| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,110,875 | C→T | 5.9% | H214H (CAC→CAT) | PP_4494 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,110,875 | 0 | C | T | 5.9% | 1064.9 / 36.0 | 338 | H214H (CAC→CAT) | PP_4494 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (144/173); new base T (8/12); total (153/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.74e-01 | |||||||||||
Only 100 of 342 total aligned reads displayed.
GCCGAGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGC > NC_002947/5110726‑5111024 | gaggagCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCgg < 1:8160596/150‑1 (MQ=255) gCTGGTGGTGATCTTGTCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt > 2:9086320/1‑150 (MQ=255) tggtggTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGc < 1:6189933/150‑1 (MQ=255) tggtggTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGc < 2:5038643/150‑1 (MQ=255) gtggtgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCgg > 2:3272866/1‑150 (MQ=255) gtgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTg < 1:6969591/150‑1 (MQ=255) tgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgg < 1:8672736/150‑1 (MQ=255) ttGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCg > 1:8892197/1‑150 (MQ=255) tGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGa < 2:788633/150‑1 (MQ=255) gccgccGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAg < 1:5461103/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 2:5924140/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:1869868/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:540534/150‑1 (MQ=255) cTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGa < 1:3753683/150‑1 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGTGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 2:1679923/1‑150 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 2:1249638/1‑150 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 2:8770897/1‑150 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 1:5202807/1‑150 (MQ=255) gCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCt > 2:5781296/1‑150 (MQ=255) cGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTc < 1:836692/150‑1 (MQ=255) tCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGc < 1:6325422/150‑1 (MQ=255) cGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCa < 1:415292/150‑1 (MQ=255) gCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCAcc < 1:1666853/150‑1 (MQ=255) aaGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGGTcc < 2:2268904/150‑1 (MQ=255) gCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAgg < 2:3073051/150‑1 (MQ=255) gCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAgg < 2:4793891/150‑1 (MQ=255) cTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGc < 1:6393079/150‑1 (MQ=255) cTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGc < 2:5189866/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg < 1:5545665/150‑1 (MQ=255) gAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGt > 2:1899881/1‑150 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTa < 2:1458518/150‑1 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTa > 1:4463991/1‑150 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTACCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACATGATCCAGGCGCTa > 2:6537650/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 2:1766941/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTATCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 1:1957946/1‑150 (MQ=255) ggCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGc > 1:3679085/1‑150 (MQ=255) gCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGcc < 1:6783702/150‑1 (MQ=255) cAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgg < 1:2024146/150‑1 (MQ=255) tCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcg < 2:2005456/150‑1 (MQ=255) agagGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGgatcgggatcgg < 1:6863111/150‑1 (MQ=255) gctgctGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGt > 2:1350634/1‑150 (MQ=255) ctgctgATTGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCGGCACCGGGCGTTGCGGCTGTGGGCGATCTTCGTTCTGACCTCGCACCTGATCCAGGAGGTACTTGCCGGGATCGGTATCGGGCTGGTg < 2:4014329/150‑1 (MQ=255) gctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGcc > 2:2571888/1‑150 (MQ=255) ctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCcg > 2:4527896/1‑150 (MQ=255) gAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCcgcg > 1:8768549/1‑150 (MQ=255) aTGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCa < 1:7089834/150‑1 (MQ=255) tgtaGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCat > 2:2184203/1‑150 (MQ=255) tgtaGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCag > 2:6808990/1‑149 (MQ=255) tgGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCatat < 1:1304546/150‑1 (MQ=255) gCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtg > 1:7781540/1‑150 (MQ=255) ccAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtgg > 1:674340/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCATCGCCCGGTGCGGcag < 1:3191105/67‑3 (MQ=37) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:2512906/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:8616016/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:8242131/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt < 1:930882/150‑1 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 2:5532799/1‑150 (MQ=255) caacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTgga < 1:4513863/150‑1 (MQ=255) caacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTgga < 2:6721393/150‑1 (MQ=255) aacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCAGAGTGGTggag > 2:4663999/1‑150 (MQ=255) cccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTggagga < 2:7172700/150‑1 (MQ=255) cccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTggagga < 1:3272866/150‑1 (MQ=255) cGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGGGCCGCGCGTGTGGGTggtggagg > 2:3155425/1‑150 (MQ=255) gCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTggaggaggagga > 1:355437/1‑150 (MQ=255) aTGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAAc < 1:6036482/150‑1 (MQ=255) gCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCTCCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAGCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTg < 2:7319199/150‑1 (MQ=255) cGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTgg < 2:5480594/150‑1 (MQ=255) gggCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAAGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCaa > 1:4788512/1‑150 (MQ=255) ggCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAg < 2:6220941/150‑1 (MQ=255) gCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGTATATTGGTGGAGGAGGAACTGGCCAAgg > 1:904122/1‑150 (MQ=255) gCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAgg < 2:6019037/150‑1 (MQ=255) gAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGga < 2:4134334/150‑1 (MQ=255) gTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGgaga < 2:4231118/150‑1 (MQ=255) gTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGgaga < 2:5837946/150‑1 (MQ=255) gTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCt > 1:1922259/1‑150 (MQ=255) gTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCt > 2:7649888/1‑150 (MQ=255) gTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCt < 1:5863840/150‑1 (MQ=255) ccATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg > 2:8111066/1‑150 (MQ=255) ccATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg < 1:4109874/150‑1 (MQ=255) catcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 1:1051395/1‑117 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGACCTGGCCAAGGGAGAGCTGTACAGcc > 1:6607962/1‑150 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGcc > 2:1877487/1‑150 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGcc > 2:6903196/1‑150 (MQ=255) gatctccTGCCGCCCCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGCACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCg < 1:8469913/145‑1 (MQ=255) catGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCg > 1:8111314/1‑150 (MQ=255) tGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCggg > 2:7259100/1‑150 (MQ=255) cccagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCggggg > 1:7463848/5‑150 (MQ=255) ccagCCGCATCGCCCGGTGCGGCAGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGt > 2:2466380/4‑150 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag > 1:7628835/3‑132 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag < 2:8277650/130‑1 (MQ=255) cTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTg < 2:2892495/150‑1 (MQ=255) cTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGCACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCCTATGGGGGGAGGAGGACCTGGCCACGGGAGAGCTGTACAGCCCggagatc > 2:8469913/1‑145 (MQ=255) tGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTgg > 2:7477897/1‑150 (MQ=255) tGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTgg > 1:2261272/1‑150 (MQ=255) gCCGCAGCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCAGATTGGTGGAGGAGGTACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGc > 2:2734105/1‑150 (MQ=255) gCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGc < 1:6435508/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 2:3689708/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 2:358273/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 1:2924801/150‑1 (MQ=255) ccGGGCGAAGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGACAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgc < 2:8892197/150‑1 (MQ=255) | GCCGAGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGC > NC_002947/5110726‑5111024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |