| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,194,737 | C→G | 7.1% | intergenic (+148/‑54) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,194,737 | 0 | C | G | 7.1% | 499.7 / 15.2 | 158 | intergenic (+148/‑54) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base C (78/68); new base G (4/8); total (82/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAG > NC_002947/5194588‑5194886 | gagaCAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGgc > 1:8886710/1‑150 (MQ=255) gaCAGCGTGACGGGGCATTCACGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGgcgc < 1:5703641/150‑1 (MQ=255) aCAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCTTATTAGGcgcg > 1:7897798/1‑150 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:938927/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:5138173/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 2:1024995/150‑1 (MQ=255) cAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCgg < 1:7605792/150‑1 (MQ=255) aGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCggg < 1:1757293/150‑1 (MQ=255) gCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGt < 2:8886710/150‑1 (MQ=255) tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTa < 2:5809006/150‑1 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAc < 1:1125721/150‑1 (MQ=255) aCGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAcc < 1:7170401/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 2:5482508/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTGCGGGCCTCTTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAccc < 1:2335959/150‑1 (MQ=25) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcgc < 2:7551408/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCGTATTAGGCGCGGGTTTACCcgc > 1:8001397/1‑150 (MQ=255) ggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTGCGCGGGTAAA‑CCCGCGCCTAATACGGTTGTCGGGGCGGGTTTACCcgcg < 1:4915590/150‑1 (MQ=37) cATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTAAAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGaa < 1:4967266/150‑1 (MQ=255) ttCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAaga < 2:903565/150‑1 (MQ=255) aGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCGACAACCTTCTTAGGCGCGGGTTTAACCGCGCAGAGGc > 1:6804968/1‑150 (MQ=255) gACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCg > 1:6059698/1‑150 (MQ=255) tACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGcc > 1:2061400/1‑150 (MQ=255) ccGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTGGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTa > 2:848181/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCggg > 1:8406356/1‑114 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga > 2:6578465/1‑150 (MQ=255) tGCGTTTGCAGCCGCCAGGCCCCCCGTTATAGTCGCAAACAAATCCAGAACATGTGCTGCCTGATCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACAATATTAGCCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACaga < 2:1690978/150‑1 (MQ=38) gTTTGCAGCCGCCAGTCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGa > 2:1782499/1‑150 (MQ=255) tttGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGAc > 2:5386597/1‑150 (MQ=255) tttGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑ACCCCCCCGACAAACATATTAGGCGCGGGTTTACCCGCGGAGAGGGCCCCAAACCCCAAAAAAGG‑GGAc > 1:2610137/1‑150 (MQ=255) cAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACCACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAc > 2:2592179/1‑150 (MQ=255) gccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCAACAACCTTTATAGGCGCGGGTTTACACCCCGAGAGGCCCGCAAAACCCTAAAAATA‑GGACAAAccc > 1:6524504/1‑150 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAcccc < 2:6781051/150‑1 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAcccc < 2:6781080/150‑1 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAcccc > 2:6819871/1‑150 (MQ=255) cgccAGGCCCCGGTTTATAGTCTTAAAAAAATCCCTTTCAGTTGCTGCCTTTTGGGGCCTCTTCGCGTTTAAA‑CCGGCCCATACAACCTTATTAGGCGCGGGTTTACCCGCTAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAAccccc < 2:2304790/150‑1 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGCCAAACCCCCa > 1:4370723/1‑150 (MQ=255) gccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑ACCCCCCCCACAACCAATATAGGCGCGGGGTTTACCGCGAAGAGGCCCCCCAAACCCAAAACAAAGGGAAAAAccccc > 1:2525169/1‑150 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt < 2:5904257/150‑1 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt < 2:5904160/150‑1 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCAt > 2:2622874/1‑150 (MQ=255) gCCCCGGGTTATCGTCGTAAACAAATCCTGATCATGTGGTGCGTGTTCGGGCCTCTTCGCGGTAAAA‑CCCCCCCCAACAACCTTTTTCGGGGGGGTTTTCCCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAg < 1:6490120/150‑1 (MQ=255) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTc > 2:1233069/1‑150 (MQ=255) gttttttgTCGTAAACAAATCCAGTTCATGTGCTGCGTGTTGGGGCCTCTT‑GGGGGTAAACCCCGCCCCAAAAACCTTTTTCGGCGGGGGTTTCCCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGaa < 1:6171855/143‑1 (MQ=255) gTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAg < 2:6730101/150‑1 (MQ=255) tataGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGttt < 2:2558200/90‑1 (MQ=255) ataGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑ACCCCCCCAACAAACGTATTAGGCGCGGGTTTACCCCCGCATAGGCCCCCAAAACCCAAAAAAGA‑GGACAAAAACCCATGAAGTTAGAATGCa > 1:7755159/1‑150 (MQ=255) aGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCAcc > 2:3433820/1‑150 (MQ=255) aaCAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACt > 2:6302331/1‑150 (MQ=255) aTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTc < 1:6666856/150‑1 (MQ=255) acaaGATCTTGTGGTGCCTTTTGGGGCATCTTCGGGGTTAAA‑CCCGCCCATACAACCTTTTTCGGCGGGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCg < 1:5386597/147‑1 (MQ=255) cgATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca < 2:6427409/149‑1 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca > 2:6300726/1‑150 (MQ=255) gATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCcac < 2:4735733/150‑1 (MQ=255) tCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAg < 2:6222439/150‑1 (MQ=255) tgtgCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATg > 1:6854116/1‑150 (MQ=255) tgctgcGTTTTCGGGCCTCTTCGGGGTTAAA‑CCCGCCCCAAAAACCTTTTTCGGCGGGTTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAc < 1:1560618/150‑1 (MQ=255) tgctgcCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAc < 2:7594257/150‑1 (MQ=255) ttCGGGCCTCTTCGCGGGTAAA‑CCCCCCCCGACAACCGTATTAGGCGCGGGGTTACCCCCGAAGAGGCCCGCAAAGCCCGAAACAGA‑GGACAAAACCCCCTGAACTTCGAAGGCACCCCCCACTACGTCGCCCCACATGACCCGAAAcag > 2:1737944/1‑148 (MQ=255) tCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 1:3777937/150‑1 (MQ=255) tCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTgg < 1:5954099/150‑1 (MQ=255) cGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGc < 2:7897798/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg > 2:4897669/1‑150 (MQ=21) gggCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg < 2:836913/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGACCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCCCAGATGACCTGAAACTGGCg > 2:6680183/1‑150 (MQ=255) gCCTCTTCGCGGTTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGt < 1:8221609/150‑1 (MQ=255) gCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGGGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGt < 1:5578296/150‑1 (MQ=255) gCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCAGAAACTGGCGGt > 2:507247/1‑150 (MQ=255) ctctTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTaa > 2:2723920/1‑150 (MQ=255) ctTCGCGGTTAAA‑CCCGCCCATACAACCTTATGCGGCGCGGTTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAc < 1:1014016/150‑1 (MQ=255) ttCGCGGGTAAA‑CCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcg > 2:513387/1‑150 (MQ=25) tCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAAcgc < 2:7233697/150‑1 (MQ=255) gcgGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCgg > 1:4484272/1‑150 (MQ=255) gggTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAGGAGGCCCGCAAAGCCCTAAACGGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGACGCCACAGATGACCGGAAACTGGCGGAAAACGCGGcc > 2:5090967/1‑150 (MQ=255) gTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:1631321/1‑150 (MQ=255) gTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCAt > 1:8833599/1‑150 (MQ=255) cccGCCCCTACACCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc < 2:8515905/150‑1 (MQ=255) cccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc > 2:3527190/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:4110167/1‑150 (MQ=255) gCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTACACGCGGCCAGTACCCTCg > 2:6937109/1‑150 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 2:5676307/1‑150 (MQ=255) cccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGaa > 2:227366/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 2:9159052/1‑150 (MQ=255) tACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc > 1:3229965/1‑150 (MQ=255) aCAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGcc > 2:3216932/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:2189592/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:4050649/1‑150 (MQ=255) ccTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:3107561/1‑150 (MQ=255) cTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTg > 1:7800905/1‑150 (MQ=255) cTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTg > 1:9140028/1‑150 (MQ=255) ttattaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGt > 1:5550358/1‑150 (MQ=255) ttaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTgg > 2:7477211/1‑150 (MQ=255) ttaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTgg < 2:8527457/150‑1 (MQ=255) gtaGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTgg < 2:8623822/149‑1 (MQ=255) ctcttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTgg > 2:6684326/6‑150 (MQ=255) tcttcgcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGt > 2:370646/5‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:9163696/3‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:3991653/3‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:9163731/3‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:7056006/3‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:6291228/3‑150 (MQ=255) | GAGACAGCGTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAA‑CCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGA‑GGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAG > NC_002947/5194588‑5194886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |