| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,318,380 | C→T | 5.7% | E230E (GAG→GAA) | ilvC ← | ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,318,380 | 0 | C | T | 5.7% | 889.2 / 27.4 | 280 | E230E (GAG→GAA) | ilvC | ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (132/132); new base T (8/8); total (140/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
CTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGG > NC_002947/5318233‑5318528 | ttCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCg > 2:7502574/1‑150 (MQ=255) ttCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCg > 2:5646204/1‑150 (MQ=255) ttCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCg > 1:7656185/1‑150 (MQ=255) tCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGt > 1:8273016/1‑150 (MQ=255) agagCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGc < 2:49298/150‑1 (MQ=255) tGCGCATGGCCGTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACt < 2:600712/150‑1 (MQ=255) cATGGCCTTGCTGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGaa < 2:4955092/150‑1 (MQ=255) cATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGaa > 1:4416053/1‑150 (MQ=255) cATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGaa < 2:5004345/150‑1 (MQ=255) gCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAg < 2:1292260/150‑1 (MQ=255) gCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAg > 2:1812741/1‑150 (MQ=255) ccTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAgg > 1:7784314/1‑150 (MQ=255) ttGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGcc > 1:8672939/1‑150 (MQ=255) cGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCAtt > 1:4261286/1‑150 (MQ=255) gggATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCAttt > 2:1998172/1‑150 (MQ=255) gATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTcc < 2:5554358/150‑1 (MQ=255) ttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGgcgc > 1:7956670/1‑150 (MQ=255) ttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGgcgc > 1:4191580/1‑150 (MQ=255) ttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGGAGGCCATTTCCGgcgc > 1:6798843/1‑150 (MQ=255) ttGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAg > 2:7112125/1‑150 (MQ=255) gatgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGcc > 1:7504123/1‑150 (MQ=255) atgaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCa > 1:5060517/1‑150 (MQ=255) gaCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGc > 1:2079098/1‑150 (MQ=255) atgcgcGGACCAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCt > 1:136809/6‑150 (MQ=255) atgcgcGGACCAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCt > 1:2603546/6‑150 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc < 2:4416053/150‑1 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc > 1:2829125/1‑150 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc > 2:848207/1‑150 (MQ=255) ggaccAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGAcc > 1:4378650/4‑150 (MQ=255) ggCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCa < 1:1010501/150‑1 (MQ=255) ccAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAga < 2:3445205/150‑2 (MQ=255) cAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAgaa > 1:8392220/1‑148 (MQ=255) tGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGttt < 2:8078930/150‑1 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 2:2315458/150‑1 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 1:2227675/150‑1 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 2:6648517/150‑1 (MQ=255) aCTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAAc > 1:5298240/1‑150 (MQ=255) aCTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAAc < 1:6258270/150‑1 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 2:3870214/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 1:8951236/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 2:9042970/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 1:7452911/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 1:6455456/1‑150 (MQ=255) gTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCttt < 1:5481467/150‑1 (MQ=255) gTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCttt > 1:2432984/1‑150 (MQ=255) aTTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGa < 2:891164/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 1:4504386/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc > 2:6988497/1‑150 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc > 1:151591/1‑150 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 2:7784314/150‑1 (MQ=255) tCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTGTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAcc > 2:2259775/1‑150 (MQ=255) gCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGc < 2:8342513/150‑1 (MQ=255) cGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCt < 2:2670971/150‑1 (MQ=255) gttgttGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTc > 2:4281457/1‑150 (MQ=255) gttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGAc < 1:3689195/150‑1 (MQ=255) gttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGAc < 2:7861421/150‑1 (MQ=255) ggAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGt < 1:1615930/150‑1 (MQ=255) agaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTAc < 2:7313811/150‑1 (MQ=255) gAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCca > 1:7354402/1‑150 (MQ=255) gtagtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCcaca < 2:7653961/150‑1 (MQ=255) gtTCATGTTGGCGATGCCGCCTTCGAACAACAGCACAACGAACAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAg > 1:3404231/1‑150 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGaa < 1:2520343/150‑1 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGaa < 2:2810526/150‑1 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGaa > 1:4080810/1‑150 (MQ=255) cATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAAc < 1:7248890/150‑1 (MQ=255) tGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCt < 1:5986538/150‑1 (MQ=255) tGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCt > 2:5152092/1‑150 (MQ=255) ggCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTg > 2:8755083/1‑150 (MQ=255) gATGCCGCCTACGTAAATGAGTAAAACGAACAGCTACAGCACGTGCAGCCACTCGAAGAAGCCCATTACCGGCGCTTAGCCAGCTTCGACCAGGGTTTCGAAACCGCCTTTGACCAGCACGACGGAACCGCCACACAGAACAGCATgaac > 2:6578671/1‑147 (MQ=255) aTGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCa > 2:4543161/1‑150 (MQ=255) cTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACa > 2:3172296/1‑150 (MQ=255) ttCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAg < 1:7093324/150‑1 (MQ=255) tcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagttt > 1:4897094/3‑150 (MQ=255) tGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggttt < 1:559211/150‑1 (MQ=255) tGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggttt < 1:37451/150‑1 (MQ=255) gAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttc > 2:4370708/1‑150 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 1:4782793/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:6773975/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg > 2:3757459/1‑150 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:2133281/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 1:9079636/150‑1 (MQ=255) ggTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcgg < 1:7000848/150‑1 (MQ=255) tCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggtt < 1:3004278/150‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc > 1:9109042/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc > 2:635594/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc < 2:8379725/150‑1 (MQ=255) aCGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGgtttcggtttcg < 1:5646204/150‑1 (MQ=255) aTCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTcc < 1:539795/150‑1 (MQ=255) tcagcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCt < 1:1722540/150‑1 (MQ=255) cttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAGCCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGaa < 2:4127816/150‑1 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:7885992/1‑150 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:8584347/1‑150 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:2458588/1‑150 (MQ=255) tcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAgg > 2:6215885/1‑150 (MQ=255) tcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAgg < 1:356202/150‑1 (MQ=255) cagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggt < 1:6347232/150‑1 (MQ=255) agctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtg < 2:8609743/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:1440330/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg > 1:4674151/1‑150 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTGTCGGGTTCGTCCGTGAAggtgg > 2:639131/1‑150 (MQ=255) | CTTCAGAGCATTGCGCATGGCCTTGCGGGATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGG > NC_002947/5318233‑5318528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |