| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,164,567 | A→T | 5.9% | intergenic (+120/+81) | PP_4544 → / ← PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,164,567 | 0 | A | T | 5.9% | 490.8 / 14.3 | 152 | intergenic (+120/+81) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| Reads supporting (aligned to +/- strand): ref base A (49/94); new base T (2/7); total (51/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
TGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGA > NC_002947/5164419‑5164716 | tGCAGGTAGCCCTGGAAGCCAAGTTCTACGCAACACCCTGCTCTGCTTCACCTGAGGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTAt < 1:998590/150‑1 (MQ=255) gTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATcacca < 2:4960519/150‑1 (MQ=255) tAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATcaccac < 2:2146253/150‑1 (MQ=255) aCCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATACGGCGTTTGCCGCTTATTTTTTTGTGTGTGTAATGGGCCGGCCCCGTAGCGGGGTTGGCGGCTACCACAGGATGAACACAGa > 2:6554965/1‑150 (MQ=255) ggAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCtt < 1:663332/150‑1 (MQ=255) ggAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCGGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCtt < 1:7331893/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGACGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTga < 1:1223283/150‑1 (MQ=255) aaGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTga < 2:796542/150‑1 (MQ=255) ctggccaaaggctcgttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTgag < 2:971623‑M1/45‑1 (MQ=255) aGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTgag < 1:2047498/150‑1 (MQ=255) ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGaa < 2:1750420/150‑1 (MQ=255) gTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACtgt < 2:1536636/150‑1 (MQ=255) gTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACtgt < 2:1536490/150‑1 (MQ=255) ttCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAACCGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACtgtg < 1:1170064/150‑1 (MQ=255) ttCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGACCtgtg < 1:2153690/150‑1 (MQ=255) ttCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCGTGCCCCCGCCCACACTATAAACACAGACCAGGAGAAcaggg > 2:8316697/1‑146 (MQ=255) cTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCt < 2:2429174/150‑1 (MQ=255) tcgttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGGTACACCACAGACCTTGAGAACTGTGCTGTa > 2:8640213‑M1/94‑150 (MQ=255) tcgttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGGTACACCACAGACCTTGAGAACTGTGCTGTa > 1:7693344‑M1/94‑150 (MQ=255) gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc < 2:4305174/150‑1 (MQ=255) ttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCt > 2:363400‑M1/91‑150 (MQ=255) ttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCt > 1:6332843‑M1/91‑150 (MQ=255) acacCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtg < 1:8567338/150‑1 (MQ=255) cacCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtgt < 2:3718960/150‑1 (MQ=255) ggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggctcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTTCTGTACCtgtg > 2:3619984‑M1/88‑150 (MQ=255) ggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGTGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtg > 1:6531976‑M1/88‑150 (MQ=255) acCCTGCTCTGCTTCACCTGAAGGGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtg < 1:5771044/150‑1 (MQ=255) gcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg > 1:7563391‑M1/87‑150 (MQ=255) gcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg > 2:7565528‑M1/87‑150 (MQ=255) cccTGCTCTGCTTCACCTGACGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 2:224662/150‑1 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 2:6135175/150‑1 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 2:8904570/150‑1 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 2:2195328/150‑1 (MQ=255) cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 2:6818839/150‑1 (MQ=255) ccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGCCCCCATACGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCCCAGTATCACCACACACCATGGGTACAGTGCTGTACCTGTggg > 2:9089672/1‑150 (MQ=255) gtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGa > 1:971633‑M1/85‑150 (MQ=255) gtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGa > 1:4137472‑M1/85‑150 (MQ=255) ctgctctgctTCACCTGAAGCGGGAAACGCCGACCCCACCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGa < 2:5749705/150‑1 (MQ=255) tgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAg > 2:7305179‑M1/84‑150 (MQ=255) tgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAg > 2:7305266‑M1/84‑150 (MQ=255) gttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc > 1:8454710‑M1/83‑150 (MQ=255) gttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc > 2:6724398‑M1/83‑150 (MQ=255) gttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc > 2:4812092‑M1/83‑150 (MQ=255) tgagctcgtttggtgcgaggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCgg > 1:7646219‑M1/81‑150 (MQ=255) tctgctTCACCTGACGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCgg < 1:5614594/150‑1 (MQ=17) tctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCgg < 2:7775226/150‑1 (MQ=255) tctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCgg < 1:6648352/150‑1 (MQ=18) ctTCACCTGCAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCATTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCaa < 2:6413428/150‑1 (MQ=255) ctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCaa < 2:1068790/150‑1 (MQ=255) tttggtggggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACATTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGccc > 1:3316379‑M1/73‑150 (MQ=255) gtttgggggggggttttcgtttgtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGccc > 1:6048289‑M1/73‑150 (MQ=255) tggtggggggtattcgattggtagtttgattctgcgcatgcgctgattcatctggcgccttttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACGTGTGGTAGCGGGCAAGCCcgc > 2:837104‑M1/71‑150 (MQ=255) tGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCCCAGTATCACCACAGACCTGGGGGACTGTGCTGTACCTGGGGGAGCGGGCCAGCCcgcg > 2:8266028/1‑150 (MQ=39) cgCGGTAAACGCCGACCCCAGCGGGGGTTCCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACATACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAag < 1:3721036/149‑1 (MQ=37) gACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCCCTCCCACAGTATAACCACAGACCATTATAACATTGCTGTACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAgg > 2:8303046/1‑150 (MQ=38) ccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCCCTCCCACAGTATCACCACAGACCTGGAGAACTGTGCTGTACCGGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGAACAGGCGcc > 2:8150283/1‑150 (MQ=38) gcggggttttCCCGCTTATTTTTTTCTGTGTTACCTGCGCCGGCCCCTGCGGGGGCTGGCCCGCACCCACATTAACACCACCTACATTGATAAGTGTGCTGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtga < 1:8187983/143‑1 (MQ=19) gTTTCCCGCTTCTTTTTGTCTGTGTGAATTGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACTGACCTTTATACCTGTGGTGTACCTGTGGGCGGGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATc < 2:3183717/150‑1 (MQ=38) gtccccGCTTCTTTTGGTCGGTGTGAATTGCGCCGGCCCCTTCGCGGGCTGGCCCGCTCCCACATTAACCCCACTGACCTTGAGACCTGGGCGGTACGTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCa < 1:8316697/147‑1 (MQ=25) cGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACACTAACACCCCAGCACATGAGAACTGTGCTGTAACAGTGGGTGCGGGCAAGCCCCCGAAGAGGCCGTAAACCGCGCCAGATGAAACAGCGCt > 2:8791873/1‑150 (MQ=25) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg < 1:3743980/97‑1 (MQ=255) gCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg > 2:3743980/1‑97 (MQ=255) tttttGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCCCCCCCAATATAACCACAGACCTTGAGAACAGTGCAGTACCAGTGGGAGCGGGCAAGCCCCCGAAGAGGCCGGAACAGGCGCCAGATGAAAAAGCCCGTGCGCa > 2:7474496/1‑150 (MQ=255) gTCTGTGTGAAATGCGCCGGCCCCTGCGCGGGCTGGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATc < 2:8940912/150‑1 (MQ=255) cTGTGTGAAAGGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATcac < 2:8336240/150‑1 (MQ=255) gtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCAACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTa < 2:4377146/150‑1 (MQ=255) tgaacggcgcCGGCCCCTTCGCGGGCTGGCCCGCCCCCCCCGTATCACCCCAGACCTTGAGAACTGTGCTGTACCTGGGGGAGCGGGCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTAc < 2:6424531/144‑1 (MQ=255) tgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCACCCCCAGTACCACCCCAGACCTTGAGAACTGTGGTGTACCTGTGGGAGGGGGAACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTAc < 2:6424530/150‑1 (MQ=255) aaTGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCCCAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCaa < 2:7265473/150‑1 (MQ=255) gcCGGCCCCTTCGGGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGaa < 2:4308858/150‑1 (MQ=255) cGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATa < 2:5237298/150‑1 (MQ=255) ccccTTCGCGGGCTTGCCCGCACCCCCAGTAGAACCACAGACCTTGAGACCGGTGCTGTACCTGGGGGCGCGGGCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATAccc < 1:9026507/150‑1 (MQ=255) gggttggcccgcccCCACATTATCACCACACACTTTGATATGGGGGGTGTACCGGGGGGTGGGGGCACGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCaaa < 1:7754675/144‑1 (MQ=255) GGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATAACACTACCAATCGAATACCCCGCACCaaa < 1:7281251‑M1/150‑1 (MQ=255) GGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAAc > 2:9141591‑M1/1‑150 (MQ=255) GCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACg < 2:3712276‑M1/150‑1 (MQ=255) GCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCt > 2:5508882‑M1/1‑150 (MQ=255) GCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCt < 2:3880071‑M1/150‑1 (MQ=255) CCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc > 2:8491715‑M1/1‑150 (MQ=255) CCCGCTCCAACAGTATCACCACAGACCTTGTGAACTGTGCTGTACCTGTGGGAGCGTGCATGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTc > 2:6432295‑M1/1‑150 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa > 2:9051252‑M1/1‑150 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 1:3271522‑M1/150‑1 (MQ=255) CCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 1:7801879‑M1/150‑1 (MQ=255) CCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCa < 1:7139239‑M1/150‑1 (MQ=255) CGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCaa < 2:1189434‑M1/150‑1 (MQ=255) CGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACACCGCACCAAACGAGCTCaa < 2:7639153‑M1/150‑1 (MQ=255) GCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCaaa > 1:1958459‑M1/1‑140 (MQ=255) GCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCaaa < 2:1958459‑M1/140‑1 (MQ=255) TCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAacac < 2:1669586‑M1/150‑1 (MQ=255) TCCCACAATATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAacac < 1:6546764‑M1/150‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc < 1:6347028‑M1/150‑1 (MQ=255) CCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGc < 1:5355818‑M1/150‑1 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGcc > 1:964332‑M1/1‑68 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc < 1:2962561‑M1/150‑1 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc < 2:262630‑M1/150‑1 (MQ=255) CACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGcc < 2:4512013‑M1/150‑1 (MQ=255) ACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc < 1:8242958‑M1/150‑1 (MQ=255) ACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGccc < 2:7054313‑M1/150‑1 (MQ=255) AGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGAGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCaa < 1:5110598‑M1/150‑1 (MQ=255) aTCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGa < 1:2614403/150‑1 (MQ=255) | TGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGA > NC_002947/5164419‑5164716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |