| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,110,878 | G→C | 6.2% | R215R (CGG→CGC) | PP_4494 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,110,878 | 0 | G | C | 6.2% | 1128.6 / 46.4 | 336 | R215R (CGG→CGC) | PP_4494 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (144/171); new base C (9/12); total (153/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 352 total aligned reads displayed.
GAGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGCCAG > NC_002947/5110729‑5111027 | gCTGGTGGTGATCTTGTCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt > 2:9086320/1‑150 (MQ=255) gCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt < 1:8494706/150‑1 (MQ=255) tggtggTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGc < 2:5038643/150‑1 (MQ=255) ggtgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGTGGCt < 1:7956512/150‑1 (MQ=255) tgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCAGCCGCATCGCCCGGTGCGGCAgg < 1:7755687/150‑1 (MQ=255) tgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCAGCCGCATCGCCCGGTGCGGCAgg < 2:7200692/150‑1 (MQ=255) aTCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgggg > 2:8745251/1‑150 (MQ=255) aTCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgggg > 2:5875480/1‑150 (MQ=255) tGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGa < 2:5192618/150‑1 (MQ=255) gccgccGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAg < 1:5461103/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:1869868/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:6635128/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:540534/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 2:5924140/150‑1 (MQ=255) gAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAg < 1:6748359/150‑1 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGTGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 2:1680050/1‑150 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 1:5202807/1‑150 (MQ=255) gCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCt > 2:1421207/1‑150 (MQ=255) gCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCt > 2:5781296/1‑150 (MQ=255) gTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTGTGCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTggtacag < 2:4977981/150‑7 (MQ=255) gCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCAcc > 2:6222126/1‑150 (MQ=255) aaGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGGTcc < 2:2268904/150‑1 (MQ=255) aaGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATcc > 1:6413007/1‑150 (MQ=255) gCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAgg < 2:3073875/150‑1 (MQ=255) tGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCg < 2:3350008/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg < 1:9117223/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg < 1:5545665/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg > 1:1780017/1‑150 (MQ=255) gAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGt > 2:1899881/1‑150 (MQ=255) gAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGt < 2:5631394/150‑1 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTa > 1:4463991/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 2:726050/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTATCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 1:1957946/1‑150 (MQ=255) ggCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGc > 1:3679085/1‑150 (MQ=255) gATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggat > 2:6743244/1‑150 (MQ=255) aTCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatc < 2:747670/150‑1 (MQ=255) tCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcg < 2:2005456/150‑1 (MQ=255) gCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcggga < 2:8279038/150‑1 (MQ=255) gCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcggga > 2:8869094/1‑150 (MQ=255) gAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCgggatcgggatc > 1:8154250/1‑150 (MQ=255) agagGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGgatcgggatcgg < 1:8849262/150‑1 (MQ=255) gagGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGatcgggatcggg < 2:1622823/150‑1 (MQ=255) agGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGc < 1:3758714/150‑1 (MQ=255) gTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTg > 2:7011852/1‑150 (MQ=255) ctgctgATTGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCGGCACCGGGCGTTGCGGCTGTGGGCGATCTTCGTTCTGACCTCGCACCTGATCCAGGAGGTACTTGCCGGGATCGGTATCGGGCTGGTg < 2:4014329/150‑1 (MQ=255) ctgctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTATGTGCCGGGATCGGGATCGGGCTGGTg < 1:4200042/150‑1 (MQ=255) gctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGcc > 2:2571888/1‑150 (MQ=255) ctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCcg > 2:4527896/1‑150 (MQ=255) gAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCcgcg > 1:8768419/1‑150 (MQ=255) aaTGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCgcgc > 1:6935739/1‑150 (MQ=255) tgtaGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCat > 2:2184203/1‑150 (MQ=255) tgGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCatat < 1:1304546/150‑1 (MQ=255) tgGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCatat > 1:1924574/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCATCGCCCGGTGCGGcag < 1:3191105/67‑3 (MQ=37) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:7085782/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt < 2:7858384/150‑1 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:2512906/1‑150 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 2:1072930/1‑150 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 2:6073087/1‑150 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg < 1:2028872/150‑1 (MQ=255) acaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtgg < 2:6561313/150‑1 (MQ=255) cccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTggagga < 1:3272866/150‑1 (MQ=255) ccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc < 1:6801351/80‑1 (MQ=255) ccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTggaggag < 1:6468311/150‑1 (MQ=255) cGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGGGCCGCGCGTGTGGGTggtggagg > 2:3155425/1‑150 (MQ=255) gCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTggaggaggagga > 1:355437/1‑150 (MQ=255) gCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTg < 1:4587535/150‑1 (MQ=255) gCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTg < 1:6144620/150‑1 (MQ=255) cGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTgg < 2:5480594/150‑1 (MQ=255) cGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTgg < 1:6327878/150‑1 (MQ=255) cGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTgg < 1:8369942/150‑1 (MQ=255) gggCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAAGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCaa > 1:4788512/1‑150 (MQ=255) gCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAgg < 2:4688454/150‑1 (MQ=255) cGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAggg < 2:133594/150‑1 (MQ=255) gAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGga < 2:4134334/150‑1 (MQ=255) gTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGgaga < 2:4231118/150‑1 (MQ=255) gTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCt < 1:5863840/150‑1 (MQ=255) ttCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTa < 1:7433418/150‑1 (MQ=255) ccATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg < 1:4109874/150‑1 (MQ=255) acatcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg > 1:747030/2‑150 (MQ=255) catcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 1:1051395/1‑117 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGcc > 1:9035831/1‑150 (MQ=255) catGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCg < 2:8071892/150‑1 (MQ=255) atGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgg < 1:6222126/150‑1 (MQ=255) ggCCTTCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgggg < 1:8667117/150‑1 (MQ=255) ggCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgtgg < 2:6811837/150‑1 (MQ=255) ggCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgggg < 2:1812140/150‑1 (MQ=255) ccagCCGCATCGCCCGGTGCGGCAGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGt > 2:2466380/4‑150 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag > 1:8277650/3‑132 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag < 2:7628835/130‑1 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag < 2:8277066/130‑1 (MQ=255) cTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTg < 2:2892495/150‑1 (MQ=255) cTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTg > 1:8204368/1‑150 (MQ=255) tGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTgg > 1:2261272/1‑150 (MQ=255) gCCGCAGCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCAGATTGGTGGAGGAGGTACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGc > 2:2734105/1‑150 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 1:2924801/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 2:3689708/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 2:358273/150‑1 (MQ=255) gggCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgcca < 2:1857119/150‑1 (MQ=255) gggCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgcca < 2:4512250/150‑1 (MQ=255) | GAGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGCCAG > NC_002947/5110729‑5111027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |