| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,487,141 | C→T | 14.8% | intergenic (+77/‑70) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,487,141 | 0 | C | T | 14.8% | 421.2 / 60.9 | 185 | intergenic (+77/‑70) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base C (79/76); new base T (16/11); total (95/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.84e-02 | |||||||||||
Only 100 of 201 total aligned reads displayed.
TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAA > NC_002947/5486992‑5487290 | cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGGCGGTGAATCCACCATCGTATTcgc < 2:3316131/150‑1 (MQ=37) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGGCGGTGAATCCACCATCGTATTcgc < 2:6860532/150‑1 (MQ=37) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTcgc < 1:3832214/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTcgc < 1:44091/150‑1 (MQ=14) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTcgcg < 1:5745670/150‑1 (MQ=37) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTcgcg < 1:25157/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTcgcg > 2:8364020/1‑150 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGTCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGGGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCTTTCGCgg < 1:1968724/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:149632/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:3802355/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:5322921/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:3809658/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:7540239/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:8340206/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:7049690/150‑1 (MQ=255) gctgctGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTGCCCGCG‑CAAAACATGGGGGATTCACCGCCGCCGTCGCGGGc > 2:8688192/1‑150 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCaa < 2:4499665/150‑1 (MQ=255) gacgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTTCCCCCGCAATA‑GATGGGGGAATGACACCCGCATTAGCGGGCAAGCCCGcg > 2:8589231/1‑149 (MQ=255) gacgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTGGCCCCG‑CATAGGGTGGTGGTGTGACCGCCCCCGGAGCGGGCCAGcccccg > 1:686031/1‑147 (MQ=255) acgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCGTGCCCCCG‑GAAACCAAGGTGGGGTCACCGCCCCAATAGCGGgcccgcccccgc > 2:4790203/1‑146 (MQ=255) tggcgTTGGTATTCACTGGCAGGCGCCACTTCCCCAAATATTTACGCGTATCCCGAGCAAAGTCTAGATC‑CGGTGGGAGCGGGCTTGCCCGCT‑AATACTATGGTGGATACCCCGCCGCATTCGCGGGAAAGCCCGCTCCCACAGTGTTCg < 2:5465089/148‑1 (MQ=255) tCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACg < 2:5944258/150‑1 (MQ=255) cACTGGCTGGCGCCACTCCCCCCACTATTTCCGCGGATCCGGTGCAATGTCGAGATC‑CTGTGGGAGGGGGCTTGCCCGCG‑AATACGTTGGTGGATGCCCCGCCGCTTTCGCGGGAATGCCCGCTCCCACAGTGTTCGGCGCAAGCCACgg < 2:2761080/150‑1 (MQ=255) gcttGCGCCACTTCCCCCACTATTTACGCGGAGCCCGCGCCACGTCGAGATC‑CTGTGGGCGCGGGCTTGCCCGCG‑AATACTTTGGTGGATCCACCGCCGCATTCGGGGGAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCa < 2:2423364/147‑1 (MQ=255) cACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCGCG‑GATACGGTGGTGGGTTGAACCCCCCCGTCGCGGGGAAGCCCCCGCCCACAGGGTTGGGCGCAACCCCCCGGGTCACGTggagc > 2:2187077/1‑146 (MQ=255) ctgccGCAACTATTTCGGCGGAGCCGGCGGCAGGTCGTGCTC‑GTGTGGGCGGGGGGTGGCCGGCT‑AATCCTTTGGTGTATACCCCGCCGCTTGGGGGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:1045567/147‑1 (MQ=255) ttCCGCAAATAATTACGCGTATCCCGAGGAAACTCCATATC‑ATGTGGGAGCGGGCTTGCCCGCG‑AATACTATGTTCTATTAACCGCCGAATTCGCTGGCAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAg < 2:1410216/150‑1 (MQ=255) tcccGCCACTAATTACGGGGACCCCGAGCAATGTCTATATC‑CTGTGGGAGCGGGCTTGCCCGCC‑ATTACGTTGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAg < 2:8623658/148‑1 (MQ=37) tcccGCCACTAATCCCGCGGACCCCGCGCCATGTCTCTACC‑GTGGGGGTGCGGGCGGGCCCCCG‑AACACTTGGGTGTATTCCCCGCCGCATGCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAg < 2:830038/148‑1 (MQ=255) gCCACTAATTCCGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCT‑AATACGTTGGTGTATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGttt < 2:2071378/150‑1 (MQ=255) ccACTATTTCCGGGTTTCCCGTGGCATGTCGTGATC‑CTGGGGGTGGGGGATTGCCCGCT‑ATTACGTGGGTGTATTCACCGCCGCTTTCGCGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 1:7601324/150‑1 (MQ=255) ccACTAATTCCGCGTATCCCGCGGAAAGTCTAGATC‑CTGTGGGAGCGGGCTTGCCCGCT‑AATACGTTGGTGGATAAACCGCCGCATTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:3974726/150‑1 (MQ=37) ccACTAATTACGCGGACCCCGCGGCACGGCGAGATC‑CTGTGGGCGGGGGCTTGCCCGCG‑AATACGAGGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:2864952/150‑1 (MQ=38) aCTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTcg > 1:5056169/1‑87 (MQ=255) aCTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTcg < 2:5056169/87‑1 (MQ=255) ttACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTGCCCGCG‑CATAAGGTGGTGGATTGACAGCCGCAGTAGCGGGGAAGCCCGCACCCCCACTGTTGGGCGCAACCCCCCGGGGAACATGAATAGAGGgtttttaaaga > 2:2155733/1‑143 (MQ=255) aCGGGGAGCCCGCGGCAAGTCGAGTGC‑CTGTGGGAGGGGGCTGGCCGGCG‑AATACGTTGGTTGTTCCCCCGCCGCATGCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:8501605/150‑1 (MQ=255) cgcgTATCCCGAGGCAAGTCGAGAGC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGAGGGTGGATCCCCCGCCGCATTCGGGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAg < 2:7111869/150‑1 (MQ=38) taTCCCGAGGCACGCGTAGATC‑TTGTGGGTGCGGGCTGGCCGGCT‑ATTAGTTTGGTGTATACACCGCCGCATTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:7786258/149‑1 (MQ=255) gtgcccGCGGCAAGTCGAGATC‑GTGTGGGTGCGGGCTTGCCCGCG‑AATAGGTTGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:8767718/147‑1 (MQ=38) gagcccGCGGCACGGCGAGATC‑CGGGGGGAGCGGGCTGGCCCGCG‑AATCCGATGGTGGATGCACCGCCGCATTGGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:7187565/147‑1 (MQ=255) gATCCGGCGGCAAGTCGATATC‑GTGTGGGAGCGGGCTTGCCCGCT‑AATAGTTTGGTGGATTCACCGCCGCTTTCGGGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 1:8389237/150‑1 (MQ=255) gATCCCGAGTCAAGTCGATTTC‑CTGTGTGAGCGGGCTTGCCCGCT‑AATACGATGGTGGATTCACCGCCGCATTCGCGGTCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGtttt < 2:5311025/150‑1 (MQ=255) tCCCGAGCCAAGCCGAGATC‑CTGTGGGAGCGGGCTCCCCCGCT‑AATACGATGTTGCATACACCCCCCCATACGCGGCCAACCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAACTTTTGa < 2:1336967/150‑1 (MQ=255) cGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCGCG‑AAAACGATTGTGGTTTAAACGCCCCCTTCGCGGGCAAGCCCCCTCCCACCGTGTTGGGCGCAACCCACGGGCTCACGTGAATCGAGGGTTTGACATGAAAGgttttgtca > 2:6699595/1‑145 (MQ=255) cggCATGGCGATATC‑CTGTGGGCGCGGGCTTGCCCGCG‑AATACGATGGGGGCTCCCCCGCCGCATTCGCGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatcatc < 2:2695577/149‑1 (MQ=255) cggCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGGGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGatcatc < 2:8242247/149‑1 (MQ=255) ggCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCg < 2:8996042/150‑1 (MQ=255) aGTCGATATC‑GTGTGGGCGGGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAg < 1:9040120/150‑1 (MQ=255) tcgtgtgGGCGGGGGCTGGCCCGCT‑AACCGGCGGGTGTTTCCCCCGCCGCCTGCGGGGGAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGcc < 2:769732/147‑1 (MQ=255) gtgGGCGCGGGCTGGCCCGCG‑AATACGTTGGTGGATACACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:4340556/150‑1 (MQ=255) ggCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcct > 1:8115148/1‑150 (MQ=255) gCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 1:5255702/1‑150 (MQ=255) gCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:4753249/1‑150 (MQ=255) ttGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAGGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:217508/1‑150 (MQ=255) cccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACCTGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 1:6251987/1‑150 (MQ=255) cccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 1:6081923/1‑150 (MQ=255) cccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 2:6725530/1‑150 (MQ=255) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCAGTTGAATCGAGGTTTTGAGATGTAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcgtgg > 2:8852832/1‑150 (MQ=25) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:5449636/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:1481106/1‑150 (MQ=37) ccGCG‑AATGCGGCGGTGAATCCACCATCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:1177548/1‑150 (MQ=37) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:1349288/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:421727/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:2673622/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:874351/1‑150 (MQ=255) ccGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:6683563/1‑150 (MQ=255) cgcg‑AATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:6915759/1‑150 (MQ=37) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:7873371/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4915124/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:765616/1‑150 (MQ=255) gcg‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:765555/1‑150 (MQ=255) cg‑AATACGATGGTGTATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 2:566649/150‑1 (MQ=255) g‑AACACGTTGGTGCTTTCCCCGCCGATTTGGGGGGCATGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCTAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGATCACGCCCTGGCCTGGAAAg < 1:8364020/150‑1 (MQ=255) ctattACGTTGTTGTATCCCCCGCCGCTTTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 1:2808808/146‑1 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc > 1:6481258/1‑150 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCg > 1:34875/1‑150 (MQ=255) gcggcggtgaATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGc > 2:3764540/6‑150 (MQ=38) aCGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTTTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGc > 1:326751/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 1:1451992/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:5130159/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 1:1698933/1‑150 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 1:3072986/82‑1 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt > 2:3072986/1‑82 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 1:7971700/124‑1 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 2:499284/1‑150 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 2:5073003/1‑150 (MQ=255) tggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAc > 2:4186433/1‑150 (MQ=255) gATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAccc > 1:2404380/1‑150 (MQ=255) aatccACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCATGAGCCCGCCCTGGCCTGGACAGTCGCCCAGGAccc > 2:2579004/5‑150 (MQ=255) aTTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCa > 2:5890776/1‑150 (MQ=255) ttCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc > 2:6997564/1‑150 (MQ=255) ccgccgCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGt < 1:6062760/150‑1 (MQ=255) cgccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 2:6756803/1‑150 (MQ=255) cgccgcATGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCActttag < 2:6314272/150‑6 (MQ=255) gccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCg > 2:417258/1‑150 (MQ=255) gccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCg > 2:530883/1‑150 (MQ=255) ccgcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCga > 2:1905048/1‑150 (MQ=255) gcATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCgaga < 2:7316367/150‑1 (MQ=255) cATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGaa > 2:6062436/1‑150 (MQ=255) | TGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCG‑AATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAA > NC_002947/5486992‑5487290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |