Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,508,568 G→C 5.8% intergenic (+57/‑142) PP_4839 → / → cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,508,5680GC 5.8% 394.1 / 7.2 123intergenic (+57/‑142)PP_4839/cycAiron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
Reads supporting (aligned to +/- strand):  ref base G (66/49);  new base C (3/5);  total (69/54)
Fisher's exact test for biased strand distribution p-value = 2.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 126 total aligned reads displayed.

GTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGC  >  NC_002947/5508419‑5508716
                                                                                                                                                     |                                                                                                                                                    
gTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCCCTCCTACGAGGGACcg                                                                                                                                                      >  2:363894/1‑150 (MQ=255)
 tGATGTTCCCGCTGGTGGGGGTGTCGATGGGGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACcgc                                                                                                                                                     <  2:6169727/150‑1 (MQ=255)
    tggtCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGtt                                                                                                                                                  <  2:1069590/147‑1 (MQ=255)
    tggccccGCGGGCGGGGGGGTCGCGGGGGGCGCGGGGGGGGGTGGATAGTTGGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGtt                                                                                                                                                  <  1:3118771/146‑1 (MQ=37)
     gTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGGTg                                                                                                                                                 >  2:3602209/1‑150 (MQ=255)
      ttCCCGCTGGTGGGTGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                                <  2:8586831/150‑1 (MQ=255)
      ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTCCGAGGGACCGCGgtgt                                                                                                                                                >  2:4839456/1‑150 (MQ=255)
      ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                                <  2:4994545/150‑1 (MQ=255)
      ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAACCCCTCCTACGAGGGCCCCCGgtgt                                                                                                                                                >  1:236919/1‑150 (MQ=39)
       tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                               <  2:8445624/150‑1 (MQ=255)
        cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTGGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCAACGAGGGACCGCGTTGTAg                                                                                                                                              >  2:3010381/1‑150 (MQ=255)
          cGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGGTGTTGGa                                                                                                                                            >  2:4047866/1‑150 (MQ=255)
          cGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAACCGCTCCTAAGAGGGTCCGCGTTGtttgt                                                                                                                                            >  1:508518/1‑146 (MQ=255)
           gCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTTCGAGGGACCGCGGTGTAGGAg                                                                                                                                           >  2:8972250/1‑150 (MQ=255)
           gCTGGGGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGTCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTACTTCGAGGGACCGCGTTGTAGGAg                                                                                                                                           >  2:8972046/1‑150 (MQ=255)
            cTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGc                                                                                                                                          <  2:2878193/150‑1 (MQ=255)
             tggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCg                                                                                                                                         <  2:1295160/150‑1 (MQ=255)
              ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGGTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCgg                                                                                                                                        <  2:8832557/150‑1 (MQ=255)
               gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCggg                                                                                                                                       <  2:6048446/150‑1 (MQ=255)
               gtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCggg                                                                                                                                       <  2:8214411/150‑1 (MQ=255)
                tggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGt                                                                                                                                      <  2:1828089/150‑1 (MQ=255)
                    ggTGTCGATGGTGGTGATGTGGGGGGTGGAGAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTAc                                                                                                                                  <  2:7934647/150‑1 (MQ=21)
                          gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGa                                                                                                                            >  2:5960809/1‑150 (MQ=255)
                          gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGGTGTAGGAGCGGGTTTACCCCCGa                                                                                                                            >  1:8313626/1‑150 (MQ=255)
                           aTGGTGGTGTGGGGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCTGCGCTTGAGCCTTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCGCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGaa                                                                                                                           <  2:761735/150‑1 (MQ=18)
                           aTGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGaa                                                                                                                           <  2:8642063/150‑1 (MQ=21)
                            tggtggTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTTCCCGCGAag                                                                                                                          >  2:7475204/1‑150 (MQ=255)
                              gtggggATGTGGGGGGGGGATAGTTGGGTGGTGAGGCGCCGCCGGGCCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGTTTTACCCGCGAagag                                                                                                                        <  2:6919212/150‑1 (MQ=18)
                                     tgtgGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGAAAACACGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTa                                                                                                                 >  2:9040796/1‑150 (MQ=255)
                                       tgGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACa                                                                                                               >  2:3771109/1‑150 (MQ=255)
                                          ggggTGGATCGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCCTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGc                                                                                                            <  2:4516330/150‑1 (MQ=255)
                                           gggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAACCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCg                                                                                                           >  2:5002654/1‑150 (MQ=255)
                                             gtgtATAGTTGGGTGGTGCGGCGCCGCCGGGTGTTGGCCAGGGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTGCGCGGGTAACCCCGCTCCTACGCGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGaa                                                                                                         <  2:1424047/150‑1 (MQ=37)
                                                gATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAACCCCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTAACCCCGAAGAGGCCGGGACAGGCGaaaag                                                                                                      >  1:4356442/1‑148 (MQ=38)
                                                    gTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAGACCCGCTCCTCCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                                  <  2:5691325/150‑1 (MQ=255)
                                                     tttGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGAGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAg                                                                                                 >  1:4424064/1‑150 (MQ=255)
                                                            gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCAACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                          >  2:2068709/1‑150 (MQ=255)
                                                            gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCACCAACGAGGGACCGCGGTGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                          >  2:72896/1‑150 (MQ=255)
                                                                ggCGCGGCCGGGTCTGGGCCAGCTGTTGAGCCTTGTGTTGCCTTTGCTGGCCTCTTCGCGGGTAAACCCGCACCTCCGAGGGACCGGGTTGTCGGAGCGGTTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                                      <  2:1250869/150‑1 (MQ=37)
                                                                ggCGCCCCCGGGACTTGGCCAGCGCTTGACCCTTGTGTTGCCTGTGCTGGCCACTACGCGGGAAAACCCCCTCCAACCAGGCACCGCGTTCAAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                                      <  2:2958582/150‑1 (MQ=37)
                                                                 gcgcCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCag                                                                                     >  2:6076056/1‑150 (MQ=255)
                                                                 gcgcCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAACCCCACCAACGCGGGAACCCGGTGTAGGGGCGGGTTTAACCGCGAAGAGGCCGGTACAGGCGGAATTCGGAGCCCaaaaataag                                                                                     >  1:7819679/1‑145 (MQ=25)
                                                                 gcgcCGCCGGGTCTGGGCCTGGGCTTGCGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTCCGAGGGACCGGGTTGTCGGCGGGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCag                                                                                     <  2:6344964/150‑1 (MQ=37)
                                                                      gccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCgg                                                                                                                                        >  1:5456881/1‑94 (MQ=255)
                                                                      gccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCgg                                                                                                                                        <  2:5456881/94‑1 (MQ=255)
                                                                         gggTTTTGGCCAGGGCTTGAGCCTTTTGTTGCGTGTGCTGGCCTCTGCGCGGGTAAACCCGCTCCTACGCGGGACGGGGTTGTAGGTGGGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATc                                                                             <  2:1115632/150‑1 (MQ=37)
                                                                            tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGTTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGGGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                          <  2:612717/150‑1 (MQ=255)
                                                                               gggCCCGCGCTTGCGCGTGGTGTTGCGTGTGGGGCCCTCTGGGCGGTACAACCCGCCCCACCGCGGGCCGGGGTTGTCGGCGGGGTTTTCCCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTcgc                                                                       <  2:345946/149‑1 (MQ=255)
                                                                               gggCCAGCGCGTGCGCCTTGGGTTGCCTGTGGTGGCCTCTTCGCGGGTACACCCGCTCCCACGCGGGAGCGCGTTGTAGGCGGGGGTTGACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTcgc                                                                       <  2:1962755/149‑1 (MQ=255)
                                                                                       gcTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGGAAACCCCCTCCAACGAGGGACCCCGTTGTATGCGCGGGTTTACCCCCGAAGAGGCCGGTACACGCGAAATTCTGATCCGAAAAATCAGAGTCGATAAGTAGCGcccccaa                                                               >  2:2491117/1‑147 (MQ=25)
                                                                                         ttGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                             <  2:2194883/150‑1 (MQ=255)
                                                                                         tggcgCCTTGTGTTGCCTGGGCGGGCCTCTTCGCGGGTAAACCCGCTCCTCCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                             <  2:2194870/146‑1 (MQ=255)
                                                                                              ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCCATCGGGAAc                                                        >  2:1181115/1‑150 (MQ=255)
                                                                                               cTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGAGCAGGAAcg                                                       >  2:2171142/1‑150 (MQ=255)
                                                                                                  gtgtTGCGTGTGGGGGCACCTTGGCGGGTAACCCCGCCCCTACGAGGGCCCGGGTTGTTGGAGGGGTTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                                    <  1:7331090/150‑1 (MQ=255)
                                                                                                        ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTta                                              <  2:5282012/150‑1 (MQ=255)
                                                                                                          tgtgGTGGCCTCTTCGGGGGTAAACCCGCTCCTCCGAGGGACCGGGTTGTAGGAGGGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                            <  2:4020335/150‑1 (MQ=38)
                                                                                                          tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                            >  2:8388668/1‑150 (MQ=255)
                                                                                                          ggtgCGGGCCTCTCGGGGGCAAAACCCGCTCCTCCGTGGCACCGGGTTGTCGGCGGGGGTTCACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                            <  2:2276002/149‑1 (MQ=255)
                                                                                                               tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGGACGCGCGTGTtagcctagc                                       >  2:7763184/1‑150 (MQ=255)
                                                                                                                 gCCTCTTCGGGGTTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGGGGTTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCg                                     <  1:3602209/150‑1 (MQ=255)
                                                                                                                  ccTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTTTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCgg                                    <  2:4251707/150‑1 (MQ=255)
                                                                                                                   ctctTCGCGGGTAATCCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGGTGAGCCGAAAATGCAGAGTCGGTCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCggg                                   >  2:575267/1‑149 (MQ=255)
                                                                                                                          cgGGTAAACCCGCTCCTACGCGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACctct                            <  2:538612/150‑1 (MQ=255)
                                                                                                                          cgGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAACGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACctct                            >  1:1453571/1‑150 (MQ=255)
                                                                                                                            ggTAAACCCGCTCCTCCGAGGGACCGCGTTGTCGGAGCGGTTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGa                          <  2:3921534/150‑1 (MQ=255)
                                                                                                                            ggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGa                          >  1:7222230/1‑150 (MQ=255)
                                                                                                                            ggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGa                          <  2:8569112/150‑1 (MQ=255)
                                                                                                                             gTAAACCCGCTCCTACGTGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGAc                         <  2:7819679/150‑1 (MQ=255)
                                                                                                                             gTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGAc                         >  1:5710611/1‑150 (MQ=255)
                                                                                                                                accccGCTCCTACGAGGGCCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaag                      <  2:3963562/148‑1 (MQ=255)
                                                                                                                                 ccccGCCCCTCCGGGGGCCGGCGTGTTCGGTGGGGTTTAACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga                     <  1:3222257/149‑1 (MQ=255)
                                                                                                                                 aCCCGCTCCTACGTGGTACGGCGTTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga                     <  1:3010381/150‑1 (MQ=255)
                                                                                                                                 aCCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGTGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga                     >  1:587466/1‑150 (MQ=255)
                                                                                                                                 aCCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga                     >  1:587084/1‑150 (MQ=255)
                                                                                                                                  cccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaa                    >  2:8336379/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                   >  1:8520210/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                   >  1:4914794/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                   >  1:6919678/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                   >  1:6611704/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                   >  2:3174169/1‑150 (MQ=255)
                                                                                                                                   ccGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAGCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCGCTGACaagaag                   >  1:3809394/1‑150 (MQ=255)
                                                                                                                                    cgatCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGTTGTGGAACGCGCGTGTTAGCCTCGCCGGCTACCTCTGACaagaagg                  >  2:2708682/4‑149 (MQ=255)
                                                                                                                                     gCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGAc                 >  1:1590840/1‑150 (MQ=255)
                                                                                                                                     gCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGAc                 >  1:9120021/1‑150 (MQ=255)
                                                                                                                                       tCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTg               >  1:4162427/1‑150 (MQ=255)
                                                                                                                                       tCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTg               >  1:1263778/1‑150 (MQ=255)
                                                                                                                                         cTACGTGGGACCGCGTTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa             <  1:5245379/150‑1 (MQ=255)
                                                                                                                                         cTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAATAGGCCGGTACAGGCGAAATGATGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTATCCTATCCGGCTACATATGACAATAAGACTGCa             >  2:1812603/1‑150 (MQ=38)
                                                                                                                                          tACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAg            >  2:259113/1‑150 (MQ=255)
                                                                                                                                           aCGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGc           >  2:4990774/1‑150 (MQ=255)
                                                                                                                                               gggACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                                  <  2:3692839/107‑1 (MQ=255)
                                                                                                                                               gggACCGAGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATATTTAGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTAt       >  1:4656382/1‑150 (MQ=255)
                                                                                                                                                ggACCGCGTTGAAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATATGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGAAGCCTATg      >  2:1308075/1‑150 (MQ=255)
                                                                                                                                                 gACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGa     >  1:5406782/1‑150 (MQ=255)
                                                                                                                                                 gACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGa     >  1:5406957/1‑150 (MQ=255)
                                                                                                                                                 gACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGa     >  1:889342/1‑150 (MQ=255)
                                                                                                                                                  aCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                            <  2:6587271/110‑1 (MQ=255)
                                                                                                                                                  aCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                            >  1:6587271/1‑110 (MQ=255)
                                                                                                                                                    cgcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGGTCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGc  >  2:4648541/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGC  >  NC_002947/5508419‑5508716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: