| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,110,879 | G→C | 6.2% | A216P (GCG→CCG) | PP_4494 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,110,879 | 0 | G | C | 6.2% | 1129.7 / 46.6 | 336 | A216P (GCG→CCG) | PP_4494 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (144/171); new base C (9/12); total (153/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
Only 100 of 351 total aligned reads displayed.
AGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGCCAG > NC_002947/5110730‑5111027 | gCTGGTGGTGATCTTGTCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt > 2:9086320/1‑150 (MQ=255) gCTGGTGGTGATCTTGTCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt > 2:2087203/1‑150 (MQ=255) gCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAt < 1:8494706/150‑1 (MQ=255) tggtggTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGc < 2:5038643/150‑1 (MQ=255) ggtgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGTGGCt < 1:7956512/150‑1 (MQ=255) gtgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCATCGCCCGGTGCGGcag < 2:1687412/150‑3 (MQ=255) tgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgg < 1:8672736/150‑1 (MQ=255) tgATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCAGCCGCATCGCCCGGTGCGGCAgg < 2:7200692/150‑1 (MQ=255) aTCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgggg > 2:8745251/1‑150 (MQ=255) aTCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTgggg > 2:5875480/1‑150 (MQ=255) ttGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCg > 1:8892197/1‑150 (MQ=255) tGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGa < 2:5192618/150‑1 (MQ=255) gccgccGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAg < 1:5461103/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:6635128/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:1869868/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 2:5924140/150‑1 (MQ=255) ccgGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTc < 1:540534/150‑1 (MQ=255) tGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc > 1:5202807/1‑150 (MQ=255) gCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCt > 2:5781296/1‑150 (MQ=255) gTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTGTGCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTggtacag < 2:4977981/150‑7 (MQ=255) tCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGc < 1:6325422/150‑1 (MQ=255) ggCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCAc > 2:4542393/1‑150 (MQ=255) ggCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCAc < 1:8239375/150‑1 (MQ=255) gCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCAcc > 2:6222126/1‑150 (MQ=255) aaGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATcc > 1:6413007/1‑150 (MQ=255) aGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCa < 2:2901471/150‑1 (MQ=255) gCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAgg < 2:3073875/150‑1 (MQ=255) tGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCg < 2:3350008/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg < 1:5545665/150‑1 (MQ=255) ggAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCgg > 1:1780017/1‑150 (MQ=255) gAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGt < 2:5631394/150‑1 (MQ=255) gAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGt > 2:1899881/1‑150 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTa < 2:1458518/150‑1 (MQ=255) aGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTa > 1:4463991/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 2:726050/1‑150 (MQ=255) cccGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTATCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACg > 1:1957946/1‑150 (MQ=255) ggCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGc > 1:3679085/1‑150 (MQ=255) gATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggat > 2:6743244/1‑150 (MQ=255) aTCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatc < 2:747670/150‑1 (MQ=255) cAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCAGGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcgg < 1:8117588/150‑1 (MQ=255) gCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcggga > 2:8869094/1‑150 (MQ=255) gCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcggga < 2:8279038/150‑1 (MQ=255) cGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCcgggatcgggat > 2:4354738/1‑150 (MQ=255) gagGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGatcgggatcggg < 2:1622823/150‑1 (MQ=255) agGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGc < 1:3758714/150‑1 (MQ=255) gTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTg > 2:7011852/1‑150 (MQ=255) gctgctGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGt < 1:6882552/150‑1 (MQ=255) ctgctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTATGTGCCGGGATCGGGATCGGGCTGGTg < 1:4200042/150‑1 (MQ=255) ctgctgAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTg < 2:4014471/150‑1 (MQ=255) gAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCcgcg > 1:8768419/1‑150 (MQ=255) tgtaGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCat > 2:2184203/1‑150 (MQ=255) tgGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCatat < 1:1304546/150‑1 (MQ=255) tgGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCatat > 1:1924574/1‑150 (MQ=255) ccAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtgg > 1:674340/1‑150 (MQ=255) ccAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtgg < 2:2580138/150‑1 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCATCGCCCGGTGCGGcag > 2:3191105/1‑65 (MQ=37) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCATCGCCCGGTGCGGcag < 1:3191105/67‑3 (MQ=37) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:7085782/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt > 1:2512906/1‑150 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt < 2:7858384/150‑1 (MQ=255) caacaaCCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggt < 1:930796/150‑1 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg < 1:2028872/150‑1 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 2:1072930/1‑150 (MQ=255) aacaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 2:6073087/1‑150 (MQ=255) acaacCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtgg < 2:6561313/150‑1 (MQ=255) cccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTggagga < 1:3272866/150‑1 (MQ=255) ccGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGAc < 1:6801351/80‑1 (MQ=255) gCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTggaggaggagga > 1:355437/1‑150 (MQ=255) aTGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAAc < 1:6036482/150‑1 (MQ=255) gCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTg < 1:4587535/150‑1 (MQ=255) cGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTgg < 2:5480594/150‑1 (MQ=255) gggCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGAAGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCaa > 1:4788512/1‑150 (MQ=255) gCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAgg < 2:4688454/150‑1 (MQ=255) cGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAggg < 2:133594/150‑1 (MQ=255) gAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGga < 2:4134334/150‑1 (MQ=255) gTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGGCCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGgaga > 1:764769/1‑150 (MQ=255) gTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCt < 1:5863840/150‑1 (MQ=255) tCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATAGTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTAc > 2:228444/1‑150 (MQ=255) ccATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg < 1:4109874/150‑1 (MQ=255) acatcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAg > 1:747030/2‑150 (MQ=255) catcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATtggtg > 1:1051395/1‑117 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGcc > 2:1877487/1‑150 (MQ=255) atcatGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGcc > 1:9035831/1‑150 (MQ=255) catGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCg < 2:8071892/150‑1 (MQ=255) atGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgg < 1:6222126/150‑1 (MQ=255) ggCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgtgg < 2:6811837/150‑1 (MQ=255) ggCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCgggg < 2:1812140/150‑1 (MQ=255) ccagCCGCATCGCCCGGTGCGGCAGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGt > 2:2466380/4‑150 (MQ=255) ccTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGt > 1:8436047/1‑150 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag > 1:8277650/3‑132 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag < 2:8277066/130‑1 (MQ=255) cagCCGCATCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGagag < 2:7628835/130‑1 (MQ=255) tGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTgg > 1:2261272/1‑150 (MQ=255) gCCGCAGCGCCCGGTGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCAGATTGGTGGAGGAGGTACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGc > 2:2734105/1‑150 (MQ=255) gCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGc < 1:6435508/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 1:2924801/150‑1 (MQ=255) cACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGttt < 2:3689708/150‑1 (MQ=255) gggCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgcca < 2:3627172/150‑1 (MQ=255) gggCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgcca < 1:7229813/150‑1 (MQ=255) gggCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTgcca < 2:4512250/150‑1 (MQ=255) | AGGAGCTGGTGGTGATCTTGCCGCCGGAGGCTGGCGTCGGCAGCCAAGGCTGGAGCCCGGCCAGGATCAGCGAAGAGGTGCTGCTGAATGTGGCCAACAACCCGCATGCGTGGGGCGAGTGGTTTTCCCATCATGGCCTGCCGCACCGGGCGATGCGGCTGGGGCCGAGCTTCGAGCTGACCTCGCACCTGATCCAGGCGGTACGTGCCGGGATCGGGATCGGGCTGGTGCCGCGCATATTGGTGGAGGAGGAACTGGCCAAGGGAGAGCTGTACAGCCCGGGGGTGGCGTTTGCCAG > NC_002947/5110730‑5111027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |