Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,348,920 T→G 8.8% D124E (GAT→GAG)  PP_4703 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,348,9200TG 8.8% 900.7 / 20.4 293D124E (GAT→GAG) PP_4703hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (212/48);  new base G (2/30);  total (214/79)
Fisher's exact test for biased strand distribution p-value = 1.56e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 300 total aligned reads displayed.

CACTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAACGAAATCGCCCTGA  >  NC_002947/5348771‑5349068
                                                                                                                                                      |                                                                                                                                                    
cACTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGAt                                                                                                                                                      <  2:4768134/150‑1 (MQ=255)
cACTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGAt                                                                                                                                                      <  2:5476850/150‑1 (MQ=255)
cACTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGAt                                                                                                                                                      <  1:3856036/150‑1 (MQ=255)
  cTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATgg                                                                                                                                                    <  2:5016446/150‑1 (MQ=255)
   tCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgc                                                                                                                                                   >  1:8739491/1‑150 (MQ=255)
   tCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgc                                                                                                                                                   >  2:6782380/1‑150 (MQ=255)
   tCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgc                                                                                                                                                   >  2:6699744/1‑150 (MQ=255)
   tCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgc                                                                                                                                                   >  1:2714155/1‑150 (MQ=255)
   tCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgc                                                                                                                                                   >  2:5827645/1‑150 (MQ=255)
    ccAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgcc                                                                                                                                                  <  1:4930127/150‑1 (MQ=255)
     cAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgccg                                                                                                                                                 >  1:1018539/1‑150 (MQ=255)
       aCTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgccgcc                                                                                                                                               <  2:9055989/150‑1 (MQ=255)
       aCTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGgccgcc                                                                                                                                               <  2:8586783/150‑1 (MQ=255)
        cTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGccc                                                                                                                                              <  2:6610892/150‑1 (MQ=255)
         tttCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCt                                                                                                                                             >  1:6898325/1‑150 (MQ=255)
         tttCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCt                                                                                                                                             <  1:1974950/150‑1 (MQ=255)
          ttCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCtt                                                                                                                                            <  1:132028/150‑1 (MQ=255)
           tCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTa                                                                                                                                           <  1:3671134/150‑1 (MQ=255)
            cGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCGCTTAt                                                                                                                                          <  2:3280493/150‑1 (MQ=255)
              tGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGc                                                                                                                                        <  1:7075499/150‑1 (MQ=255)
                   aCCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCa                                                                                                                                   <  1:8408971/150‑1 (MQ=255)
                   aCCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTAGTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCa                                                                                                                                   <  1:4048483/150‑1 (MQ=255)
                        cTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGAc                                                                                                                              >  1:2004919/1‑150 (MQ=255)
                        cTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGAc                                                                                                                              >  1:6371103/1‑150 (MQ=255)
                           ggCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCGTCGGCGCCACGGGCGATGCCGAGTGGCTTATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCg                                                                                                                           >  1:7639401/1‑150 (MQ=255)
                             ccGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCCCTCTGCG‑CCTGCCGGTCACCGGCGCTGCGCCCGAGGGCCGCCCGTATGCGGGCAGCGGCCCggg                                                                                                                         >  2:8530667/1‑149 (MQ=255)
                             ccGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGa                                                                                                                         >  1:5389604/1‑150 (MQ=255)
                                ggggccccgcACCAGCCAGATAAGTCCCGGCACCACCTCGGGCGCCTGGGGCTTTGCTGTGTGGCTTATCTAAAACGTCCCAACT‑TTCACCCGGCGGGGCCCGGCCACGCCACCCGTGGGCCGCCGTTCTGCGGCCAGCGACCCGGATCt                                                                                                                      <  2:3983928/144‑1 (MQ=255)
                                 ttGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTg                                                                                                                     >  2:5861798/1‑150 (MQ=255)
                                 ttGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTg                                                                                                                     >  2:7330109/1‑150 (MQ=255)
                                   gcgcCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGGCCTTATGCGGCCAGCGACCCGGATCTGtt                                                                                                                   <  2:1830645/150‑1 (MQ=255)
                                   gcgcCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGtt                                                                                                                   >  1:5045794/1‑150 (MQ=255)
                                            cagccagTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGt                                                                                                          >  1:7947123/1‑150 (MQ=255)
                                              gccagTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGc                                                                                                        >  1:1743991/1‑150 (MQ=255)
                                               ccagTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCa                                                                                                       >  1:4226346/1‑150 (MQ=255)
                                               ccagTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCa                                                                                                       >  1:5835382/1‑150 (MQ=255)
                                               ccagTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCa                                                                                                       >  1:8638358/1‑150 (MQ=255)
                                                 agTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATg                                                                                                     >  1:2607035/1‑150 (MQ=255)
                                                      aTTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCg                                                                                                >  1:3139992/1‑150 (MQ=255)
                                                       tttCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGCTCTGTTGACCTGGGTGCATGTAGCgg                                                                                               >  2:8850470/1‑150 (MQ=255)
                                                       tttCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCgg                                                                                               >  2:9076556/1‑150 (MQ=255)
                                                       tttCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCgg                                                                                               >  1:2307846/1‑150 (MQ=255)
                                                       tttCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCgg                                                                                               >  1:2366443/1‑150 (MQ=255)
                                                       tttCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCgg                                                                                               >  2:3801269/1‑150 (MQ=255)
                                                       tttCCGCCCCCCCGTTGGGCGCCAGGGGGTATGCGGTTTGTCTTATCTACAATGTGCGCACTATTCC‑CGTGCCGGTCCCGGGAACTGACCCCGTTGGCCGCATTTTTCGGCCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCgg                                                                                               <  2:4180679/150‑1 (MQ=255)
                                                             gCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCa                                                                                         >  1:4829349/1‑150 (MQ=255)
                                                              ccccaccGCCGGCGCCACGGGCGATGCGGCGTGGCTGTTCGACAACGGGCGCACTAGTCC‑CCTGCCGGGCACCGGCACTGCACCCGTGGGCCGCCCTAATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAg                                                                                        <  2:8236477/148‑1 (MQ=255)
                                                                ccaccGTCGGCGCCCGGGGCCAGGCGGTGGGGCTGATCCACACCGGGCCCACTATCCA‑CCGCCGGGACCCCGGCCCGCCACCCGCGGGCCCCCCTTAGGCGCCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGcc                                                                                      <  2:2538733/150‑1 (MQ=255)
                                                                 caccTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCg                                                                                     >  1:4174258/1‑150 (MQ=255)
                                                                 caccTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCg                                                                                     >  1:5745937/1‑150 (MQ=255)
                                                                  accTTCGGCGCCACGGGCGATGCCGAGTGGTTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGt                                                                                    >  2:5534648/1‑150 (MQ=255)
                                                                  accTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGt                                                                                    >  2:4321549/1‑150 (MQ=255)
                                                                  accTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGt                                                                                    >  1:7373764/1‑150 (MQ=255)
                                                                    cTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGttt                                                                                  >  2:7054157/1‑150 (MQ=255)
                                                                     ttCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTc                                                                                 >  2:7577602/1‑150 (MQ=255)
                                                                       cGGCGCCACGGGCGATGCCGAGTGGCTGACCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCt                                                                               <  2:7488759/150‑1 (MQ=255)
                                                                         gcgcCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCGCCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCg                                                                             >  2:2413770/1‑150 (MQ=255)
                                                                             cACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGc                                                                         >  1:6511282/1‑150 (MQ=255)
                                                                                   cGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTAGGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCt                                                                   >  2:708401/1‑150 (MQ=255)
                                                                                         cGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTa                                                             >  1:2446683/1‑150 (MQ=255)
                                                                                          gAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTAc                                                            >  1:6874827/1‑150 (MQ=255)
                                                                                          gAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTAc                                                            >  2:7448467/1‑150 (MQ=255)
                                                                                             tGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGc                                                         >  2:2092085/1‑150 (MQ=255)
                                                                                               gCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCaa                                                       >  2:1294483/1‑150 (MQ=255)
                                                                                                 tGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGTCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAAcc                                                     >  2:6571703/1‑150 (MQ=255)
                                                                                                 tGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGTCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAAcc                                                     >  2:5530946/1‑150 (MQ=255)
                                                                                                 tGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAAcc                                                     >  1:4270280/1‑150 (MQ=255)
                                                                                                   aTCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTTCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCa                                                   >  2:4376250/1‑150 (MQ=255)
                                                                                                      gaaaatgTGCGCACTATCCA‑CCTGCTGGTCACCGCCACTGCACCCGATGGCCGCCCTTTTGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGc                                                <  2:3195194/144‑1 (MQ=255)
                                                                                                      gACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGc                                                >  1:6214101/1‑150 (MQ=255)
                                                                                                      gACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGc                                                >  1:8049576/1‑150 (MQ=255)
                                                                                                        cAACGTGCGCACTTTTCC‑CCTGCTGGCCACCGCCACTGCACCCGCGGGCCGCCATTCGGCGCCCCGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCt                                              <  1:7355050/150‑1 (MQ=255)
                                                                                                        cAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCt                                              >  1:8569446/1‑150 (MQ=255)
                                                                                                        aaatgTGCGCACTTTTCA‑CCTGCAGGTCACGGGAACTGCACCCGTTGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCt                                              <  2:5148805/146‑1 (MQ=255)
                                                                                                         aatgTGCCCACTTTCCA‑CCGGCTGGTCACCGGCCCTCCACCCGAGGGCCGCCCTTAGGCGGCCCGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTg                                             <  2:7658544/147‑1 (MQ=255)
                                                                                                             tGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCAc                                         >  1:7805038/1‑150 (MQ=255)
                                                                                                               cgcACTTTTCA‑CCTGCCGGTCACCGGCACTGCACCCGAGGGCCGCCCTTAGGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCAcgc                                       <  2:2015603/150‑1 (MQ=255)
                                                                                                                 cACTATTCA‑CCTGCCGGTCACGGGCACTGCACCCGTTGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACgcgc                                     <  2:5319871/150‑1 (MQ=255)
                                                                                                                  aCTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGcc                                    >  1:892314/1‑150 (MQ=255)
                                                                                                                      ttCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGc                                >  2:6360754/1‑150 (MQ=255)
                                                                                                                        cA‑CCTGCCGGTCACCGGCACTGCACCCGCGGGCCGCCCTTAGGCGCCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAg                              <  1:6706121/150‑1 (MQ=255)
                                                                                                                         ccccTGCCGGCCCCCGGCACGGCACCCGCGGGCCGCCCTTAGGCGCCCCGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAg                              <  2:7792562/148‑1 (MQ=255)
                                                                                                                             tGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATg                          >  1:280408/1‑150 (MQ=255)
                                                                                                                              gccggccACCGGCACTGCACCCGCGGGCCGCCCTTCTGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGc                         <  2:7181128/144‑1 (MQ=255)
                                                                                                                              gCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGc                         >  2:3572313/1‑150 (MQ=255)
                                                                                                                              gCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGc                         >  1:3465070/1‑150 (MQ=255)
                                                                                                                              gCAGGCCCCCGGCACTGCACCCGCTGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGc                         <  1:7492261/150‑1 (MQ=255)
                                                                                                                                aGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCt                       >  2:5909321/1‑150 (MQ=255)
                                                                                                                                   tccccGGCACTGCCCCCGTGGGCCGCCCTTAGGGGCCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTAtt                    <  2:6185648/147‑1 (MQ=255)
                                                                                                                                   gcccgggCACTGCACCGGTGGGCCGCCATTTGGCGGCAAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTAtt                    <  2:6885483/145‑1 (MQ=255)
                                                                                                                                   gccccGGCACTGCACCCGTTGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTAtt                    <  2:5748437/147‑1 (MQ=255)
                                                                                                                                     aCCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTAc                  >  2:3389610/1‑150 (MQ=255)
                                                                                                                                     aCCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTAc                  >  1:1422523/1‑150 (MQ=255)
                                                                                                                                      ccGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACa                 >  2:6428777/1‑150 (MQ=255)
                                                                                                                                        gccACTGCCCCCGAGGGCCGCCATTAGGCGCCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAAc               <  1:7160029/148‑1 (MQ=255)
                                                                                                                                             tGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTTACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTAAAACGAAAt          >  1:775093/1‑150 (MQ=255)
                                                                                                                                                  ccGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGTAGGATGCCTATTACAACGAAATCGccc     >  2:1526980/1‑150 (MQ=255)
                                                                                                                                                  ccGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAACGAAATCGccc     >  2:1129547/1‑150 (MQ=255)
                                                                                                                                                  ccGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAACGAAATCGccc     >  2:8324821/1‑150 (MQ=255)
                                                                                                                                                     aTGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAACGAAATCGCCCTGa  >  2:8521898/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CACTCCAACTTTCGTGAAGACCTGCTCGGCCGCTTGCGCCGCACCAGCCAGTTCATTTCCGGCACCACCTTCGGCGCCACGGGCGATGCCGAGTGGCTGATCGACAAAGTGCGCACTATTCA‑CCTGCAGGTCACCGGCACTGCACCCGATGGCCGCCCTTATGCGGCCAGCGACCCGGATCTGTTGACCTGGGTGCATGTAGCGGAGGTCAGCCGTTTCCTCGCTGCCCACCTGCGTTACCGCAACCCACGCCTGCCACGCGCCGAGCAGGATGCCTATTACAACGAAATCGCCCTGA  >  NC_002947/5348771‑5349068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑