| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,909,993 | G→C | 5.7% | intergenic (‑2/‑280) | PP_4317 ← / → PP_4318 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,909,993 | 0 | G | C | 5.7% | 592.2 / 21.7 | 209 | intergenic (‑2/‑280) | PP_4317/PP_4318 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base G (98/96); new base C (5/7); total (103/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 211 total aligned reads displayed.
GTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAA > NC_002947/4909845‑4910142 | gttgttGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGa > 2:7350790/1‑150 (MQ=255) ttgttgCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGAt < 2:6767616/150‑1 (MQ=255) gttgctgttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGc > 1:6196299/1‑150 (MQ=255) tgctgttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGccc < 1:8314633/150‑1 (MQ=255) tgctgttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCGTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGccc < 2:8029266/150‑1 (MQ=255) tgttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTc > 1:7588190/1‑150 (MQ=40) gttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCa < 2:1127966/150‑1 (MQ=255) gttgctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCa < 1:8987788/150‑1 (MQ=255) gctgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgc < 2:3850512/150‑1 (MQ=39) gctgttgcCGTTGCCGTTGCCGTTGCCGGTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCTAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATCCATGCCCGTCacct < 1:7292000/150‑4 (MQ=14) tgttgcCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcgc > 2:4544000/1‑150 (MQ=38) gttgccgttgccgttgccgttgccgttgccGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:6512578/150‑1 (MQ=37) gttgccgttgccgttgccgttgccgttgccGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt > 2:4464981/1‑150 (MQ=37) gttgccgttgccgttgccgttgccgttgccGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:3310896/150‑1 (MQ=37) ttgccgttgccgttgccgttgccgttgccgTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTg > 2:1993725/1‑150 (MQ=37) tgccgttgccgttgccgttgccgttgccgtTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a < 1:5137194/150‑1 (MQ=37) tgccgttgccgttgccgttgccgttgccgtTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGACGCCCGTCAAGCGCTG‑a < 1:4192877/150‑1 (MQ=37) gccgttgccgttgccgttgccgttgccgttGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑Ag < 1:1849009/150‑1 (MQ=37) tgccgttgccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGcccc < 1:1793998/150‑1 (MQ=37) gccgttgccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCa < 2:3674805/150‑1 (MQ=37) cgttgccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGCGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAgg > 2:8617991/1‑150 (MQ=37) cttgccgttgcccttgccgatgATCTTGATCTAGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGCCCCCAGGa < 2:5203000/149‑1 (MQ=255) ttgccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCAGGAt < 2:7611329/150‑1 (MQ=37) tgccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATg < 1:7478307/150‑1 (MQ=37) ccgttgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATggg < 1:6820083/150‑1 (MQ=37) tgccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCATCAAGCGCTG‑AGGCCCCAGGATGGGGCCt < 1:5178671/150‑1 (MQ=37) gccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCtt < 2:4892654/150‑1 (MQ=37) ccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCTGGGGCCtca < 1:5274756/150‑3 (MQ=255) ccgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCTGGGGCCtca < 1:3022996/150‑3 (MQ=255) cgttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCg < 2:2043462/150‑1 (MQ=35) gttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCgg > 1:4092940/1‑150 (MQ=35) ttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGCGGCAGGTGCCGGGCATGGATGCCCGTCAAGCGCCGAAGGCCCCATCCTGGGGCCtcagc < 1:2552360/150‑5 (MQ=11) ttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGgc < 1:8828520/150‑1 (MQ=34) ttgccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCATGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGTTGACGGGCATGGATGCCCGTCAAGCGCCGAAGGCCCCATCCTGGGGCCtcagc < 1:8378068/150‑5 (MQ=11) gccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGgcgc < 2:8076911/150‑1 (MQ=32) ccgttgATCTTGGTCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCTGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGcgcg < 1:3826497/150‑1 (MQ=17) ccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGcgcg < 1:4367416/150‑1 (MQ=32) ccgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGcgcg > 2:3230997/1‑150 (MQ=32) cgttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCgg > 1:4839053/1‑150 (MQ=31) gttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGt > 1:3157517/1‑150 (MQ=11) gttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGt > 1:2491597/1‑150 (MQ=11) gttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGt > 1:1979240/1‑150 (MQ=11) gttgATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGt > 1:5371620/1‑150 (MQ=11) ttgatcttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGCGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCg < 1:231565/150‑1 (MQ=11) tgatcttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGa < 2:5775418/150‑1 (MQ=31) gctcttgatgttgttctggctcttgatcttgttcttCGCGCCTTGTGGAGGCCGAACGCTGGCCTTGCGGTGGCAGGGGACGGGCTTGGATGCCCGTCAAGCGCGG‑AGGCCCCTGGTTGGGGGCGTCGGCGCGGTCCTGCCGGGAGCGAg < 2:3149185/148‑1 (MQ=11) gatcttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAg > 1:116619/1‑150 (MQ=32) cttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGTGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGcc > 1:6682160/1‑150 (MQ=17) cttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGcc > 1:2048131/1‑150 (MQ=32) cttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGcc > 1:414786/1‑150 (MQ=32) ttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCg > 1:6735697/1‑150 (MQ=32) ttgatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCg > 1:1679991/1‑150 (MQ=32) gatcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGa > 2:6963039/1‑150 (MQ=32) atcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAg < 2:704602/150‑1 (MQ=32) tcttgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGt < 1:1092110/150‑1 (MQ=32) tgatcttgatctttatcttgatcttCGCGACTTCTGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCATGCGCTT‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAg < 1:8617991/150‑1 (MQ=255) tgatcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAg > 1:3324275/1‑150 (MQ=32) gatcttgatcttgatcttgatcttCGCGACTTCCGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAgg < 1:8457842/150‑1 (MQ=17) tcttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAgggg > 1:5994609/1‑150 (MQ=32) ttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGAc > 1:738913/1‑150 (MQ=32) ttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGa > 1:452751/1‑150 (MQ=32) tgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGag > 1:6441974/1‑150 (MQ=32) tgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGag > 2:3989909/1‑150 (MQ=32) atcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGagcg > 1:3557183/1‑150 (MQ=32) ttggcgACTTCTGGAGGCCTAACGCAGGCCTTGCGTCGGCTGGTGAGGGGCATGTATGCCCGAAAAGGGCTG‑AGGCCCCTGTATGGGGCTTTCGGCGGGGTCCTGCCGGGAGCGAGGCCGGAGTGTGGGGACCCCGGAGCGCAGCGCAgg < 2:4140864/147‑1 (MQ=11) ttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAgg > 1:4801220/1‑150 (MQ=32) ggACTTCCGGCGGCCGACCGCCGGCCTTGCGGCGGCTGGTGACGGGCTTGGCTGCCCGTCAAGGGCTG‑TGGCCCCCGGCTGGGGCCTTCGGCGGGGTCCTGCGGGGAGCGCGGCCGGCGTGCGGGGACCCCGGAGCGCAGCGCAGGGGcc < 1:3701690/149‑1 (MQ=11) cgACTTCAGGTGGCCGACCGCAGGCCTTGCGGTGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCTGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGTGGCCGGCGTGAGGGGACCCCGGAGCGCAGCGCAGGGGcc < 1:8296802/150‑1 (MQ=11) cgACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGcc > 2:4212700/1‑150 (MQ=32) gACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCg > 2:3783046/1‑150 (MQ=32) ttCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGgat > 2:6887558/1‑150 (MQ=32) ttCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGgat > 2:2688580/1‑150 (MQ=32) ggaggCCGACCGCAGGCCTTGCGGAGGCAGGTGCGGGGCTTGGAGGCCCGACAAGGGCTG‑CGGCCCCAGGATGGGGCCTTGGGCGCGGTCCTGCGGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGatgatg < 2:3952489/150‑1 (MQ=11) gaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATgg > 1:5666830/1‑150 (MQ=32) ggcggcccGCCGGCGTGGCGGCGGCCGGGGCCGGGCAGGGCGGCCGGTCCCGCGCGG‑CGGCCCCGGGCGGGGGCCGTCGGCGCGGCCCTGCCGGGAGCGCGGCGGGAGGGCGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa < 2:1189334/143‑1 (MQ=2) ggCCGAACGCCGGCCTTGCGGAGGCTGGTGCGGGGCATGGTGGCCCGTCAAGCGCTG‑AGGCCCCCGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa < 2:8543205/150‑1 (MQ=11) ggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa < 2:8260771/150‑1 (MQ=32) gCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAg > 2:5818538/1‑150 (MQ=32) cGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAgcg > 1:3066504/1‑150 (MQ=32) gAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAgcgc > 2:2441044/1‑150 (MQ=32) aaCGCAGGCCTTGCGGCGGCCGGGGCCGGGCCGGGATCCCCGCCACGCGCTG‑CGGCCCCCGGCTGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGCGGCCGGCGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCa < 2:2363941/150‑1 (MQ=11) gCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttt > 1:6129618/1‑150 (MQ=32) cTTGCGGTGGCCGGGGACGGGCATGGATGCCCGTCAAGCGCTG‑TGGCCCCTGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttttt < 2:7852797/150‑1 (MQ=11) cTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttttt > 2:5350318/1‑150 (MQ=32) ttGCGGTGGCTGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCTGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTg < 2:4649804/150‑1 (MQ=255) ttGCGGTGGCAGGTGCCGGGCATGCCTGCCCGTCACGCGCTG‑CGGCCCCTGGTGGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGTGGCCGGCGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTg < 1:708762/150‑1 (MQ=11) ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCCTCGGCGCGGTCCTGCCGGGAGCGAGGCCg < 2:8865421/90‑1 (MQ=18) ttGCGGAGGCAGGTGACGGGCAGGGATGCCCGTCACGCGCTG‑AGGCCCCCGGAGGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGCGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTg < 2:1679991/150‑1 (MQ=11) gCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGt > 2:7660500/1‑150 (MQ=32) cGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGtt > 1:2124152/1‑150 (MQ=32) gtggCTGGTGCCGGGCTTGGATGCCGGTAACGCGGGG‑CGGCCCCCGTTGGGGGCTTTCGGCGGGGTCGGGCGGGGTGCGCGGCGGGTGTGCGGGGACCCCGGAGCGCAGCGCAGGGGCCGGTTGATGGGAGCGCAGCGTTTTTTGGTTAc < 1:8059195/148‑1 (MQ=2) gAGGCAGGTGACGGGCCTGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTGGTTGGTTAc > 2:468036/1‑150 (MQ=12) gAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTAc < 2:6579022/150‑1 (MQ=32) ggCTGGTGACGGGCTTGGTGGCCCGTCACGCGCTG‑TGCCCCCCGTCGGGGGCCTTCGGGGCGGTCCTGCGGGTTGCGCGGCGGGTGTGCGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACtt < 1:6531684/150‑1 (MQ=11) gcttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACttttt > 2:7579356/4‑150 (MQ=12) aGGTGACGGGCATGGTTGCCCGTCATGCGCTG‑TGGCCCCTGGTTGGGGCCTTGGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACttttt < 2:4153678/150‑1 (MQ=11) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGACGCGt > 2:7960498/1‑150 (MQ=17) ggCTTGGTTGCCCGTAATGCGCTG‑AGGCCCCTGGATGGGGCCTTCGGCGCGGTCCTGCCGGTTGCGAGGCCGGTGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGtt < 2:4092940/150‑1 (MQ=11) ggATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 1:1446768/1‑150 (MQ=32) gATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaa > 1:398953/1‑150 (MQ=32) | GTTGTTGCTGTTGCTGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCGAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAA > NC_002947/4909845‑4910142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |