| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,151,414 | C→T | 7.1% | intergenic (‑430/+18) | PP_mr51 ← / ← PP_4535 | C4 ncRNA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,151,414 | 0 | C | T | 7.1% | 862.7 / 36.6 | 282 | intergenic (‑430/+18) | PP_mr51/PP_4535 | C4 ncRNA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (158/103); new base T (11/9); total (170/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 298 total aligned reads displayed.
GCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTTGA > NC_002947/5151265‑5151562 | gcgcgcGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATccccc < 1:7485784/150‑1 (MQ=255) gcgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATccccccc > 2:1233722/1‑150 (MQ=255) cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCt < 1:6470720/150‑1 (MQ=255) cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCt < 1:795740/150‑1 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTg < 2:1411050/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 2:7635691/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGtt > 2:6792643/1‑150 (MQ=255) ttGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTACAGTGTCCAAGCCAATCATCATACAAGTTCCAACCAGGAGGCTATCACCCCCTGGTTgt > 1:7230537/1‑149 (MQ=255) tGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGa > 1:110695/1‑150 (MQ=255) gTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACt < 2:1627636/150‑1 (MQ=255) gCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCa > 2:8191543/1‑150 (MQ=255) cTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAg < 2:4444031/150‑1 (MQ=255) cTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAg < 2:5819340/150‑1 (MQ=255) tgtgCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGt > 1:824478/1‑150 (MQ=255) gtgCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGtt > 2:7181782/1‑150 (MQ=255) tCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCgg > 1:2014839/1‑150 (MQ=255) tGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCa > 2:7325364/1‑150 (MQ=255) tGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCa > 2:5638909/1‑150 (MQ=255) aaTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGTCTTCAACTTCTGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt < 1:6393910/150‑1 (MQ=255) aaTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt > 2:2552425/1‑150 (MQ=255) aTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATc < 2:6946532/150‑1 (MQ=255) tGACCCCGAGCCCTCAGACGCATAAGCCAGAAGGGGTCCACGCCGCCCGCCATATCGTGGCTTCCACTTCCGTGTCCAAGCCAATCCTCCGCCATGTTCCACCCAGGAGGGTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCa < 2:7855476/150‑1 (MQ=255) tGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCa < 1:2128625/150‑1 (MQ=255) cGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgc < 2:8761020/150‑1 (MQ=255) aaTCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGtt > 2:8477605/1‑150 (MQ=255) tCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtct < 2:110695/150‑1 (MQ=255) cAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 2:342596/150‑1 (MQ=255) cAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 2:1997606/150‑1 (MQ=255) cAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTtctc < 2:1794637/150‑1 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGACCTTCAGTTACTCGGCAATCAGACCGCGCGTTCTcc > 2:4710025/1‑150 (MQ=255) cGCATAATACATACTGGGTCCACGCCGCCCGCCATATCTTGGCATCAACTTCAGTGTCCAAGCCAATCCTCATCCACGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGGTACTCGGCAATCAGACCGCGCGTTCTCCAcc < 2:2686465/150‑1 (MQ=255) ataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGt > 1:7132659/1‑113 (MQ=255) cATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGa < 1:9036893/150‑1 (MQ=255) gtCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTcc < 2:3792045/150‑1 (MQ=255) tCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCt > 1:5243378/1‑150 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCg > 2:2440545/1‑150 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCg > 1:3155326/1‑150 (MQ=255) aCGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGa > 1:4075229/1‑150 (MQ=255) cgccgcCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGaa < 2:6216524/150‑1 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAg < 2:2965340/150‑1 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAg < 2:5685195/150‑1 (MQ=255) ccgccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCACGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATa < 2:3091488/150‑1 (MQ=255) atatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGc < 1:1564926/150‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCt < 2:6249335/150‑1 (MQ=255) cTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTAT‑CCCCCCTGGTTGGAAAATAAGTTACTCGGCAATAAGAACGCCCCTTCTACCCCCAGCGCCGACGAAGTCCGAGAACAAATACTTTCCCttc > 2:3366600/1‑148 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 2:5262593/1‑150 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 1:7328770/1‑150 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACGTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 2:7728080/1‑150 (MQ=255) tGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCa > 2:5935435/1‑150 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGt > 2:7486062/1‑64 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACgg > 1:4520665/1‑150 (MQ=255) cTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACAGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGATGCCCTGCAACGGCAGGc > 2:6515864/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 2:3155213/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 2:8341913/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 1:1024534/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACGCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCACCGGCAGGcc > 1:4984811/1‑150 (MQ=255) cAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCAt > 2:8674527/1‑150 (MQ=255) gtgtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATcc > 2:3999435/1‑150 (MQ=255) gtgtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATcc > 1:8884077/1‑150 (MQ=255) tCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgcg > 1:593029/1‑150 (MQ=255) cAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTg > 2:4929941/1‑150 (MQ=255) gCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATc > 1:5050976/1‑150 (MQ=255) cAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGc > 2:2376778/1‑150 (MQ=255) cAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGc > 1:3807646/1‑150 (MQ=255) aTCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgcgc < 1:8404586/75‑1 (MQ=255) aTCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAg > 1:4654429/1‑150 (MQ=255) tCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa > 2:4301591/1‑150 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACGTCAGGTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGGGATCGCAGAcc > 2:8543863/1‑149 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 2:3741489/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 2:641889/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 1:5708910/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 1:4030716/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 1:1504909/1‑150 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa < 2:4615245/150‑1 (MQ=255) ccAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAt > 2:7492858/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 1:6171170/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 1:1203429/1‑150 (MQ=255) aaGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAttt < 1:858469/150‑1 (MQ=255) aggtCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTg < 1:7229475/147‑1 (MQ=255) aGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTg > 1:54273/1‑150 (MQ=255) gTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGc < 1:7692715/150‑1 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 1:3883637/1‑150 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 1:4351816/1‑150 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 1:2828789/1‑150 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGGTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 2:2259427/1‑150 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 2:1407051/1‑150 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCATGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa > 2:2489317/1‑140 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCATGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGa < 1:2489317/140‑1 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:4614789/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:3360956/1‑150 (MQ=255) ccAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGa < 1:3765564/150‑1 (MQ=255) cAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGAc > 1:5343527/1‑150 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGcc > 1:6876895/1‑150 (MQ=255) cTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGtt < 1:1376690/150‑1 (MQ=255) aTCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGAc > 1:8726215/1‑66 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTcc > 2:8901342/1‑150 (MQ=255) ccccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCtt < 2:277457/150‑1 (MQ=255) ccccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCtt < 2:1359901/150‑1 (MQ=255) cccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTTg > 1:2595622/1‑150 (MQ=255) cccccTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTTg > 1:1724355/1‑150 (MQ=255) | GCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCTTGA > NC_002947/5151265‑5151562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |