                                                             accGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTAACTGTAGGAGCGGGTTTACCCGCGAAGATGCAGGCACAGGCAACGACGATACACGAACCGGCCAGCAATCCCTCAGGATGCTCTTTCGTCTGGATCTGTCAGCGCtt                                          >  2:2763937/2‑150 (MQ=38)
                                                                                                              ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCTCAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                         >  2:3263712/1‑150 (MQ=255)
                                                                                                              ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                         >  2:6489889/1‑150 (MQ=255)
                                                                                                              ccGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTc                                         >  2:8832685/1‑150 (MQ=255)
                                                                                                                   tCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTggg                                     >  1:6250696/1‑150 (MQ=255)
                                                                                                                     ccACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGtt                                   >  1:2167764/1‑150 (MQ=255)
                                                                                                                      cacaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAgg                                                                        >  2:2877530/1‑112 (MQ=255)
                                                                                                                       acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTggg                                     <  1:7816053/146‑1 (MQ=255)
                                                                                                                       acaAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAg                                 >  1:3381607/1‑150 (MQ=255)
                                                                                                                          aGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAgcgc                              >  2:885140/1‑150 (MQ=255)
                                                                                                                           gggCGTCACATGCCCTAGGGGGGTTTTGTCCCTTTAGGAGCGGTTTAACCCGCGATGTGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCa                             <  1:6822529/150‑1 (MQ=255)
                                                                                                                               gTCACATGCCCTAGGGCGGTGACGCCCTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACACGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgc                         >  1:1878261/1‑150 (MQ=38)
                                                                                                                                  caccgCCCTAGGGCATGTGACGCCCTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGgcgc                       >  1:6346179/5‑150 (MQ=25)
                                                                                                                                   caggCCCTTGGGGGGTTTTTTACCTGTTGGTGGGGTTTTACCCGCGAAGTGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTc                     <  1:8241344/147‑1 (MQ=255)
                                                                                                                                    aTGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCg                    >  2:6096838/1‑150 (MQ=255)
                                                                                                                                       cccTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAAc                 >  1:6538641/1‑150 (MQ=255)
                                                                                                                                        ccTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACt                >  2:7496089/1‑150 (MQ=255)
                                                                                                                                        ccTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACt                >  2:4163963/1‑150 (MQ=255)
                                                                                                                                        ccTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACt                >  2:6168545/1‑150 (MQ=255)
                                                                                                                                                      tGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTg   >  2:9086533/1‑150 (MQ=255)
                                                                                                                                                        |                                                                                                                                                    
TTTCGGCGGTCATGGGATTTGTCTTCTCTTGCAAAGCAAAAGAGCAGCTTGGGGTGGTGCGTGGGGTTCCAGGTGTCTGTTGACTGTGCCAGCCTCTTCGCGGGTAAACCCGCTCCCACAAGGGCGTCACATGCCCTAGGGCGGTGATGTACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGACGATACCCGAACCGGCCAGCACGCCCTCAGGCTGCTCTTTCGTCTGGATCTGTCAGCGCTTCTGGGTTAGCGCACGGCGCTCGAACTCGACGATACGCTGG  >  NC_002947/4863004‑4863301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: