Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 311,231 T→C 5.4% T383A (ACC→GCC)  PP_0256 ← putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947311,2310TC 5.4% 901.5 / 23.5 278T383A (ACC→GCC) PP_0256putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (123/139);  new base C (4/11);  total (128/150)
Fisher's exact test for biased strand distribution p-value = 1.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01

Only 100 of 282 total aligned reads displayed.

GCGCTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCAT  >  NC_002947/311082‑311380
                                                                                                                                                     |                                                                                                                                                     
 cgcTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTg                                                                                                                                                      <  2:1184797/150‑1 (MQ=255)
  gcTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGa                                                                                                                                                     >  2:1160248/1‑150 (MQ=255)
  gcTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGa                                                                                                                                                     >  1:286342/1‑150 (MQ=255)
   cTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGAt                                                                                                                                                    <  2:2978004/150‑1 (MQ=255)
   cTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGAt                                                                                                                                                    >  2:2651833/1‑150 (MQ=255)
    tCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATg                                                                                                                                                   >  2:7455783/1‑150 (MQ=255)
    tCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATg                                                                                                                                                   >  2:1877448/1‑150 (MQ=255)
    tCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATg                                                                                                                                                   <  1:8610614/150‑1 (MQ=255)
    tCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATg                                                                                                                                                   <  1:8319604/150‑1 (MQ=255)
     cGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGc                                                                                                                                                  <  1:2274100/150‑1 (MQ=255)
        tGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCa                                                                                                                                               <  1:1095327/150‑1 (MQ=255)
         gATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCAt                                                                                                                                              >  2:6478327/1‑150 (MQ=255)
            gCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGc                                                                                                                                           >  1:2457575/1‑150 (MQ=255)
            gCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGc                                                                                                                                           >  1:1710170/1‑150 (MQ=255)
              ccATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGACTGACGGTGTTGGGTGATGCCCATCGccc                                                                                                                                         >  2:7783499/1‑150 (MQ=255)
               cATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGCGATGGGCATCACCCa                                                                                                                                        <  1:7957098/150‑1 (MQ=255)
               cATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGCGATGGGCATCACCCa                                                                                                                                        <  1:7255242/150‑1 (MQ=255)
                aTGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGCGATGGGCATCACCCaa                                                                                                                                       <  1:1015105/150‑2 (MQ=255)
                 tGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGc                                                                                                                                      <  1:1808257/150‑1 (MQ=255)
                 tGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGc                                                                                                                                      <  1:8485813/150‑1 (MQ=255)
                    tGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAacacc                                                                                                                                   <  2:5606212/150‑2 (MQ=255)
                    tGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGcaca                                                                                                                                   >  1:1329528/1‑150 (MQ=255)
                    tGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGcaca                                                                                                                                   <  1:46431/150‑1 (MQ=255)
                     gCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACAt                                                                                                                                  <  1:7184037/150‑1 (MQ=255)
                       ggTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGa                                                                                                                                <  2:4622182/150‑1 (MQ=255)
                        gTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGAt                                                                                                                               <  1:2664138/150‑1 (MQ=255)
                        gTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGAt                                                                                                                               <  2:6882164/150‑1 (MQ=255)
                         tCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTGCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATc                                                                                                                              <  2:5906680/150‑1 (MQ=255)
                             ccTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGTTGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCacac                                                                                                                          >  2:3087517/1‑150 (MQ=255)
                                  aCGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTg                                                                                                                     >  2:2257897/1‑150 (MQ=255)
                                        cTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTgg                                                                                                               <  2:2215678/150‑1 (MQ=255)
                                        cTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTgg                                                                                                               <  2:8614911/150‑1 (MQ=255)
                                         tgtgGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGc                                                                                                              <  2:311314/150‑1 (MQ=255)
                                         tgtgGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGc                                                                                                              >  2:4544845/1‑150 (MQ=255)
                                         tgtgGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGc                                                                                                              <  2:1256813/150‑1 (MQ=255)
                                              ccACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTAc                                                                                                         >  1:6048324/1‑150 (MQ=255)
                                               cACGCCCCGGGCACAGGCCGGCGCCGGGCACGCCGATGGTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACa                                                                                                        <  2:8518866/150‑1 (MQ=255)
                                                aCGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACAt                                                                                                       >  1:8167635/1‑150 (MQ=255)
                                                aCGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACAt                                                                                                       >  1:6209691/1‑150 (MQ=255)
                                                aCGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACAt                                                                                                       <  1:643322/150‑1 (MQ=255)
                                                aCGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACAt                                                                                                       <  1:3648488/150‑1 (MQ=255)
                                                aCGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACAt                                                                                                       <  2:3805773/150‑1 (MQ=255)
                                                 cGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATg                                                                                                      <  1:2579081/150‑1 (MQ=255)
                                                  gCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATgc                                                                                                     >  1:2979137/1‑150 (MQ=255)
                                                    aCCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATgcgc                                                                                                   <  2:6227888/150‑1 (MQ=255)
                                                     ccGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATgcgcg                                                                                                  >  1:8118461/1‑150 (MQ=255)
                                                        ggCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCgg                                                                                               >  1:5420972/1‑150 (MQ=255)
                                                         gCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGc                                                                                              <  1:6975560/150‑1 (MQ=255)
                                                         gCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGc                                                                                              <  1:2357696/150‑1 (MQ=255)
                                                           acaGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCa                                                                                            >  1:3127710/1‑150 (MQ=255)
                                                             aGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGt                                                                                          >  1:4716579/1‑150 (MQ=255)
                                                              ggCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGtt                                                                                         <  2:7544841/150‑1 (MQ=255)
                                                               gCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTc                                                                                        <  2:775390/150‑1 (MQ=255)
                                                                     gcCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATc                                                                                  >  1:4872532/1‑150 (MQ=255)
                                                                      ccGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCg                                                                                 <  1:5873466/150‑1 (MQ=255)
                                                                      ccGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCg                                                                                 >  1:211893/1‑150 (MQ=255)
                                                                      ccGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCg                                                                                 >  2:7129734/1‑150 (MQ=255)
                                                                            aCGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAg                                                                           <  1:8878121/150‑1 (MQ=255)
                                                                                cGATGGTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCa                                                                       <  2:4870731/150‑1 (MQ=255)
                                                                                  aTGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAgg                                                                     <  2:1374621/150‑1 (MQ=255)
                                                                                  aTGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAgg                                                                     >  1:1698393/1‑150 (MQ=255)
                                                                                        ccACGCAGCATCTGCTGGTTGACGATTTCCTGAATGGTAGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGAc                                                               <  2:8117102/150‑1 (MQ=255)
                                                                                        ccACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGAc                                                               >  2:7974816/1‑150 (MQ=255)
                                                                                             cagcaTCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGc                                                          <  1:3950834/150‑1 (MQ=255)
                                                                                              agcaTCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGcc                                                         <  1:5324358/150‑1 (MQ=255)
                                                                                              agcaTCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGcc                                                         <  2:8815574/150‑1 (MQ=255)
                                                                                               tcaTCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCt                                                        <  1:7321642/149‑1 (MQ=255)
                                                                                               gcaTCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCt                                                        <  1:6485945/150‑1 (MQ=255)
                                                                                                   cTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGAt                                                    <  2:4068949/150‑1 (MQ=255)
                                                                                                     gCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGTCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGAtgt                                                  <  2:6345170/150‑1 (MQ=255)
                                                                                                      cAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGAtgtg                                                 >  1:177874/1‑150 (MQ=255)
                                                                                                      cAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGAtgtg                                                 >  1:5755272/1‑150 (MQ=255)
                                                                                                          ttGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGAc                                             >  1:5444933/1‑150 (MQ=255)
                                                                                                                   tCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGACCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACggcgtg                                    <  1:145838/150‑1 (MQ=255)
                                                                                                                    ccTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACggcgtgg                                   <  1:9093445/150‑1 (MQ=255)
                                                                                                                     cTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACggcgtggc                                  <  1:4411972/150‑1 (MQ=255)
                                                                                                                     cTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACggcgtggc                                  <  1:7063703/150‑1 (MQ=255)
                                                                                                                        actGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTc                               <  2:4721194/148‑1 (MQ=255)
                                                                                                                         aTGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTcc                              <  1:2413459/150‑1 (MQ=255)
                                                                                                                            gTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTccacc                           >  1:3976352/1‑150 (MQ=255)
                                                                                                                             tCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTccacca                          >  2:5368000/1‑150 (MQ=255)
                                                                                                                                gCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACgg                       >  1:1917412/1‑150 (MQ=255)
                                                                                                                                   ccGAATGACGGTGTTGGGTGATGCCGATCGCCCAGCACATGTTCACAGGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACGGTGCCTGGAGGTGCGCCCACGGCGTGGCGTCCACCACGGCCa                    <  2:5465490/150‑1 (MQ=255)
                                                                                                                                   ccGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCa                    <  1:7455783/150‑1 (MQ=255)
                                                                                                                                   ccGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCa                    <  2:1710115/150‑1 (MQ=255)
                                                                                                                                   ccGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGCCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCa                    <  2:2348062/150‑1 (MQ=255)
                                                                                                                                    cGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAg                   >  2:4407980/1‑150 (MQ=255)
                                                                                                                                        tGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAg                   <  2:3590307/146‑1 (MQ=255)
                                                                                                                                        tGACGGGGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTAc               <  2:5876131/150‑1 (MQ=255)
                                                                                                                                          aCGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGAGATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTc             <  2:5528975/150‑1 (MQ=255)
                                                                                                                                           cGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCa            >  2:1938015/1‑150 (MQ=255)
                                                                                                                                             gtgtTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATc          <  2:7295291/150‑1 (MQ=255)
                                                                                                                                                ttGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGAc       <  1:6753212/150‑1 (MQ=255)
                                                                                                                                                ttGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGAc       >  1:5367697/1‑150 (MQ=255)
                                                                                                                                                 tGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACg      >  1:7887050/1‑150 (MQ=255)
                                                                                                                                                 tGGGCGATGGGCATCACCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACg      >  1:6553199/1‑150 (MQ=255)
                                                                                                                                                 tGGGCGATGGGCATCACCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACg      >  2:9163962/1‑150 (MQ=255)
                                                                                                                                                 tGGGCGATGGGCATCACCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACGCATCGACg      >  2:2756860/1‑150 (MQ=255)
                                                                                                                                                     tGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACgccat  >  2:6717919/1‑150 (MQ=255)
                                                                                                                                                     tGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACgccat  >  2:599829/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCGCTCGTTGATGCCCATGGTGCGGTCACCCTGCACGTTGCTGTGGCCACGCACCGGGCACAGGCCGGCGCCGGGCACGCCGATGTTGCCACGCAGCATCTGCAGGTTGACGATTTCCTGAATGGTCGGCACCGAATGACGGTGTTGGGTGATGCCCATCGCCCAGCACATGATCACACGCTTGCCCTGGCAGTACATGCGCGCGGCCAGTTCGATATCGGCCAAGGTCAGGCCGGACTGTGCCTGGATGTGCGACCACGGCGTGGCGTCCACCACGGCCAGGTACTCATCGACGCCAT  >  NC_002947/311082‑311380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: