Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 295,694 C→G 8.1% intergenic (+41/+101) PP_0241 → / ← PP_0242 transporter/TetR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947295,6940CG 8.1% 965.8 / 54.6 294intergenic (+41/+101)PP_0241/PP_0242transporter/TetR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (119/151);  new base G (13/11);  total (132/162)
Fisher's exact test for biased strand distribution p-value = 3.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 298 total aligned reads displayed.

CGTCACTTCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGAT  >  NC_002947/295545‑295841
                                                                                                                                                     |                                                                                                                                                   
cGTCACTTCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGcc                                                                                                                                                     <  2:2527724/150‑1 (MQ=255)
cGTCACTTCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGcc                                                                                                                                                     <  2:854302/150‑1 (MQ=255)
     cTTCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAc                                                                                                                                                >  1:3061386/1‑150 (MQ=255)
         ggTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGccc                                                                                                                                            <  1:2890577/150‑1 (MQ=255)
              ttACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTcc                                                                                                                                       <  2:8221418/150‑1 (MQ=255)
                accaccCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCca                                                                                                                                     >  1:4941542/1‑150 (MQ=255)
                 ccaccCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCGGCCCTTCGCGGGCAagcccgctcccac                                                                                                                                    >  2:6204682‑M1/1‑137 (MQ=255)
                 ccaccCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCcac                                                                                                                                    <  1:4511550/150‑1 (MQ=255)
                 ccaccCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCcac                                                                                                                                    >  2:1555567/1‑150 (MQ=255)
                   ccccGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAg                                                                                                                                  <  1:5867355/149‑1 (MQ=255)
                   accCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAg                                                                                                                                  >  1:8888025/1‑150 (MQ=255)
                           cGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGc                                                                                                                          <  2:3160394/150‑1 (MQ=255)
                           cGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGc                                                                                                                          >  2:3799322/1‑150 (MQ=255)
                             tGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCaa                                                                                                                        <  1:814749/150‑1 (MQ=255)
                             tGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCaa                                                                                                                        <  2:7080196/150‑1 (MQ=255)
                               cGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGc                                                                                                                      >  2:5219275/1‑150 (MQ=255)
                                gggAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCt                                                                                                                     >  2:1274468/1‑150 (MQ=255)
                                   cgcatggccgaggaaggcaagcgggtgttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcaGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCa                                                                                                                  >  1:3497996‑M1/106‑150 (MQ=255)
                                   aGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCa                                                                                                                  <  1:6123068/150‑1 (MQ=255)
                                      tGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAggg                                                                                                               >  1:3339302/1‑150 (MQ=255)
                                       ggAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTTCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGt                                                                                                              <  2:416609/150‑1 (MQ=255)
                                       ggAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGt                                                                                                              <  1:5456717/150‑1 (MQ=255)
                                       ggAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGt                                                                                                              >  1:7680968/1‑150 (MQ=255)
                                       ggAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGt                                                                                                              <  2:5037798/150‑1 (MQ=255)
                                           ttGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTgcgc                                                                                                          >  1:7427067/1‑150 (MQ=255)
                                              cAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGcc                                                                                                                                             >  2:3658961/1‑112 (MQ=255)
                                              cAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGcc                                                                                                                                             <  1:3658961/112‑1 (MQ=255)
                                              cAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGcgcgcg                                                                                                       <  2:3016535/150‑1 (MQ=255)
                                              cAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGcgcgcg                                                                                                       <  2:992526/150‑1 (MQ=255)
                                                ggTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCggg                                                                                                     >  2:2220612/1‑150 (MQ=255)
                                                    ggCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGctct                                                                                                 <  2:7747323/150‑1 (MQ=255)
                                                     gCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAcgcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctg                                                                                                <  2:7937730‑M1/150‑50 (MQ=255)
                                                      cAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAcgcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgt                                                                                               <  1:2200292‑M1/150‑51 (MQ=255)
                                                      cAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCtgt                                                                                               <  2:5448476/150‑1 (MQ=255)
                                                       agtgaagtgaTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCtgtg                                                                                              >  1:4854627/1‑150 (MQ=255)
                                                        gtgaagtgaTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAcgcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgg                                                                                             <  2:2976004‑M1/150‑53 (MQ=255)
                                                        cgggtgttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgctttgcaGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGctctgcgg                                                                                             >  1:5190859‑M1/85‑147 (MQ=255)
                                                          ggtgttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCGGGCAAGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGa                                                                                           >  1:8816671‑M1/83‑150 (MQ=255)
                                                          gaagtgaTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAcgcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtggga                                                                                           <  1:2233260‑M1/150‑55 (MQ=255)
                                                            tgttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCGGGCAAGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGc                                                                                         >  1:898036‑M1/81‑150 (MQ=255)
                                                            agtgaTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAcgcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagc                                                                                         <  2:6507768‑M1/150‑57 (MQ=255)
                                                             gttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCg                                                                                        >  2:6485445‑M1/80‑150 (MQ=255)
                                                              ttcgaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCGGGCAAGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCgg                                                                                       >  1:6837121‑M1/79‑150 (MQ=255)
                                                              tgaTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCgg                                                                                       <  2:8840867/150‑1 (MQ=255)
                                                                atagCCTTAGTGAAGTCGAACCAAGTGACTATCGCCAAGCTGTGATGCGGCGGGTCGATATAGGGGCTGCTATGCAGCCCAACGCCGGCACGCCCGCTCCCACAGGAACTCGCAAGCTCCAGGGTGCGCGCGGGCTCGGTGGGAGCGGGc                                                                                     >  2:197254/4‑150 (MQ=255)
                                                                aTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAgg                                                                                                                <  1:5526647/123‑1 (MQ=255)
                                                                aTTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGc                                                                                     <  2:5840367/150‑1 (MQ=255)
                                                                 gaagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCGGGCAAGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCgg                                                                                                      <  2:1329266‑M1/57‑1 (MQ=255)
                                                                  tGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTt                                                                                   <  2:2289507‑M2/150‑2 (MQ=255)
                                                                  tGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTt                                                                                   >  1:1555567‑M2/1‑149 (MQ=255)
                                                                  aagcgtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCtt                                                                                   >  1:2948027‑M1/75‑150 (MQ=255)
                                                                    ccTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCAagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcgtgc                                                                                 <  1:1085201‑M1/150‑65 (MQ=255)
                                                                    ccTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTtgc                                                                                 <  2:4854278‑M2/150‑4 (MQ=255)
                                                                     cTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTtgcc                                                                                <  1:3728773‑M2/150‑5 (MQ=255)
                                                                      gtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGccc                                                                               >  2:3380715‑M1/71‑150 (MQ=255)
                                                                       tatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcaGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCcg                                                                              >  1:402863‑M1/70‑150 (MQ=255)
                                                                        tgtgAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCcgc                                                                             <  1:2362268/150‑1 (MQ=255)
                                                                        tgtgAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCcgc                                                                             <  1:2056485/150‑1 (MQ=255)
                                                                         gtgAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCGGGCAagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcgtgccggcg                                                                            <  2:7758175‑M1/150‑70 (MQ=255)
                                                                          tgAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGa                                                                           <  1:2405328/150‑1 (MQ=255)
                                                                           gAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGaa                                                                          <  2:4600832/150‑1 (MQ=255)
                                                                           gAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGaa                                                                          <  1:7252571/150‑1 (MQ=255)
                                                                           gAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCAGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGaa                                                                          <  2:2765861/150‑1 (MQ=255)
                                                                             aGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAgg                                                                        <  2:4288265/150‑1 (MQ=255)
                                                                               tCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgc                                                                      >  1:6469975/1‑150 (MQ=255)
                                                                                 gACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccg                                                                    >  2:3257175/1‑150 (MQ=255)
                                                                                   ccGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccgcc                                                                  >  2:1089151/1‑150 (MQ=255)
                                                                                   ccGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccgcc                                                                  <  2:2014229/150‑1 (MQ=255)
                                                                                     gAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCggg                                                                                                     <  1:6070069/113‑1 (MQ=255)
                                                                                       tgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGaa                                                                          <  2:7316066‑M1/85‑1 (MQ=255)
                                                                                       tgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcgGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGaa                                                                          >  1:7316066‑M1/54‑138 (MQ=255)
                                                                                        gtgtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCGGGCAagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcgtgccggcgaagggctgcaaagca                                                             <  1:8423220‑M1/150‑85 (MQ=255)
                                                                                        gtgtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCGGGCAagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcgtgccggcgaagggctgcaaagca                                                             <  1:529498‑M1/150‑85 (MQ=255)
                                                                                        gtgtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCg                                                             >  1:3851508/1‑150 (MQ=255)
                                                                                          gtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGc                                                           <  2:9001689/150‑1 (MQ=255)
                                                                                             tATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGcccc                                                        >  2:1922870/1‑150 (MQ=255)
                                                                                             tATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGcccc                                                        >  2:1775012/1‑150 (MQ=255)
                                                                                               tCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCTTGGCGGcccttc                                                      <  2:2254752/150‑4 (MQ=255)
                                                                                                 gCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCTTGGCGGcccttcgc                                                    <  1:2566850/150‑6 (MQ=255)
                                                                                                  ccAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCACGCGGCCCCAGAtt                                                   >  1:7358790/1‑150 (MQ=255)
                                                                                                  ccAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGAtt                                                   >  1:1108438/1‑150 (MQ=255)
                                                                                                   cAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGAttt                                                  >  1:4287980/1‑150 (MQ=255)
                                                                                                   cAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGAttt                                                  <  1:6554317/150‑1 (MQ=255)
                                                                                                                   gggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCtt                                  <  2:5551102/150‑1 (MQ=255)
                                                                                                                   gggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCtt                                  <  1:7568730/150‑1 (MQ=255)
                                                                                                                       cGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGcc                              >  2:8683620/1‑150 (MQ=255)
                                                                                                                        gATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCa                             <  1:1274468/150‑1 (MQ=255)
                                                                                                                         atatTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAGGGGCCGCTTGGCGGcccttcgcg                                                   >  2:5182311/1‑121 (MQ=37)
                                                                                                                              ggggCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAcg                       >  2:4531284/1‑150 (MQ=255)
                                                                                                                                ggCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAcggc                     <  1:7958388/150‑1 (MQ=255)
                                                                                                                                    gcgttGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATGTCTCAGCTGGAACGCTGGGCCAGACACGGCGGCa                 >  2:8114411/4‑150 (MQ=255)
                                                                                                                                      tttGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGa               >  1:4758031/1‑150 (MQ=255)
                                                                                                                                      tttGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGa               <  2:4234041/150‑1 (MQ=255)
                                                                                                                                         gCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATAc            >  2:3093525/1‑150 (MQ=255)
                                                                                                                                             CCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCGGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAcc        <  2:5365515‑M1/150‑1 (MQ=255)
                                                                                                                                              ccTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTtgcccgcgaagggccgcaaagcagccccaatatcgacccgccgcatcacagcttggcgatagacacttcggtcgact       <  1:6204682‑M2/150‑78 (MQ=255)
                                                                                                                                              CCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAccc       <  1:1669676‑M1/150‑1 (MQ=255)
                                                                                                                                               CTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAcccc      >  1:6677017‑M1/1‑150 (MQ=255)
                                                                                                                                               CTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAcccc      >  1:8460135‑M1/1‑150 (MQ=255)
                                                                                                                                                  CGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGa   >  2:8363290‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CGTCACTTCGGTGATTACCACCCGTTCCGTGCGGGAGCTGGAGTTGCAGGTGGGCAGTGAAGTGATTGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGAT  >  NC_002947/295545‑295841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: