| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,318,410 | C→T | 10.4% | P220P (CCG→CCA) | ilvC ← | ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,318,410 | 0 | C | T | 10.4% | 920.7 / 72.1 | 326 | P220P (CCG→CCA) | ilvC | ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (145/147); new base T (18/16); total (163/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 331 total aligned reads displayed.
GATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTAC > NC_002947/5318261‑5318559 | ttcGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGgcgc > 1:4191580/1‑150 (MQ=255) gTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTa < 1:1265831/150‑1 (MQ=255) gTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTa < 2:7626843/150‑1 (MQ=255) atgcgcGGACCAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCt > 1:2603546/6‑150 (MQ=255) aCTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCt > 2:2019232/1‑150 (MQ=255) ttCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTc > 1:2829125/1‑150 (MQ=255) ggaccAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCTCTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGAcc < 2:1590722/147‑1 (MQ=255) ggCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCa < 1:1010501/150‑1 (MQ=255) ggCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCa > 2:3797744/1‑150 (MQ=255) ggCCAGTGACGTACTCACAGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCa < 2:6873933/150‑1 (MQ=255) gCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGGCTTCGTAGATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGTCCATTTCCGGCGCGTAGCCAGCTTCGACCAg < 1:2313064/150‑1 (MQ=255) accAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAg < 2:6315817/149‑1 (MQ=255) cAGTGACGTATTCGCCCCACTCAGCAGTGTTGGAGATCGAGTAGTTCATGTTCGCAATGCCGCCTTCATAGATCAGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAgaa > 1:8392220/1‑148 (MQ=255) gTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGAGCGTAGCCAGCTTCGACCAGGGtt > 2:8722061/1‑150 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 1:2227675/150‑1 (MQ=255) gACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 2:2315458/150‑1 (MQ=255) gACGTACTCACCGTAGTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTc < 2:8983770/150‑1 (MQ=255) tACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGaaa < 1:7011968/150‑1 (MQ=255) tCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCg > 2:1853530/1‑150 (MQ=255) tCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCg > 1:7313811/1‑150 (MQ=255) tCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCg > 2:6674479/1‑150 (MQ=255) aCCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGc > 1:8951260/1‑150 (MQ=255) cGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCtt < 1:4370510/150‑1 (MQ=255) gTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCttt < 1:5481467/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 2:7956670/150‑1 (MQ=255) ttCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAc < 1:5333286/150‑1 (MQ=255) tCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTGTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGAcc > 2:2259775/1‑150 (MQ=255) cGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCa < 1:7619503/150‑1 (MQ=255) ggCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAg > 1:3460187/1‑150 (MQ=255) cGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCt < 2:2670971/150‑1 (MQ=255) gttgttGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTc > 2:5635820/1‑150 (MQ=255) gttgttGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTc > 2:7086217/1‑150 (MQ=255) ttgttgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCg > 1:1509390/1‑150 (MQ=255) tgGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACgg < 2:4441732/150‑1 (MQ=255) gagaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTa < 2:6002446/150‑1 (MQ=255) agaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTAc > 2:1391448/1‑150 (MQ=255) agaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTAc < 2:7313811/150‑1 (MQ=255) agaTCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTAc < 1:2517038/150‑1 (MQ=255) gtagtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCcaca < 1:6602046/150‑1 (MQ=255) tagtTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCcacac > 2:6582081/1‑150 (MQ=255) gtccATGTTGGCGATGCCGCCTTCGCACACGAGGTCTACCAACAGCTTCAGCTCCTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCATCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGGACCGCCACACAg < 1:5176122/147‑1 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGaa < 2:2810526/150‑1 (MQ=255) tCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGaa < 1:639140/150‑1 (MQ=255) gTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGc < 2:7767819/150‑1 (MQ=255) tGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCt > 2:5152092/1‑150 (MQ=255) tGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCt < 1:4515936/150‑1 (MQ=255) gATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTc > 1:243797/1‑150 (MQ=255) aTGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCa > 2:8819239/1‑150 (MQ=255) cgccTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTACCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTAGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGa > 2:4346410/1‑150 (MQ=255) ccTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAAc < 1:7818221/150‑1 (MQ=255) cTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACa > 2:4782793/1‑150 (MQ=255) gtagctGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCAGTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCCGGGTTTAGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACTGAACATCCTGCTCACCGAACAGGtc < 1:561857/145‑1 (MQ=255) gatcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagt < 2:3309717/146‑1 (MQ=255) tcaGGTCTACGATGAGCTTCATTTCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGtcagttt > 1:4897094/3‑150 (MQ=255) tGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggttt < 1:37451/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 1:4422347/150‑1 (MQ=255) aGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcg < 2:2133281/150‑1 (MQ=255) tCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGtcggtttcggtt < 1:3004278/150‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc > 1:9109042/1‑150 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc < 2:8379725/150‑1 (MQ=255) tACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCggtttcggtttc < 2:3701995/150‑1 (MQ=255) aCGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGgtttcggtttcg < 1:7502745/150‑1 (MQ=255) gATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTc < 2:3967735/150‑1 (MQ=255) aTCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTcc < 2:4977647/150‑1 (MQ=255) aTCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTcc < 1:8711652/150‑1 (MQ=255) aTCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTcc < 1:4709441/150‑1 (MQ=255) tcagcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCt > 1:3822611/1‑150 (MQ=255) tcagcttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCt < 1:1722540/150‑1 (MQ=255) gcttcatttCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGa < 2:6194920/150‑1 (MQ=255) cttcatttCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGaa > 1:1565146/1‑150 (MQ=255) cttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAGCCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGaa < 2:4127816/150‑1 (MQ=255) cttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGaa > 1:6824613/1‑150 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:8584347/1‑150 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:7885992/1‑150 (MQ=255) ttcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAg > 1:556913/1‑150 (MQ=255) ttcagctCGAGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGCTTTCGAAACCGGCTTTGACCAGCACGACGGTACCGCCACCCAGAACAGCCTGCTCACCGAACAGGTCGGCATCGCTTTCGTCCTTGAAg < 2:4406858/150‑1 (MQ=255) tcagctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAgg < 1:356956/150‑1 (MQ=255) tttCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAggtgg > 1:5071197/3‑150 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAggtgg < 2:1440330/150‑1 (MQ=255) gctCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTGTCGGGTTCGTCCGTGAAggtgg > 2:639131/1‑150 (MQ=255) tCGTGCAGGCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAGGTGGtt < 2:8095905/150‑1 (MQ=255) cGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGttt < 2:6281361/150‑1 (MQ=255) cAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCgat > 1:2081808/1‑150 (MQ=255) cAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCgat < 2:8273016/150‑1 (MQ=255) cAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCgat < 1:7430886/150‑1 (MQ=255) ggCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAGGTGGTTTCaataa > 1:7151505/1‑148 (MQ=255) ggCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAGGTGGTTTCaataa > 1:334862/1‑148 (MQ=255) gCACTCGAAGTAAGCCATTTCTGGTGCGTAACCAGCTTCGACCAGAACTTCAAAACCTGTGCGAATGAGTTCAACAACGCCACCGCAAAGAACAGCCTGCTCACCGAACAGGTCAGTTTCGCACTCTTCCTTGAAGGTGGTTTCaataac > 1:3932485/1‑147 (MQ=255) aCTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATAc > 2:3429521/1‑150 (MQ=255) tCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCg > 2:1189638/1‑150 (MQ=255) tCGAAGTAGGCCATTTCCGGCGCGTACCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCg > 2:4226541/1‑150 (MQ=255) gAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGt > 1:1923328/1‑150 (MQ=255) gTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACg > 1:5888729/1‑150 (MQ=255) tAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACgg > 2:8421947/1‑150 (MQ=255) ggCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGcc > 1:8523538/1‑150 (MQ=255) aTTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccacca < 1:8755083/150‑1 (MQ=255) aTTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGccacca > 1:6195373/1‑150 (MQ=255) ttCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCaccacc < 1:4602976/150‑1 (MQ=255) ccGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTa > 2:7497892/1‑150 (MQ=255) cGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTAc > 2:300555/1‑150 (MQ=255) | GATTCTTCGTTGATGACTTCCGGGCCAGTGACGTACTCACCGTATTCGGCGTTGTTGGAGATCGAGTAGTTCATGTTGGCGATGCCGCCTTCGTACATGAGGTCTACGATCAGCTTCAGCTCGTGCAGGCACTCGAAGTAGGCCATTTCCGGCGCGTAGCCAGCTTCGACCAGGGTTTCGAAACCGGCTTTGACCAGCTCGACGGTACCGCCACACAGAACAGCCTGCTCACCGAACAGGTCGGTTTCGGTTTCGTCCTTGAAGGTGGTTTCGATGATACCGGTACGGCCACCACCTAC > NC_002947/5318261‑5318559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |