| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,151,411 | C→G | 7.0% | intergenic (‑427/+21) | PP_mr51 ← / ← PP_4535 | C4 ncRNA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,151,411 | 0 | C | G | 7.0% | 932.1 / 41.9 | 282 | intergenic (‑427/+21) | PP_mr51/PP_4535 | C4 ncRNA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (158/103); new base G (11/9); total (170/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 292 total aligned reads displayed.
TATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTT > NC_002947/5151262‑5151560 | cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCt < 1:6470720/150‑1 (MQ=255) cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCt < 1:7208537/150‑1 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTg < 1:5074873/150‑1 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTg < 2:1411031/150‑1 (MQ=255) gTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGt < 1:2710747/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 2:7635691/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 1:8704657/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 2:5681489/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 1:3670573/150‑1 (MQ=255) cTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTg < 2:7369032/150‑1 (MQ=255) cTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTg < 1:4180958/150‑1 (MQ=255) ttGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTgg > 1:7230303/1‑150 (MQ=255) tGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGa > 1:110695/1‑150 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGaa > 2:7265177/1‑150 (MQ=255) tCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCAGACTACATACTGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACtt < 1:4754733/150‑1 (MQ=255) gCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCa > 2:8191543/1‑150 (MQ=255) gCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCa < 1:2058068/150‑1 (MQ=255) cTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAg < 2:4444031/150‑1 (MQ=255) ttCTGAATGACCACGAGCAATCAGACGCATAATACATACTGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCg < 2:2422673/150‑1 (MQ=255) aaTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGTCTTCAACTTCTGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt < 1:6393910/150‑1 (MQ=255) aaTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt > 2:2552425/1‑150 (MQ=255) tGACCCCGAGCCCTCAGACGCATAAGCCAGAAGGGGTCCACGCCGCCCGCCATATCGTGGCTTCCACTTCCGTGTCCAAGCCAATCCTCCGCCATGTTCCACCCAGGAGGGTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCa < 2:7855476/150‑1 (MQ=255) ccACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTAGGAAATCAGAc > 1:5268264/1‑150 (MQ=255) cGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgc < 2:6584214/150‑1 (MQ=255) cGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgc < 2:8761020/150‑1 (MQ=255) aaTCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGtt > 2:8477605/1‑150 (MQ=255) cAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 2:1997444/150‑1 (MQ=255) cAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 2:342596/150‑1 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGACCTTCAGTTACTCGGCAATCAGACCGCGCGTTCTcc > 2:4710025/1‑150 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTcc > 2:5840541/1‑150 (MQ=255) gCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCg > 2:2110321/1‑150 (MQ=255) cATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGa < 1:7364192/150‑1 (MQ=255) ataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGt < 2:7132659/113‑1 (MQ=255) tAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACg > 1:332846/1‑150 (MQ=255) aTGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGaa < 1:8424653/150‑1 (MQ=255) tgtCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTc > 2:2867727/1‑150 (MQ=255) gtCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTcc < 2:3792045/150‑1 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCg > 2:5735031/1‑150 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCg > 1:29797/1‑150 (MQ=255) aCGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGa > 2:1272481/1‑150 (MQ=255) aCGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGa > 2:1223741/1‑150 (MQ=255) cgccgcCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGaa < 2:6216524/150‑1 (MQ=255) cgccgcCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGaa > 2:274815/1‑150 (MQ=255) ccgccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCACGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATa < 2:3091488/150‑1 (MQ=255) ccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGtt > 2:2985370/1‑150 (MQ=255) atatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGc < 1:1564926/150‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt < 1:3773991/150‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt < 2:6249335/150‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt > 1:5034794/1‑150 (MQ=255) cTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTAT‑CCCCCCTGGTTGGAAAATAAGTTACTCGGCAATAAGAACGCCCCTTCTACCCCCAGCGCCGACGAAGTCCGAGAACAAATACTTTCCCttc > 2:3366600/1‑148 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 2:5262593/1‑150 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 2:2313958/1‑150 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACGTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 2:7728080/1‑150 (MQ=255) gCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAAc < 1:8005104/150‑1 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGt < 1:7486062/64‑1 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGt > 2:7486062/1‑64 (MQ=255) aaCTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAg > 1:1724521/1‑150 (MQ=255) aaCTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAg > 1:8958723/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 1:1024534/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 2:3155213/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 2:8341913/1‑150 (MQ=255) cAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCAt > 2:8674527/1‑150 (MQ=255) cAGTGTCCAAGCCAATCCTCATCAAAGTTCCAACAAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTTCCCTGCAAAGGAAGGCCAt > 1:885536/1‑150 (MQ=255) gtgtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATcc > 2:3999435/1‑150 (MQ=255) tCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgcg > 1:593029/1‑150 (MQ=255) tCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgcg > 2:5415956/1‑150 (MQ=255) cAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTg > 2:4929941/1‑150 (MQ=255) aaGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGa > 1:8342987/1‑150 (MQ=255) tCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa > 2:4301591/1‑150 (MQ=255) tCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa < 1:3955590/150‑1 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACGTCAGGTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGGGATCGCAGAcc > 2:8543863/1‑149 (MQ=255) tCATCCAAGTTCCAACCAGGAGGCTAT‑CCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAAt > 1:4521386/1‑150 (MQ=255) aTCCAAGTTCCAACCAGGAGGCTATCCCCCCCAGGGTTGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCAGACGCGTGATCGCAGACaaag > 2:1591369/1‑148 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 2:3741489/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa < 2:4615245/150‑1 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 1:1504909/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 2:1094345/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 1:5708910/1‑150 (MQ=255) ccAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAt > 2:7492858/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 1:7120912/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 1:1203429/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 1:6171170/1‑150 (MQ=255) aGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTg > 1:54273/1‑150 (MQ=255) ttCCAACCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 2:2469667/1‑150 (MQ=39) cAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 2:1386096/1‑150 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGaa > 1:7732232/1‑81 (MQ=25) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 2:1752064/1‑150 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCATGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa < 1:2489503/140‑1 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:729205/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:4615240/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:4378733/1‑150 (MQ=255) aCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTg > 1:4057075/1‑150 (MQ=255) cAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGAc > 1:5343527/1‑150 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGcc > 1:6876895/1‑150 (MQ=255) aggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGCCCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCg < 1:3819538/150‑1 (MQ=255) cTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGtt < 1:1376690/150‑1 (MQ=255) tATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGttt > 2:6899744/1‑150 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTcc > 1:2224197/1‑150 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTcc > 2:8901342/1‑150 (MQ=255) cccccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCt < 2:6457216/150‑1 (MQ=255) | TATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTT > NC_002947/5151262‑5151560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |