| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,101,957 | A→C | 6.7% | intergenic (+73/+80) | PP_4488 → / ← phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,101,957 | 0 | A | C | 6.7% | 495.8 / 4.6 | 174 | intergenic (+73/+80) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (65/91); new base C (12/3); total (77/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.70e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGT > NC_002947/5101809‑5102106 | gACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCag < 1:2550342/150‑1 (MQ=255) aCCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga < 2:5813652/150‑1 (MQ=255) aCCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga < 1:2896718/150‑1 (MQ=255) ccTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCagag < 1:663543/150‑1 (MQ=255) gAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAAGCGCGCAGCCAGAGCACAg > 2:1121090/1‑150 (MQ=255) aGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGc < 1:8032122/150‑1 (MQ=255) gACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCGATCGCGACACAAGGCCGCTACCACACATAATTCGCTCAGCCCGAGCACAGCGt > 2:1130739/1‑150 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc < 1:5013117/150‑1 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCCGGCCCCAAAACCCAAAAAAAGCCCCACCCACACAAAATACCCACACCCACAGCACAACGTaaaac > 1:4469164/1‑146 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:4104535/150‑1 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:6152939/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:3712365/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 1:6558101/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:3598138/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:408284/150‑1 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCACCCACAGATAATGCGCTCAGCCCCCGCACAGCGTATTACCAGTgg > 2:5032951/1‑150 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCACCCACAGATAAAGCGCTAAGCCAGAGCACACCGTATTACCGGTgg > 2:1854688/1‑150 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAg < 2:4631605/150‑1 (MQ=255) taGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 1:9139455/149‑1 (MQ=255) aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 2:1430806/150‑1 (MQ=255) aGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCg < 1:1359422/150‑1 (MQ=255) gCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCAGCGGGCCCCGATCGCGACCCAACGCCCCGGCCACCGCTAATGCGCCCACCCCCAGCACCGCCGATTAGCGGGGGGGGCgg > 1:4248873/1‑150 (MQ=255) caTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGCATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCCGAGCACAGCGTATTACCTGTGGGCGCGGccg > 2:3527658/1‑149 (MQ=255) aTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCtt < 1:9140698/150‑1 (MQ=255) ttCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCCCTCCCACAGAAAAAGAGCTCAGCCAGAGCACACCGTATTAACTGTGGGAGCGGCCAtg > 2:7191111/1‑150 (MQ=255) tctcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCAGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtgt > 2:7051089/1‑150 (MQ=255) tcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTgtgt < 2:7864127/150‑1 (MQ=255) ccGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGaaa < 2:6545354/150‑1 (MQ=255) cgcgTGTTGGGTATCGGCTGCTCCAACGGCTGATACGTTGGATTCGGGGGCCCTGCGGGCCCCTATCGCGACACACTGCCGATCCCACAGATATTGCGCTCAGCCTGAGCACAGAGTTTTACCTGTGGGATGGGCCTTTTGTCGCGAAAg < 2:5589643/150‑1 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAg < 2:8233803/150‑1 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAg < 2:2103824/150‑1 (MQ=255) cgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGa < 2:756717/150‑1 (MQ=255) aaCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCa < 2:3751109/150‑1 (MQ=255) ccccgattCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCGATCGCGGCACAAGGCCGCGCCCCCAGAAAATGCGCGCAGCCAGCGCACACCGGATTAACGGTGGGGGCGGGCGTGTGGGGCGGAAGGACGGCCACGCCGt > 2:1745261/8‑150 (MQ=255) ctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGCCCCTATACCGACACAAGGCCGCGCCCACAGATAATTCGCGCACCCCGAGCCCCCCCTATTACCGGTGGGAGCGGCCGGGTGTCGCGGAACGACTGCAACGCACTccc > 2:6145881/1‑150 (MQ=255) ctCCACCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCGTTGCAGTcctttc < 2:2230014/150‑5 (MQ=38) ctCCAACGGCTGATACCTGGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACCCCCGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTCCCTGGGGGAGCGGCCTTGTGTCGCGAAAGGACTGCGTTGCAGTcctttc < 2:1959044/150‑5 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGcaca > 2:7448171/1‑92 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCGGTTGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGt > 2:2874696/1‑150 (MQ=255) ccAACGGCTGATACCTTGGAATCGGGGGGCCGGCGGGCCCCGAACGCGACCCCAGGCCGCGCCCCCACAAAAATCGCGCACCCCCCGCACAGCGGAGTAACGGGGGGGGCGGCCGTGGGTGGCGGAAGGGCGGCAAAGCAGACCCACGtt > 2:4254003/1‑150 (MQ=255) ccAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCGATCGCGCCACAAGGCCGCTCCCACACATAATTCGCTCAGCCCGAGCACAGCCTATTAACGGTGGGGGGGGGCGTGTGTGGCGCAAGGACGGCCACCCCGTCCCACGtt > 2:4254277/1‑150 (MQ=255) cAACGGCTGATACCTGGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAAGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCCGTCCCAGGtgc > 2:7456354/1‑148 (MQ=255) aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt < 2:7517913/150‑1 (MQ=255) aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATAGCGACACAACGCCGCTCCCACAGATAAAGCGCGCAGCCAGAGCACAGCGGAATACCAGTGGGAGCGGCCTTGTGTCGCGAAAGGACGGCAACCCCGACCCAGGTTcg > 2:8572802/1‑149 (MQ=255) aTACCTTGGAATCGGGGGCCCGGCGGGCCCCAATCGCGACACAAGGCCCCGCCCACACAAAAATCGCGCACCCAGAGCACACCGGATTAACAGTGGGAGCGGCCGTGTGTCGCGAAAAGACAGCAACCCACTCCCAGGGTCTTTGAAcaa > 2:1671055/1‑150 (MQ=255) tACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaac < 2:2754379/150‑1 (MQ=255) ttGGAATCGGGGGCCCGGCGGGCCCCTAACGCGACACAAGGCCGCTCCCACAGATAATGCGCGCAGCCAGAGCCCAGCGTATTACCGGTGGGAGCGGCCGGGTGTCGCGAAAGGACTGCAACGCAGTCCCACGTTCTTTGACCaacaaca > 2:4557179/1‑149 (MQ=255) aaTCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCAAAGAAAAATCGCTCAGCCAGAGCACAGCGTATTAACTGTTGGAGCGGCCTTGTGTAGCGAAAGGACAGCAACGCAGTCCCAGGTTCTTTGACCAAAAACaaaac > 2:5489043/1‑148 (MQ=255) gggggCCCGGCGGGCCCCTAGCGCGACACACGGCCGCTCCCACAGATAATGCGCTCAGCCCGAGCACCGCTTATTACGTGTGGGCGGGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATccgcc < 1:1738133/150‑1 (MQ=255) ggCCCTGCGGGCCCCTATCGCGACACAAGGCCCCGCCCCCACATAATGCGCGCAGCCAGAGCACAGCCTATTACCGGTGGGAGCGGCCGTGTGTCGCGGAAGGACGGCAACGCAGTCCCAGGGTCTTTGTCCAAAAACTAATccgccgcc > 1:2785971/1‑148 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCGTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATACGCCGACTTg > 2:441187/1‑150 (MQ=255) cTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGt < 2:9095126/150‑1 (MQ=255) ggCGGGCCCCTTTCGCGACACAAGGCCGCTCCCACAGATACTGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGtt < 2:6055068/149‑1 (MQ=255) ggCCCCTTTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 2:8606043/150‑1 (MQ=255) ggCCCCTATCGCGACACAAGGGCGCTCCCACAGATACGGCGCTCAGCCAGTGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGCAAGGACTGCAACGCAGTCCCTGGTTCTTTGACCATCAACGAATCCGCCGACATGTTAAGc < 2:746458/150‑1 (MQ=38) ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 1:5264939/150‑1 (MQ=255) ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 2:5055937/150‑1 (MQ=255) ggCCCCTATCGCGACACAAGGCCGCACCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCAGTGGGAGCGGCCGTGTGTCGCGAAATGAATGCAACGCAGTCCCAGGTTCTTTTACCAACAACTAAACCGCCGACATGTTAAGc > 1:2088447/1‑150 (MQ=255) gCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAATCCCTCAGCCAGAGCACAGCGTATTAACTGTGGGAGCGGCCATGTGTCGCGAAAGGACAGCAACCCAGTCCCAGGTTCTTTGTCCAACAACTAATACGCCGACTTGATAAGCg > 1:6705441/1‑150 (MQ=38) ccccTATCGCGCCACAAGGCCGCTCCCACCGATAATGCGCTCCGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTGGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACACCTAATCCGCCGACTTGTTAAGCGa < 2:7744778/150‑1 (MQ=255) ccccTATCGCGACACACGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 2:5641328/150‑1 (MQ=255) ccccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCATAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 1:8253399/150‑1 (MQ=255) ccccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 2:7313201/150‑1 (MQ=255) ccccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 2:5072049/150‑1 (MQ=255) ccccTATCGCGAACCAAGGCGGCTACCACTGATACTGCGGTCAGCCAGAGCAGAGCGTATTACCTGTGGGAGCGGCGTTGTGTAGCGACAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 2:521850/150‑1 (MQ=255) ccccTATCGCCCCACACGGCCGCTCCCACAGTTACTGCGCTCCGCCAGAGCACCGCTTATTACGTGTGGGCGCGGCCTTGTGCCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 1:1671055/150‑1 (MQ=255) cccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAg > 2:8273374/1‑150 (MQ=255) tCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 1:8320950/144‑1 (MQ=255) tCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa > 2:8320950/1‑144 (MQ=255) cgcgACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATcc < 2:8123542/150‑1 (MQ=255) ccacacAACCCCGCTCCCACACATAATGCCCACACCCACACCACACCGAATTACCTGTGGGAGCGGCCTTGTGACGCGAAAGGACACCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCt < 2:3824618/148‑1 (MQ=255) cacaAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCaa > 2:7952199/1‑150 (MQ=255) aaGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCt < 2:1105438/50‑1 (MQ=255) aaGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCt > 1:1105438/1‑50 (MQ=255) ggCCCCCCCCACATCTAAGGCGCTCAGCCAGCGCAAAGCGTATTACCTGTGGGCGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgt < 1:1812488/150‑1 (MQ=255) gCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTAGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt < 2:5559519/150‑1 (MQ=255) ccGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg < 1:8885750/150‑1 (MQ=255) cGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCTTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTgg < 1:5477983/150‑1 (MQ=255) cacaGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTg > 2:8030035/1‑150 (MQ=255) acaGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGt > 2:3216591/1‑150 (MQ=255) acaGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGt > 2:899482/1‑150 (MQ=255) acaGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGt > 1:8345159/1‑150 (MQ=255) gacaaTGCGCTCAGCCAGAGCACAGCGTTATACCTCGGGGAGCTGCCATGTGACGCGAAAGGACTGCAACGCTGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTTAGCGAGTAATCCCTCAACTTGTGGGCAATTGTCgt < 2:2780453/147‑1 (MQ=255) gATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgt > 1:1017409/1‑150 (MQ=255) gATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgt < 2:6351914/150‑1 (MQ=255) gATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgt < 1:7535038/150‑1 (MQ=255) tGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCg > 1:5851044/1‑150 (MQ=255) gcTCAGCCAGAGCACAGCGTTTTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGaaa < 1:3502399/150‑1 (MQ=255) gcTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCGACTTGTTGGCAATTGTCGTGTGCGaaa > 1:6968083/1‑150 (MQ=255) gcTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGaaa < 2:8126286/150‑1 (MQ=255) tCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAaca > 2:241882/1‑150 (MQ=255) tCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAaca > 2:2112403/1‑150 (MQ=255) cgCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACAcc < 1:7294916/149‑1 (MQ=255) aGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACAcc > 1:1487672/1‑150 (MQ=255) aGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACAcc > 1:1868567/1‑150 (MQ=255) gCCAGAGCACAGCGTATTACCTGTGGGTGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACAccc < 1:7045561/150‑1 (MQ=255) ccAGAGCACAGCTTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCa < 1:4057895/150‑1 (MQ=255) ccAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCa < 2:3700995/150‑1 (MQ=255) agagCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGt > 1:3671314/1‑150 (MQ=255) agagCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGt > 1:2605039/1‑150 (MQ=255) | GACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGT > NC_002947/5101809‑5102106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |