| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,194,729 | T→G | 9.2% | intergenic (+140/‑62) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,194,729 | 0 | T | G | 9.2% | 407.5 / 11.8 | 155 | intergenic (+140/‑62) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (64/68); new base G (13/4); total (81/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.87e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
GTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGT > NC_002947/5194580‑5194878 | gTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCt > 1:4443150/1‑150 (MQ=255) ctgactgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCtta < 1:7273918/150‑1 (MQ=255) gactgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCttatt < 2:1858244/150‑1 (MQ=255) ctgaGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAg < 2:7599269/150‑1 (MQ=255) tgaGACAGCGAGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTACACCCGCCCCTACAACCTTATTAgg > 1:6713106/1‑150 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCgg < 2:5138118/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCgg < 2:8532236/150‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCggg < 1:2507339/150‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCggg < 1:2103174/150‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCggg < 1:1757293/150‑1 (MQ=255) gCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGt < 1:8680379/150‑1 (MQ=255) cGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGtt < 2:4904663/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 1:7322138/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 2:5809006/150‑1 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAc < 1:8352484/150‑1 (MQ=37) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTAc < 1:1125721/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACGCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcgc < 2:7550861/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGGTTACCcgc > 1:8001604/1‑150 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCGTATTAGGCGCGGGTTTACCcgc > 1:8001397/1‑150 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCATATTAGGCGCGGGTTTTCCcgc > 1:5611248/1‑150 (MQ=255) cATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTAAAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGaa < 1:4967266/150‑1 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAaga < 2:903565/150‑1 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCAACAACCGTATTAGGCGCGGGGTTACCCCCGCaga > 1:6263048/1‑150 (MQ=255) aGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCTTCTTAGGCGCGGGTTTAACCGCGCAGAGGc > 1:6804968/1‑150 (MQ=255) gACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCg > 1:6059698/1‑150 (MQ=255) tACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCTTTATCGTCGGAAAAAAATCCTTATCTTGTGCTGCGTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGGGGGTTTACCCGCGAAGAGGCCCGCAAAGcc < 2:6876214/150‑1 (MQ=38) aCCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGccc > 2:8679374/1‑150 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTGGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTa > 2:848181/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga > 2:6578465/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCCCGTTATAGTCGCAAACAAATCCAGAACATGTGCTGCCTGATCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACAATATTAGCCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:1690978/150‑1 (MQ=38) gTTTGCAGCCGCCAGTCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGa > 2:1782499/1‑150 (MQ=255) gTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCACAGCCCTAAACAGA‑GGa > 2:7580358/1‑150 (MQ=255) gTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGa > 2:1782491/1‑150 (MQ=255) tttGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGAc > 2:5386597/1‑150 (MQ=255) tttGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAAACCCCCCCGACAAACATATTAGGCGCGGGTTTACCCGCGGAGAGGGCCCCAAACCCCAAAAAAGG‑GGAc > 1:2610137/1‑150 (MQ=255) cAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACCACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAc > 2:2592179/1‑150 (MQ=255) gccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCCCCCCAACAACCTTTATAGGCGCGGGTTTACACCCCGAGAGGCCCGCAAAACCCTAAAAATA‑GGACAAAccc > 1:6524504/1‑150 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAcccc < 2:6780971/150‑1 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAcccc < 2:6781080/150‑1 (MQ=255) gcccgcccccGCTTTTTAGTCGTAAACAAATAAATATCTTGGGCTGCCTGTTGGGGCCTCTTCGGGGTTAAACCCGCCCAAACAACCTTATTAGGGGGGGTTTTACCGGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCa < 1:7848028/144‑1 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAAACCCCCCCCACAACCAATATAGGCGCGGGGTTTACCGCGAAGAGGCCCCCCAAACCCAAAACAAAGGGAAAAAccccc > 1:2525169/1‑150 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt < 2:5904160/150‑1 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt < 2:5904257/150‑1 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt > 2:2622874/1‑150 (MQ=255) cAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAAACCCCCCCGACAACCGGATTATGCCCGGGTTTACCCCCGCACAGGCCCCCCAAACCCAAAACAGA‑GGCCAAAccccccag > 1:1601864/1‑147 (MQ=255) ggCCCGGCGTTATTGTCGGAAACAATTCCTGTTCAGGTGCGGCCTGTTCGGGCCTCTTGGGGGGTAAACCCGCCCCTACAACGTTTTTAGGGGGGGGTTTACCGGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGaa < 2:933273/150‑1 (MQ=255) gCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGGGGGTAAACCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAg < 2:6534858/150‑1 (MQ=255) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTc > 2:3614546/1‑150 (MQ=255) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTc > 2:1233069/1‑150 (MQ=255) cgTTATAGTCGGAAACAAATCCAGATCAGGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCCTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGaa < 2:8484201/150‑1 (MQ=255) gTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAg < 2:6730101/150‑1 (MQ=255) ataGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAAACCCCCCCAACAAACGTATTAGGCGCGGGTTTACCCCCGCATAGGCCCCCAAAACCCAAAAAAGA‑GGACAAAAACCCATGAAGTTAGAATGCa > 1:7755159/1‑150 (MQ=255) taGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCCCCCCAACAAACATATTACGCGCGGGGGTTCCCGCCCAGGGGCCCCCAAAGCCCAAAAAACA‑GGACAAACCCCCAAGAAAGTAGAAGGCaa > 1:940650/1‑149 (MQ=255) aGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCAcc > 2:3433820/1‑150 (MQ=255) ggAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTTAACCCCCCCCGACAACCGTATTTTGCGCGGGTTTAACCGCGAAGAGGCCCCCAAAGCCCGAAACAGA‑GGACAAACCCCCAAGAAGTTGGAAGGCCCCcccg > 1:6427409/1‑150 (MQ=255) aaCAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACt > 2:6302331/1‑150 (MQ=255) aaCAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTAGCGGGTAAAACCGCCCCTACAAACTTATTTTGGGCGGGTTTTACCGAGAAGATGCCCGCAAAGCCCTAAAAATA‑GGAAAAAACCCCATGAAGTTAGAATGGAACCGCGaat > 1:6621093/1‑148 (MQ=255) cAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTAc < 2:4478065/150‑1 (MQ=255) tCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAg < 2:6222439/150‑1 (MQ=255) tCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAACCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAg > 1:6845092/1‑150 (MQ=255) tgctgcGTTTTCGGGCCTCTTCGGGGTTAAACCCGCCCCAAAAACCTTTTTCGGCGGGTTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAc < 1:1560618/150‑1 (MQ=255) ctgcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCt < 2:940650/150‑1 (MQ=255) tggggCCTCTTGGGGGTTAAACCGGCCCCGACACCCTTATTTGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGAGTACGTCGCCACAGATGACCTGAAACTgg < 1:5953827/148‑1 (MQ=255) tCGGGCCTCTTCGCGGGTAAACCCGCCCCTACCACCTTAGTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 2:5745270/150‑1 (MQ=255) tCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 1:5954099/150‑1 (MQ=255) tCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 1:3777937/150‑1 (MQ=255) cGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGc < 2:7897798/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg > 2:4897669/1‑150 (MQ=21) gggCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg < 1:9040086/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg < 2:836913/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGACCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCCCAGATGACCTGAAACTGGCg > 2:6680183/1‑150 (MQ=255) ggCCTCTTCGCGGGTAAACCCCCCCCAACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGCCAAAACCCCATGAAGTTCGCAGGCACCCCCGACAACGTCGCCACAGATGACCGGAAACTGGCgg > 1:710767/1‑150 (MQ=38) gCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGGGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGt < 1:5578296/150‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCAGAAACTGGCGGt > 2:507247/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTaa > 2:2723920/1‑150 (MQ=255) ctTCGCGGTTAAACCCGCCCATACAACCTTATGCGGCGCGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAc < 1:1014016/150‑1 (MQ=255) ttCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCa < 1:5171064/105‑1 (MQ=255) ttCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCa > 2:5171064/1‑105 (MQ=255) ttCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcg > 1:4447376/1‑150 (MQ=255) tCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgc < 2:7233697/150‑1 (MQ=255) tCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgc > 2:3740986/1‑150 (MQ=255) gcgGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCgg > 2:1191510/1‑150 (MQ=25) cgGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGc < 2:2309744/150‑1 (MQ=255) gggTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAGGAGGCCCGCAAAGCCCTAAACGGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGACGCCACAGATGACCGGAAACTGGCGGAAAACGCGGcc > 2:5090967/1‑150 (MQ=255) ggTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCa > 1:4103844/1‑150 (MQ=255) gTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:8833599/1‑150 (MQ=255) gCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTACACGCGGCCAGTACCCTCg > 2:6937109/1‑150 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 2:5676259/1‑150 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 1:4828604/1‑150 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 2:227366/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 1:3229965/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:9159052/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:4050649/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 2:2588714/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:2189592/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 2:6405719/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:3107561/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:5478610/1‑150 (MQ=255) cTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTg > 1:9140028/1‑150 (MQ=255) ttattaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGt > 1:778045/1‑150 (MQ=255) | GTCTGACTGAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGT > NC_002947/5194580‑5194878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |