Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,355,909 A→T 5.3% S60T (TCG→ACG) ‡ pnp ← polyribonucleotide nucleotidyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,355,9090AT 5.3% 1036.2 / 30.5 303S60T (TCG→ACG) ‡pnppolyribonucleotide nucleotidyltransferase
Reads supporting (aligned to +/- strand):  ref base A (147/140);  new base T (12/4);  total (159/144)
Fisher's exact test for biased strand distribution p-value = 7.48e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 309 total aligned reads displayed.

GTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGACCGA  >  NC_002947/5355760‑5356058
                                                                                                                                                     |                                                                                                                                                     
  tCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACa                                                                                                                                                     >  1:3796374/1‑150 (MQ=255)
     tGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCg                                                                                                                                                  >  2:7601710/1‑150 (MQ=255)
      gAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCgg                                                                                                                                                 <  1:1184685/150‑1 (MQ=255)
         gCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaa                                                                                                                                              <  2:2423741/150‑1 (MQ=255)
         gCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaa                                                                                                                                              >  2:6432316/1‑150 (MQ=255)
            ttCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGgaagaa                                                                                                                                           >  2:7155750/1‑150 (MQ=255)
            atcaacgAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGgaagaa                                                                                                                                           >  1:6044059/7‑150 (MQ=255)
            atcaacgAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGgaagaa                                                                                                                                           >  2:2869845/7‑150 (MQ=255)
             tCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGaaa                                                                                                                                          <  1:5603894/150‑1 (MQ=255)
               cGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAcc                                                                                                                                        <  2:4197451/150‑1 (MQ=255)
                gggAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAccc                                                                                                                                       <  2:3789633/150‑1 (MQ=255)
                gggAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAAccc                                                                                                                                       <  2:3744368/150‑1 (MQ=255)
                 ggAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCt                                                                                                                                      >  2:6613888/1‑150 (MQ=255)
                 cgAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCt                                                                                                                                      >  2:945219/2‑150 (MQ=255)
                  gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt                                                                                                                                     <  1:3341256/150‑1 (MQ=255)
                  gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt                                                                                                                                     >  2:6729345/1‑150 (MQ=255)
                  gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt                                                                                                                                     <  1:6508774/150‑1 (MQ=255)
                  gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt                                                                                                                                     <  1:7978426/150‑1 (MQ=255)
                  gAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACATGGGATCTTGCCAGCGGCGTATGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCtt                                                                                                                                     <  1:7917075/150‑1 (MQ=255)
                  gAAAAGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCtg                                                                                                                                     >  1:6340477/1‑149 (MQ=255)
                    aCAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGc                                                                                                                                   <  1:6168060/150‑1 (MQ=255)
                    aCAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGc                                                                                                                                   <  1:3878880/150‑1 (MQ=255)
                    aCAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGc                                                                                                                                   <  2:2740444/150‑1 (MQ=255)
                     aaGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCtgacc                                                                                                                                  >  2:7831803/2‑146 (MQ=255)
                      aGCGGGCGGATCGGACGGTCGATCAGGCGCGAAACCAGAGTTTCGTTTTCGCTTGGACGACCTTCGCGCTTGAAGAAACCACCTGGGATCTTGCCAGCTGCGTAAGTCTTTTCCTGATAGTTGACGGTCAGCGGGAAGAAATCCtgaccc                                                                                                                                 <  1:8777337/150‑6 (MQ=255)
                       gCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTg                                                                                                                                >  2:6137488/1‑150 (MQ=255)
                            cggaTCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCa                                                                                                                           <  1:7255422/150‑1 (MQ=255)
                                tCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCt                                                                                                                       >  1:6139457/1‑150 (MQ=255)
                                 cGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTg                                                                                                                      <  2:5653029/150‑1 (MQ=255)
                                   gACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGtt                                                                                                                    <  1:8249627/150‑1 (MQ=255)
                                     cGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTg                                                                                                                  >  1:7347758/1‑150 (MQ=255)
                                      ggTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTgg                                                                                                                 >  2:5321758/1‑150 (MQ=255)
                                      ggTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTgg                                                                                                                 >  2:2520882/1‑150 (MQ=255)
                                          gATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGcc                                                                                                             >  1:1821366/1‑150 (MQ=255)
                                             cAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTAc                                                                                                          <  1:5206439/150‑1 (MQ=255)
                                                gcgcGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcac                                                                                                       >  2:5193928/1‑150 (MQ=255)
                                                 cgcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcaca                                                                                                      <  2:8416016/150‑1 (MQ=255)
                                                 cgcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACcaca                                                                                                      <  2:8058596/150‑1 (MQ=255)
                                                  gcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAg                                                                                                     >  1:3082324/1‑150 (MQ=255)
                                                  gcgAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAg                                                                                                     >  2:8618063/1‑150 (MQ=255)
                                                      ggTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCAc                                                                                                 >  1:8894330/1‑150 (MQ=255)
                                                             gTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACg                                                                                          <  1:5876007/150‑1 (MQ=255)
                                                              tctcTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACgg                                                                                         >  1:4992296/1‑150 (MQ=255)
                                                               ctctTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGt                                                                                        <  2:2675911/150‑1 (MQ=255)
                                                                tctTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTg                                                                                       >  2:125456/1‑150 (MQ=255)
                                                                  tttCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAc                                                                                     >  2:6972377/1‑150 (MQ=255)
                                                                  tttCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAc                                                                                     >  1:4884137/1‑150 (MQ=255)
                                                                     ctcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGATACGCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgtg                                                                                  >  2:2246122/1‑149 (MQ=255)
                                                                      tcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGAcgtcg                                                                                 >  1:8534715/1‑150 (MQ=255)
                                                                      tcGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTAGCGCCTACCACAGTCACCAGCACGGTGAcgtcg                                                                                 >  1:6432841/1‑150 (MQ=255)
                                                                        ggAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGtt                                                                               >  1:5706680/1‑150 (MQ=255)
                                                                          aaGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGt                                                                             >  2:1069885/1‑150 (MQ=255)
                                                                            ggACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCg                                                                           <  1:2724736/150‑1 (MQ=255)
                                                                             gACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGa                                                                          >  2:7425177/1‑150 (MQ=255)
                                                                                 gCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGt                                                                      >  1:6348996/1‑150 (MQ=255)
                                                                                  ccTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTa                                                                     >  1:3572003/1‑150 (MQ=255)
                                                                                   cTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTaa                                                                    >  2:6504307/1‑150 (MQ=255)
                                                                                    ttCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAAc                                                                   >  2:5626253/1‑150 (MQ=255)
                                                                                    ttCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAAc                                                                   >  1:1082045/1‑150 (MQ=255)
                                                                                      cACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCa                                                                 >  2:5410850/1‑150 (MQ=255)
                                                                                         gCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCa                                                              >  2:6130523/1‑150 (MQ=255)
                                                                                         gCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCa                                                              >  1:1738041/1‑150 (MQ=255)
                                                                                           ttGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACg                                                            >  2:7565020/1‑150 (MQ=255)
                                                                                           ttGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACg                                                            >  1:9062673/1‑150 (MQ=255)
                                                                                               agaagCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGgcgc                                                        >  2:3009906/1‑150 (MQ=255)
                                                                                               agaagCCACCTGGGATCTTGCCAGCGGCGTAGGTCCTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGgcgc                                                        <  2:3629477/150‑1 (MQ=255)
                                                                                                 aagCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCg                                                      >  2:1383512/1‑150 (MQ=255)
                                                                                                       ccTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGcc                                                <  1:4903940/150‑1 (MQ=255)
                                                                                                       ccTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGcc                                                >  1:2102610/1‑150 (MQ=255)
                                                                                                        cTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCt                                               <  1:4511862/150‑1 (MQ=255)
                                                                                                         tGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTg                                              >  1:8028886/1‑150 (MQ=255)
                                                                                                            gATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACg                                           <  1:8385192/150‑1 (MQ=255)
                                                                                                               cTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGc                                        >  1:3990139/1‑150 (MQ=255)
                                                                                                                ttGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCa                                       >  1:6740624/1‑150 (MQ=255)
                                                                                                                 tGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCaa                                      <  1:419389/150‑1 (MQ=255)
                                                                                                                      gcggcgTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACgg                                 >  2:599627/1‑150 (MQ=255)
                                                                                                                       cggcgTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGc                                >  1:7097562/1‑150 (MQ=255)
                                                                                                                         gcgTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGccc                              <  2:201504/150‑1 (MQ=255)
                                                                                                                             acgTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGttt                          >  2:8118475/3‑150 (MQ=255)
                                                                                                                                tCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCga                       <  2:332867/150‑1 (MQ=255)
                                                                                                                                  ttttCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCgaga                     >  2:5079807/1‑150 (MQ=255)
                                                                                                                                    ttCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGt                   >  2:6275190/1‑150 (MQ=255)
                                                                                                                                     tCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTg                  <  2:1975241/150‑1 (MQ=255)
                                                                                                                                      ccTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGa                 <  1:7455989/150‑1 (MQ=255)
                                                                                                                                        tGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACg               >  2:3176498/1‑150 (MQ=255)
                                                                                                                                        tGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACg               >  1:77973/1‑150 (MQ=255)
                                                                                                                                        tGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACg               >  2:7525777/1‑150 (MQ=255)
                                                                                                                                          gTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGt             >  2:6076297/1‑150 (MQ=255)
                                                                                                                                          gTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGt             >  1:1538846/1‑150 (MQ=255)
                                                                                                                                             gTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGa          >  2:1689421/1‑150 (MQ=255)
                                                                                                                                             gTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGa          <  1:2969729/150‑1 (MQ=255)
                                                                                                                                              tGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGAt         >  1:6673611/1‑150 (MQ=255)
                                                                                                                                              tGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGAt         <  1:7809877/150‑1 (MQ=255)
                                                                                                                                               gAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGAtt        <  1:2520882/150‑1 (MQ=255)
                                                                                                                                               gAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGAtt        >  2:4751110/1‑150 (MQ=255)
                                                                                                                                               gAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGAtt        <  1:6892953/150‑1 (MQ=255)
                                                                                                                                                  ccGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGAc     <  1:1069711/150‑1 (MQ=255)
                                                                                                                                                  ccGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGAc     >  2:4434194/1‑150 (MQ=255)
                                                                                                                                                   cGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGAcc    <  2:898680/150‑1 (MQ=255)
                                                                                                                                                     aCAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGACCGa  >  2:3686144/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTTCATGAAGCCTTCCGGGAACAGCGGACGGATCGGACGGTCGATCAGGCGCGAGGTCAGCGTCTCTTTCTCGGAAGGACGGCCTTCACGCTTGAAGAAGCCACCTGGGATCTTGCCAGCGGCGTAGGTCTTTTCCTGGTAGTGAACCGACAGCGGGAAGAAACCCTTGCCTGGATCAGCCTGTTTGGCGCCTACCACAGTCACCAGCACGGTGACGTCGTTGTCGACGGTAACCAGCACGGCGCCGGTTGCCTGACGGGCAATACGGCCCGTTTCGAGAGTGACGGTCGATTGACCGA  >  NC_002947/5355760‑5356058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑