| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,938,597 | G→C | 5.4% | intergenic (‑41/‑377) | flhA ← / → PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,938,597 | 0 | G | C | 5.4% | 1116.6 / 37.4 | 332 | intergenic (‑41/‑377) | flhA/PP_4345 | flagellar export pore protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (169/145); new base C (8/10); total (177/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 338 total aligned reads displayed.
CATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTACGGC > NC_002947/4938449‑4938746 | catcatcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGCCGCCCAGGGGgcgc < 1:646330/150‑1 (MQ=21) tcatcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCt > 2:3384840/1‑150 (MQ=34) atcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTgg > 2:1007919/1‑150 (MQ=35) tcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTggg > 1:5424000/1‑150 (MQ=35) tcatTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTggg > 1:3284490/1‑150 (MQ=35) catTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGc < 2:7438160/150‑1 (MQ=37) cgtGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCg < 2:8402347/148‑1 (MQ=255) ttGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGt > 1:8551528/1‑150 (MQ=38) ttGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGt > 1:3918081/1‑150 (MQ=38) gtGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGt < 1:6930823/149‑1 (MQ=38) ccAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCGtcaa < 1:8948304/150‑4 (MQ=255) cAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCt > 1:2321684/1‑150 (MQ=255) cAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGCGCCCCCTGGGCGtcaaa < 1:8360109/150‑5 (MQ=255) aaCATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGGTGGTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCtt > 2:6589136/1‑150 (MQ=255) cagcagCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCaagaa > 2:3098347/1‑150 (MQ=255) cagcaACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCt > 2:5135042/1‑150 (MQ=255) agcaACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCtt < 2:1416673/150‑1 (MQ=255) caACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTc < 1:7576991/150‑1 (MQ=255) aGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAAc < 2:6205472/150‑1 (MQ=255) ggCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACttt < 2:8024890/150‑1 (MQ=255) cACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTgg < 1:5577957/150‑1 (MQ=255) aCCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGc < 1:6419103/150‑1 (MQ=255) cccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAACCATGGACGCCCAGGGGGCGCCTGGGCGTGGCATTGCAAGAAGCTTTCCAACTTTGGCa < 2:6902370/150‑1 (MQ=255) cccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCa < 1:8148074/150‑1 (MQ=255) cccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCa < 1:6786739/150‑1 (MQ=255) ccccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAg > 1:7386236/1‑150 (MQ=255) ccAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGac > 1:3417321/1‑150 (MQ=255) aGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGacac > 2:5398318/1‑150 (MQ=255) gCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca < 2:2386735/150‑1 (MQ=255) gCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca < 2:4040897/150‑1 (MQ=255) aacctggCCGGGCTCGGCCGGGGTGTTGCGGGCGTTGCTGATTACCTGAGTGCGATCCACCGCGAGTCCTCGTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCcaca > 2:8240744/6‑150 (MQ=17) cctggCCGGGCTCGGCCGGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 2:1215066/4‑150 (MQ=255) cccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 2:2597453/1‑150 (MQ=255) cccGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACg > 2:9036520/1‑150 (MQ=255) ctggCCGGGCTCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGa > 2:4356435/3‑150 (MQ=255) ctggCCGGGCTCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGa > 2:4131384/3‑150 (MQ=255) cGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGaa > 1:1176716/1‑150 (MQ=255) gAGCCCGGCCCGGGTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGAt > 2:294037/1‑150 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg > 1:2014132/1‑150 (MQ=255) ggCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCg < 2:2696962/150‑1 (MQ=255) cAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGc < 2:5543194/150‑1 (MQ=255) gttgttGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAg > 1:1804958/1‑150 (MQ=255) gttgttGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAg < 1:9087726/150‑1 (MQ=255) ttgttgCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGc < 2:392040/150‑1 (MQ=255) tgCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGcacca < 1:7335803/150‑1 (MQ=255) ggCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACcgc < 1:704412/150‑1 (MQ=255) gTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGtt < 1:5386149/150‑1 (MQ=255) cTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGtt > 2:3695141/1‑146 (MQ=255) cTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGtt < 1:3695141/146‑1 (MQ=255) tGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACgg > 2:5776263/1‑150 (MQ=255) aTTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAACCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGt < 2:7293076/150‑1 (MQ=255) aaCTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGc > 1:5242720/1‑150 (MQ=255) tGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCa > 1:8651515/1‑150 (MQ=255) gTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGa < 1:5959733/150‑1 (MQ=255) gTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGa < 2:8998283/150‑1 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 2:6220429/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 1:1891984/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 2:3327442/1‑150 (MQ=255) tGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGag > 1:3828251/1‑150 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGAc < 1:1748131/133‑1 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGAc > 2:1748131/1‑133 (MQ=255) gATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa > 2:1161118/1‑150 (MQ=255) cACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAgcaagcaa > 1:8381797/1‑150 (MQ=255) aCCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAAt > 1:7492761/1‑150 (MQ=255) gcgAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCAc < 1:2986930/150‑1 (MQ=255) cgAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCAcc < 2:2464091/150‑1 (MQ=255) tCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGa > 1:4358892/1‑150 (MQ=255) ctctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaa > 2:568395/1‑150 (MQ=255) tctTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGaaaa > 2:2820738/1‑150 (MQ=255) ttGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAAc > 2:187621/1‑150 (MQ=255) ttGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAAc > 2:2195106/1‑150 (MQ=255) ttGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAAc < 1:786952/150‑1 (MQ=255) gaagCAAAACTTTGACGCCCAGGGCGCGCCTGGGCGTGGCTTTGCAAGAACCTTTCCCACTTTCGCAGACACCCACACGAAAACATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCAAGAGCAAGCAATCACCAAGAAAAACga < 2:7497858/147‑1 (MQ=39) gATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACga < 2:3148019/150‑1 (MQ=255) gCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGAc > 1:2860129/1‑150 (MQ=255) gCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGAc > 1:8824534/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGagcaa < 1:5092498/125‑1 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:1272848/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:4958249/1‑150 (MQ=255) aaaaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCt > 2:35406/1‑150 (MQ=255) aaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTcc > 1:2706774/1‑150 (MQ=255) aaCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTcc > 1:2209698/1‑150 (MQ=255) aCTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTccc < 2:6436722/150‑1 (MQ=255) tttGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGc > 2:8847848/1‑150 (MQ=255) gACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCa > 1:3727401/1‑150 (MQ=255) aCGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 1:4006342/1‑150 (MQ=255) aCGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 2:6275609/1‑150 (MQ=255) aCGCCCAGGCGCCCCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCaa > 2:4557113/1‑150 (MQ=255) cGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAAt < 1:3098342/150‑1 (MQ=255) cccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATc < 1:6242558/149‑1 (MQ=255) cccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCg > 1:4875634/1‑150 (MQ=255) cccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCg > 1:1631519/1‑150 (MQ=255) ccAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGc > 1:7283556/1‑150 (MQ=255) gggggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCctc < 1:246932/150‑1 (MQ=255) gggggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCctc < 2:853259/150‑1 (MQ=255) gggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCtata < 2:1690418/150‑1 (MQ=255) gggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTa < 1:1007919/150‑1 (MQ=255) ggCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTAc > 1:5511823/1‑150 (MQ=255) gcCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGa > 1:5688983/1‑99 (MQ=255) gcCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTACGGc > 1:5758807/1‑150 (MQ=255) | CATCATCATTGCCAACATCACCAGCAGCAACAGCGGCACCCCCAGGTTGCCCCGGCCGAGCCCGGCCAGGTTGTTGCGGGCGTTGCTGATTAACTGAGTGCGATCCACCGCGAGTCCTCTTGATGCAAAACTTTGACGCCCAGGGGGCGCCTGGGCGTGGCTTTGCAAGAAGCTTTCCAACTTTGGCAGACACCCACACGAAAAGATGAACCGGGCGAGCACCACCGCGTTGACGGGTGGCTCATGAGCAAGCAATCACCAAGAAAAACGAGACCTCCCGCCCAATCGCCTCTACGGC > NC_002947/4938449‑4938746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |