| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,938,595 | G→C | 5.6% | intergenic (‑39/‑379) | flhA ← / → PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,938,595 | 0 | G | C | 5.6% | 1077.5 / 37.8 | 321 | intergenic (‑39/‑379) | flhA/PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (165/137); new base C (8/10); total (174/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 335 total aligned reads displayed.
AACATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTAC > NC_002947/4938447‑4938743 | tcatcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCt > 2:3384840/1‑150 (MQ=34) tcatcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCt < 1:5499807/150‑1 (MQ=34) atcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTgg < 1:5183281/150‑1 (MQ=35) atcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTgg < 2:6926102/150‑1 (MQ=255) tcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTggg > 1:5424000/1‑150 (MQ=35) catTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGc < 2:7438160/150‑1 (MQ=37) cgtGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCg < 2:8402347/148‑1 (MQ=255) ttGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGt < 1:4826375/150‑1 (MQ=38) gCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTgg < 1:5355644/150‑1 (MQ=40) cAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCt > 1:2321536/1‑150 (MQ=255) cAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCGtcaaa < 1:8360597/150‑5 (MQ=255) aaCATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGCTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCtt > 1:8538974/1‑150 (MQ=255) aaCATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGGTGGTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCtt > 2:6589136/1‑150 (MQ=255) cagcagCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaagaa > 2:3098347/1‑150 (MQ=255) gcagcaACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGc > 1:6957657/1‑150 (MQ=255) caACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGGTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCCAGAAGCTTTc > 2:5789854/1‑150 (MQ=255) ggCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACttt < 2:8024890/150‑1 (MQ=255) aCCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGc < 1:6419040/150‑1 (MQ=255) ccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAg > 1:7385933/1‑150 (MQ=255) cccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaag < 1:3254701/129‑1 (MQ=255) ccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGac > 1:3417321/1‑150 (MQ=255) cAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGaca > 2:4431054/1‑150 (MQ=255) aGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGacac > 2:5398318/1‑150 (MQ=255) gCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca < 2:2386735/150‑1 (MQ=255) aacctggCCGGGCTCGGCCGGGGTGTTGCGGGCGTTGCTGATTACCTGAGTGCGATCCACCGCGAGTCCTCGTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca > 2:8240744/6‑150 (MQ=17) cccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 2:2597472/1‑150 (MQ=255) cccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 2:9036520/1‑150 (MQ=255) ctggCCGGGCTCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGa > 2:4131384/3‑150 (MQ=255) ctggCCGGGCTCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGa > 2:4356435/3‑150 (MQ=255) cGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaa > 1:1176716/1‑150 (MQ=255) cGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGa < 1:2735366/150‑1 (MQ=255) gAGCCCGGCCCGGGTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGAt > 2:294037/1‑150 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg < 2:2696962/150‑1 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg > 2:7558701/1‑150 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg > 1:2014132/1‑150 (MQ=255) cAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc < 2:5543194/150‑1 (MQ=255) ggTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGa < 2:5650989/150‑1 (MQ=255) gttgttGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAg > 1:1804958/1‑150 (MQ=255) gttgttGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAg < 1:9087729/150‑1 (MQ=255) ttgttgCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGc < 2:392040/150‑1 (MQ=255) tgCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGcacca > 1:5719990/1‑150 (MQ=255) tGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGa > 1:7653374/1‑150 (MQ=255) cTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGtt > 2:3695141/1‑146 (MQ=255) cTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACg < 1:7075557/150‑1 (MQ=255) tGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACgg < 1:6233682/150‑1 (MQ=255) aTTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAACCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt < 2:7293076/150‑1 (MQ=255) aTTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt < 2:2308054/150‑1 (MQ=255) aTTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt > 2:1280601/1‑150 (MQ=255) gTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGa < 1:8630018/150‑1 (MQ=255) gTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGa < 2:8998283/150‑1 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 2:3327442/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 1:3828251/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 1:1891984/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 2:6220429/1‑150 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGAc > 2:1748306/1‑133 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGAc < 1:1748131/133‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 2:1714480/150‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 1:8985503/150‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 1:8043040/150‑1 (MQ=255) gcgAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCAc < 1:2986930/150‑1 (MQ=255) cgAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCAcc < 2:2464091/150‑1 (MQ=255) gAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCa < 1:7437701/150‑1 (MQ=255) tCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGa > 1:5547988/1‑150 (MQ=255) tCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGa > 1:4358892/1‑150 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaa > 2:1128752/1‑150 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaa > 2:4030055/1‑150 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaa > 1:6479572/1‑150 (MQ=255) tctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaaa > 2:2820738/1‑150 (MQ=255) tctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTCGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaaa > 2:122533/1‑150 (MQ=255) ctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaaaa > 1:7299533/1‑150 (MQ=255) gATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACga < 1:3909676/150‑1 (MQ=255) gATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACga < 2:3148019/150‑1 (MQ=255) tGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACgaga < 1:7555103/150‑1 (MQ=255) tGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACgaga < 2:1913188/150‑1 (MQ=255) gCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGAc > 1:8913641/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa > 2:5092498/1‑125 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 1:5092498/125‑1 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:35406/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 1:5929648/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 1:6840294/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:4958249/1‑150 (MQ=255) aaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTc > 1:3690104/1‑150 (MQ=255) aaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTc > 2:1470781/1‑150 (MQ=255) aaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTcc > 1:2209698/1‑150 (MQ=255) aaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTcc > 1:2706774/1‑150 (MQ=255) aCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTccc < 1:8659550/150‑1 (MQ=255) aCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTccc < 2:6436722/150‑1 (MQ=255) tttGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGc > 2:8847848/1‑150 (MQ=255) gACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCa > 1:3727074/1‑150 (MQ=255) aCGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 1:4006342/1‑150 (MQ=255) cGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAAt < 1:3098342/150‑1 (MQ=255) gCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATc > 1:8289433/1‑150 (MQ=255) cccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCg > 1:1631519/1‑150 (MQ=255) ccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCGCACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGc < 2:116784/150‑1 (MQ=255) aGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCct < 1:6454311/150‑1 (MQ=255) gggggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCctc < 1:246932/150‑1 (MQ=255) gggggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCctc < 2:853259/150‑1 (MQ=255) ggggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCctct < 2:6217641/150‑1 (MQ=255) gggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTa < 1:1007919/150‑1 (MQ=255) gggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTGTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCtata < 2:6290361/150‑1 (MQ=255) | AACATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTAC > NC_002947/4938447‑4938743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |