| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 278,754 | T→A | 8.8% | intergenic (‑249/+66) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,754 | 0 | T | A | 8.8% | 658.2 / 7.1 | 257 | intergenic (‑249/+66) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (97/126); new base A (24/5); total (125/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.78e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
AGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGC > NC_002947/278605‑278903 | aGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCt > 1:3687108/1‑150 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTaca < 2:2053024/150‑1 (MQ=255) tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTaca > 2:2161229/1‑150 (MQ=255) tCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTACTacacac > 1:3568533/1‑150 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGc > 2:5823773/1‑150 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGc > 2:6457690/1‑150 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCACCAACACACATGc > 2:860379/1‑150 (MQ=255) aCAGACGTGTGCTGGTCCGGTGGTCCGGTATATAAACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGcc > 1:5009355/1‑150 (MQ=255) aGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTc < 1:6191466/150‑1 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 1:1576690/150‑1 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCaa < 1:7641055/150‑1 (MQ=255) cGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAg < 2:3277512/150‑1 (MQ=255) gtgtGCTGGTCCGGTGGTCCGGTATATATACCCTCATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGACGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCCCTCCGACACACATGCCTCCAGa > 2:6173846/1‑150 (MQ=255) tgCTGGTCCGGTGGTCCGTTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:5124258/150‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCtgt < 1:5923466/150‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCtgt < 2:8492804/150‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCtgt < 2:18126/150‑1 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTAGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCCCGCCGACACACAAGCCTCAAGATAtgtg > 1:3329669/1‑150 (MQ=255) ccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACt < 1:1073173/150‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTg < 2:7787351/150‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCACCTACACACAAGCCTCAAGATCTGTGCACTg > 1:2401127/1‑150 (MQ=255) ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACAt > 1:4483927/1‑129 (MQ=255) ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATAGTTATAGACGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGAGCTGTGCACTGt > 2:6869268/1‑150 (MQ=255) tggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg < 2:8830931/150‑1 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAg < 2:436481/150‑1 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAg > 2:6614693/1‑150 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCg < 2:5933321/150‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTATAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCTGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 2:3389488/1‑150 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:4092912/150‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:3197641/150‑1 (MQ=255) ggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:6950728/150‑1 (MQ=255) gtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg < 2:3756851/150‑1 (MQ=255) atatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGtt < 2:3007681/150‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc > 1:1408038/1‑150 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc > 2:6714318/1‑150 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc < 2:2348783/150‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACAAGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTTcc > 1:7011386/1‑150 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgc < 2:7709476/150‑1 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:9080976/1‑150 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:6309000/1‑150 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:1581416/1‑150 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:3121901/1‑150 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCACAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 2:1228104/1‑150 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACCCCTGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGa > 1:5696756/1‑150 (MQ=255) aTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCCCTCCTACACACATGCCTCAAGATCAGTGCACGGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:50096/1‑150 (MQ=255) atttttttTGAAGTAACTGTTGGGATTATTTATAGAAGGGGGATTTGTTACAGAGGTGCGGGGATCTTCGCGGGTAAA‑CCCGCTCCTACAAACTTGCCTCAAGATCTGTGCACTGTAGGAGGGGGTTTACCCGCGAAAGGGCCGGAACAg < 2:5491008/148‑1 (MQ=255) aaTTTTTTTGAACTAACTTTTTGGAATATTTATTGACGGGTGTTTTGTTACAGAGGTGCGGGTCTTTCGGGGGGTAAA‑CCCGATCCTACACAGATGCCTCAAGATCTGTGCCCTGTAGGATCGGTTTTACCCGCGAAAGGGCCGGAACAg < 2:4283776/150‑1 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACCCCACCAAAACACAAGCCACAAGAAATGTGCACAGTATGAGCGGGTTTACCCCCGAAACGGCCGGAACAg > 1:1001083/1‑150 (MQ=255) tttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCCCTTCGCGGGTAAA‑CCCGCTCCTCCACACAGGCCTCAAGATCTGTGCTCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGt < 2:5587003/150‑1 (MQ=255) ttttATGACCTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 2:7309757/150‑1 (MQ=255) ttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGCGGGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 1:6741145/150‑1 (MQ=255) tttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACCCCACCGAAAAACAATCCAAAAGATAAGTGCCCAGTAGGAGCCGGGTTAACCCCCAAACGGCCGGAAAAGGttt > 1:6910461/1‑150 (MQ=255) tttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACCCCACCAAAACAAAATCCACAAAAAAAGTGCAATGTAGGAGCGGGTTTAACCGCGAAATGGCCGGGACAGGttt > 1:2291775/1‑150 (MQ=255) aTGAACTAACTTTTTGGATTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACt < 2:8332253/150‑1 (MQ=255) aTGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACAGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACt > 2:9132601/1‑150 (MQ=255) cctaactTTTTGGAATATTTATTGAAGGGGGTTTTGTTCCCGCGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTCCACACATGCCGCAAGCTCTGTGCCCTGTTGGAGCGGGTTTCCCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 1:8172664/149‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACCCACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAg < 2:3629481/150‑1 (MQ=255) actTTTTGGAATATTTATATACGGGGGATTTGTTACCGTGGGGCGGGGCTCTTCGCGGTTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 1:2854164/150‑1 (MQ=38) actTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAT‑CCCGCTCCTACACACATGGCTCAAGATGTGTGGAGTGTAGGAGCGGGTTTAGCCGCGAAAGGGGCGGTACAGGTTTACTCGGAgggc > 2:4574666/1‑148 (MQ=255) ctTTTTGGAATATTTATAGAAGGGGGATTTGTTACCGCGGTGCCGGGCTCTTCGCGGTTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCg < 2:3173616/150‑1 (MQ=255) tttttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGAACTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGc > 2:7644344/1‑150 (MQ=255) ttttGTAATATTTATAGATGGGGGATTTGTTCCAGAGGTGCCGGGCTCTTCGCGGTTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCa < 1:1374592/150‑1 (MQ=255) ttttGTAATATTTATAGACGGGGGATTTGTTACAGAGGGGCCGGGCTCTTCGCGGTTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCa < 1:5899150/150‑1 (MQ=255) ttttGTAATATTTATAGAAGGGGGATTTTTTACAGAGGTGCCGGGCTCTTCGCGGTTAAA‑CCCGATCCTACACACATGCCTCAAGATCTGTGCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCa < 2:935581/150‑1 (MQ=39) ttttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGGGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACCTGCCACAAGATCTGGGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCa < 2:8051779/150‑1 (MQ=255) taaTATTTATTGATGGGGTATTTTTTACAGTGGTGCCGGGCTCTTCGCGGGAAAA‑CCCGCACCAACACACATGCCACAAGATGTGTGCACTGTCGGCGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTccc < 1:6309000/149‑1 (MQ=255) atatTTATAGTTGGGGTTTTTGTTACAGCGGTGCGGGGCTCTTCGGGGGAAAC‑CCCGCTCCACCCAACATGCCTCAAGATCTGGGCCCGGGCGGAGCGGTTTAACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGa < 1:5449390/150‑1 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAg < 2:482245/150‑1 (MQ=255) atTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACCCCTCCAAAACACAAGCCACAACATATTTGCACAGTAGGAGCGGGTTTACCCCCGAAATGGCCGGAAAAAGTTTAAAAGGAGGCCGCAGTCCCCAgg > 1:4928476/1‑150 (MQ=255) tattGAGGGGGTTTTTTTTACTGTGGTGGGGGGCTCTTCGGGGGAAAA‑CCCGCTCCTACAAACATGCCTCAAGTTCTGTGCACTGTTGGCGGGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAc < 1:2617163/150‑1 (MQ=255) taGAAGGGGGATTTGTTACCGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACCCATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACtt < 2:8780182/150‑1 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACtt > 2:5651172/1‑150 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTTAA‑ACCCCTCCAAAACCCAATCCACAAGAACAGGGGACGGTAGGAGCGGGTTTACCCCCGCAAAGGCCCGAACAGGTTTAAAAGGAGGCCGCAGTCCCGCGGCAcaagc > 1:837692/1‑146 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCCCCCCAAAACACAAGCCACAAGATCTGTGCACGGTAGGAGCGGGTTTACCCCCCAAAGGGCCCGCACACGTTTAATCCGAGGCCGCCGTCCCCAGGAACATgcc > 1:3871845/1‑149 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGGTAA‑CCCCCTCCAACACACATGCCTCAATATCTGGGCACAGTCTGAGCGGGGTTACCCGCGAAAGGGCCGGAACAGGTTTTATAGGAGGCCGCAGTCCCGAGGAACTTtcg > 1:8566656/1‑150 (MQ=255) tACAGAGGTGCGGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 2:4711136/150‑1 (MQ=255) tACAGAGGTGCCGGGCTGTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGGGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 2:3257460/150‑1 (MQ=255) aactgtggTGCGGGGCTC‑TAGGGGGTAAACCCCGCTCCTACCCACCTGCCACAAGAACTGGGCCGTGTCGGCGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 1:1795403/144‑1 (MQ=255) cAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACCGCACCAAAACACATGCCTCAATATCTGTGCACAGTAGGAGCGGGTTTACCCCCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCCAGGAACATGCGCAAGAACAGCCGCGt > 1:8976078/1‑150 (MQ=255) agGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGGAAGGGCCGGAACAGGTTTACTCGGAGGGCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg > 2:3909969/1‑150 (MQ=255) cGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttc < 2:2892097/150‑1 (MQ=255) ggCTCTTCGCGGGTAAA‑ACAGCTCCTACACACAATCCACAATATCTGTGCACTGGAGGATCGGGTTTTCCCCCGACAGGGCCGGAACAGGTTTACTCGGCGGCCGCAGGAACGAGGACCTTTCGCAAGTCCGGCCGCCTAAGCActtact > 2:7060536/1‑150 (MQ=255) ctctTCGCGGGTAAA‑CCCGCTCCTACACACTTGCCCCACGATCTGTGCACTGTTGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttccttc < 2:3981905/150‑1 (MQ=255) ctctTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttccttc < 2:1001083/150‑1 (MQ=255) ttCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGgc > 2:1072026/1‑150 (MQ=255) tggggtttAAA‑CCCGCTCCTCAACACATGCCTAAATTGCTGTGCACGTTTGGTGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGgcg < 1:4329533/143‑1 (MQ=255) gcgGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCt < 2:5189037/150‑1 (MQ=255) gTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCaa > 1:5352620/1‑150 (MQ=255) aa‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACa > 1:8834140/1‑150 (MQ=255) a‑CCCGCTCCTACAAACATGCCTAAAGATCTGTGCAGTGTTGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAg < 1:7030012/150‑1 (MQ=255) cccGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAgg > 1:7601505/1‑150 (MQ=255) cccGCTCCTACACAATTGCCTCAATTTCTGTGATCTTTTGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAgg < 1:1769809/150‑1 (MQ=255) ccGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGTAGTCCCGAGGACCTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAggg > 1:742334/1‑150 (MQ=255) ccGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGACCTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAggg > 2:8968938/1‑150 (MQ=255) ccGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAggg > 2:8511206/1‑150 (MQ=255) cTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTACGGCGCTGCAAACAGGGCCTTgg > 2:6093479/1‑150 (MQ=255) tACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttccttc > 1:8117414/1‑127 (MQ=255) tACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttccttc < 2:8117414/127‑1 (MQ=255) tACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGc > 2:1994273/1‑150 (MQ=255) tACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGc < 2:5335506/150‑1 (MQ=255) | AGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGC > NC_002947/278605‑278903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |