| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,511,866 | A→C | 9.6% | Q32P (CAG→CCG) | urtB → | urea ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,511,866 | 0 | A | C | 9.6% | 646.5 / 5.3 | 291 | Q32P (CAG→CCG) | urtB | urea ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (148/94); new base C (18/17); total (174/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
TGTAGGAGCGGGCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTG > NC_002947/5511717‑5512014 | tgtaggagcgggCTCACCCGCGAAGAATCCAACCCCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCa < 2:2059395‑M2/138‑1 (MQ=255)tgtaggagcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCa < 1:8093576‑M2/138‑1 (MQ=255)tgtaggagcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCa < 2:5222263‑M2/138‑1 (MQ=255) gtaggagcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAg < 2:4401175‑M2/139‑1 (MQ=255) gagcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAgccggccg > 1:5607695‑M2/8‑150 (MQ=255) gcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAggccggc > 2:2969761‑M2/6‑150 (MQ=255) gcgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAggccggc > 2:687043‑M2/6‑150 (MQ=255) cgggCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAggccggcc < 1:10861‑M2/146‑1 (MQ=255) gCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGc > 2:8954849‑M2/2‑150 (MQ=255) gCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGc < 1:8643095‑M2/149‑1 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGGATTCTTGCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc > 1:2988009/1‑150 (MQ=255) tCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTc > 2:1161117/1‑150 (MQ=255) aCCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGa > 2:8689967/1‑150 (MQ=255) cccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCggc < 1:2931597/150‑3 (MQ=255) cccGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGaa < 2:5439222/150‑1 (MQ=255) gcgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGc > 2:4743308/1‑150 (MQ=255) gcgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGc > 2:754820/1‑150 (MQ=255) cgAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCt > 2:6517005/1‑150 (MQ=255) cAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGcac < 2:3393412/150‑1 (MQ=255) cAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCGGGgcagccc > 1:6235730/1‑148 (MQ=255) acCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAAcc > 2:3450472/1‑150 (MQ=255) gATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACTCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCGGGGCAGCACAAcccca > 1:8541981/1‑148 (MQ=255) gATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGa < 2:2655026/150‑1 (MQ=255) gATATCCCGGATGGCCCCCATGCTCAGACTCCTGCTCACCCTCCTGCTGCAAATCCCCCTGGCAACCCACGCCAGCGAGGGCGACTTCTTTCTCACCGCCAAGCCCGCCGAGCTGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGa < 1:9079551/150‑1 (MQ=255) ttccccggATTGCCCGCATGCTCACACTCCGGCTCACCCCCCTGCTGCTAACCCCCCTGGCACCCCACGCCAGCGTGGGCTAATTCTTTCTCCCCGCAACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATg < 1:3142657/144‑1 (MQ=255) tCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGcc > 2:862914/1‑150 (MQ=255) ggATTGCCCGCATTCTCATACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCcgcgc < 1:3545623/150‑1 (MQ=255) cccGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGACGGCTGGGCAGCACAACCCCAAGCCCCGCGCCGGc > 1:1814528/1‑150 (MQ=255) cccGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGc > 2:1817128/1‑150 (MQ=255) gCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCgc > 2:4122707/1‑150 (MQ=255) gCTCAGACTCCTGCCCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCACACCGCCACGCCCGCCGAGCAGGCCGGCCCGCGCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCgctgct < 1:4680060/150‑1 (MQ=255) tCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCGGGGCAGCCCAACCCCCAGCCGCGCGCCGGCCGCGGCggg > 1:2427612/1‑150 (MQ=255) cAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCTGGGCCGCCCCACCCCAAGCCGCGCCCCGGCCCCGGCTggt > 1:4952330/1‑149 (MQ=255) aGACCCCTGCCCCCCCTCCTGCTGCTAACCCCCCTCGCAACCCACGCCCGCGTGGGCTTATTCTTTCTCCCCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGaa < 1:3935916/150‑1 (MQ=255) aCTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCGCGAAGGCTGGGCCGCACACCCCCCTGCCGCGCGCCTGCCGCGGCTgggcaa > 1:7676091/1‑146 (MQ=255) cTCCTGCACACCCTCCTGCTGATAATCCCCCGGGCAACCCACGCCAGGGAGGGCGAATTCTTCCACCCCGCCAAGCCGGCCGCGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAAc < 1:7269723/150‑1 (MQ=255) tGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCTGGGTGGGCGATTTCTTTCCCACCGCCACGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTgc < 1:6441242/150‑1 (MQ=255) tGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTgc > 2:7352404/1‑150 (MQ=255) tGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGCAGGCTGGGCAGCACAACCCGATGCCGCGCGCCAGCCGCTGCTGGGAAACCAgc > 1:1660047/1‑150 (MQ=255) tGCACACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTgc < 2:1395537/150‑1 (MQ=255) ggCTCACCCTCCTGCTGCAAACCCCCCTCCCACCCCACGCCAGCGTGGGCGAATTCTTTCTCCCCGCCACGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGTGCCTGCCGCTGCTGGAAAACCTgc < 1:126744/149‑1 (MQ=255) gCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCTCGAAGGCTGGGCCGCCCAACCCGATGCCGCGCGCCTGCCGCTGCTGGGAAACCTgcg > 1:1887537/1‑150 (MQ=255) tCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGCAGGCGGGGCAGCCCACCCCCCTCCCGCGCGCCTGCCGCGGCTGGGAAAACAGCGcc > 1:5587472/1‑150 (MQ=255) tCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCGCGAAGGCTGGGCCGCACAACCCCATGCCGCGCGCCGGCCGCAGCTGGAAAACCAGCGcc > 1:2097194/1‑150 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCTCGAAGGCGGGGGCGCCCCACCCGCGGCCGCGCGCCGGCCGCGGCGGGGAGACCTGCGccca > 1:4262190/1‑148 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa > 2:3839744/1‑150 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa > 2:6274279/1‑150 (MQ=255) aCCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa > 2:6641111/1‑150 (MQ=255) aCCCGCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCCCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCaa < 1:4529149/150‑1 (MQ=255) cctcctGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCGGGCCGGCCGGCGCGAAGGCGGGGCCGCCCCACCCCCAGCCGCGCGCCGGCCGCCGCGGGGAAAAAAGCCCCAAgg > 1:3030949/1‑150 (MQ=255) cctcctGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCGGGGCAGCACAACCCCAAGCCCCGCGCCAGCCGCGGCTGGAAAACCTGCCCCaacg > 1:2619456/1‑148 (MQ=255) cctcctGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTATTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAAACCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAgg > 2:6347669/1‑150 (MQ=255) tgctgcTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCGCGAAGGCTGGGCGGCACAACCCCAAGCCCCGCGCCAGCCGCTGCGGGAAAAACAGCGCCAACGCCGCa > 1:7976241/1‑150 (MQ=255) tgctgcTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGGTCGAATGCGGGGCAGCACAACCCGCAGGCGCGCGCCTCCCGCGGCTCGAAAACCTGCGCCAAGGCCGcc > 1:5238011/1‑149 (MQ=255) gctgctAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGCAGGCTGGGCCGCACAACCCCATGCCGCGCGCCTGCCGCGGCTGGAAAACCAGCGCCAAGGCCGCag > 1:3358432/1‑149 (MQ=255) tgctAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCg > 2:3305110/1‑150 (MQ=255) gctAATCCCCCTGGCACCCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGGGGGGCGGCCTGCTCGACGGCTGGGGAGCCCAACCCGATGCCGCGCGCCGGCCGCTGCGGGAGCACCTGCGCCAACGCCGCATCGc > 1:2282115/1‑150 (MQ=255) aaTCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCCCAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCCAGGCCGCATCGccac > 2:171064/1‑150 (MQ=255) cccccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCTGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCaa < 2:7803895/150‑1 (MQ=255) cccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATg > 2:599983/1‑150 (MQ=255) cccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATg > 2:177686/1‑150 (MQ=255) cccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCCAAGCCGCCCGCCTGCCGCAGCTGGAAAAACAGCGCCAAGGCCGCATCGCCACCaaag > 1:5765093/1‑148 (MQ=255) ccTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGa > 2:4892140/1‑150 (MQ=255) cgggCAACCCACGCCAGCGTGGGCTAATTCTTTCTCACCGCCACGCCCGCCGAGCCGGCCGGCCGGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGAc < 1:4493325/148‑1 (MQ=255) cTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGAc > 1:437022/1‑150 (MQ=255) ggCAACCCACGCCAGCGAGGGCGAATTCTTTCTCCCCGCCACGCCCGCCGCGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACaa < 1:633790/150‑1 (MQ=255) aaCCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAAACCGAAGCCCCGCGCCTGCCGCTGCTGGAAAACCAGCGCCAAGGCCGCAACGCCACCCATCACAAgcg > 1:7853445/1‑150 (MQ=255) ccACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCTGCTCGCAGGCGGGGCCGCCCAACCCCCTGCCGCGCGCCGGCCGCTGCTGGAAAACCTGCGCCACGGCCGCCGCGCCACCAATGACAAGCGCac > 1:5711075/1‑149 (MQ=255) cACGCCAGCGTGGGAGAATTCTTTCTCACCGCCAAGCCCGCCTAGCTGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAg < 1:6774340/150‑1 (MQ=255) cACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAg > 2:3215411/1‑150 (MQ=255) cgagagggAGGGCTATTTCTTGCTCACCTCCCCGCCCGGCGTGCCGGCGGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGt < 1:5482267/143‑1 (MQ=255) cGCCAGGGAGGTCTATTTCTTTCTCACCGCCACGCCCGCCGCGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGt < 1:142582/150‑1 (MQ=255) aGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTgcgc < 2:1836488/150‑1 (MQ=255) gggCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGaa < 2:9002683/150‑1 (MQ=255) gggCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCTGGGCAGCACAACCCCAAGCCGCGCGCCGGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCAACGCCACCAAAGACAAACCCAAGGGTCGCCGGaa > 1:8698430/1‑150 (MQ=255) gAATTCTTTCTCACCGCCAAGCCCGCCGAGCCGGCCGGCCGGCGCGAAGGCTGGGCCGCCCAACCCGAAGCCGCGCGCCGGCCGCTGCTGGAAAACCTGCGCCAAGGCCCCCTCGCCACCAATGACAAGAGCAAGGTGCGCCAGaacaac > 1:6505177/1‑150 (MQ=255) gAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACCACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCAGaacaac > 2:5658129/1‑150 (MQ=255) aaTTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAATCGCAAGGTGCGCCTGAACAAcc > 2:3723566/1‑150 (MQ=255) tttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCCATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTg > 2:2424331/1‑150 (MQ=255) tttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTg < 2:843712/150‑1 (MQ=255) tttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCGCGAAGGCTGGGCAGCACAACCCCAAGCCCCCCGCCTGCCGCTGCTGGAAAAACTGCGCCAAGGCCGCATCGCCACCCAAGACAAGCGCCAGGGGCGCCTGAACAAACGccag > 1:7024466/1‑148 (MQ=255) tttctCACCGCCAAGCCCGCCGAGCAGGCCGGCCAGCTCGAAGGCGGGGCAGCACAACCCCAAGCCCCGCGCCAGCCGCTGCAGGAAAACCTGCGCCAAGCCCGCAACGCCACCAAAGACAAGCGCAAGGTGCGCCAGAACAACCGccag > 1:4124933/1‑148 (MQ=255) cccACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTgcgc < 1:6095242/148‑1 (MQ=255) tcACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGAAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGcgcg > 2:6803679/1‑150 (MQ=255) cACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACCAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCgg < 2:961227/150‑1 (MQ=255) aCCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGc < 2:5099919/150‑1 (MQ=255) ccGCCACGCCCGCCGAGCAGGCCGGCCGGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGcc < 1:754820/150‑1 (MQ=255) ccGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGcc < 2:4601674/150‑1 (MQ=255) cGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCt < 2:8829742/150‑1 (MQ=255) cacgCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGAt < 1:687043/147‑1 (MQ=255) gCCCGCCGCGCCGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGCTGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACCAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGa < 2:8152557/150‑1 (MQ=255) cccGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGAc < 1:8999628/150‑1 (MQ=255) cgccgAGCAGGCCGGCCAGCTCGAAGGCTGGGCAGCACAACCCGATTCCGCGCGCCTGCCGCTGCTGGAAAAACTGCGCCAAGGCCGCATAGCCACCAATGAAAACCGCAAGGTGCGCCTGAACAACCGCCAGCGCGGCCTGATCGACac > 1:4818242/1‑149 (MQ=255) ttcgAGCAGGCCGGCCTGCTCGGAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAAc > 2:2179546/3‑150 (MQ=255) ttcgAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAATCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAAc > 1:8277580/3‑150 (MQ=255) ttcgAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAAc > 2:725004/3‑150 (MQ=255) ttcgAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAAc > 2:5280747/3‑150 (MQ=255) gccgAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCCTCGCCCCCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACCAc > 2:6461218/1‑150 (MQ=255) gAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGcc > 1:983245/1‑150 (MQ=255) aGCAGGCCGGCCTGCTCGGAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGccc > 2:5765350/1‑150 (MQ=255) | TGTAGGAGCGGGCTCACCCGCGAAGAATCCAACACCGATTTCCAGGATTGCCCGCATGCTCAGACTCCTGCTCACCCTCCTGCTGCTAATCCCCCTGGCAACCCACGCCAGCGAGGGCGAATTCTTTCTCACCGCCAAGCCCGCCGAGCAGGCCGGCCTGCTCGAAGGCTGGGCAGCACAACCCGATGCCGCGCGCCTGCCGCTGCTGGAAAACCTGCGCCAAGGCCGCATCGCCACCAATGACAAGCGCAAGGTGCGCCTGAACAACCGCCTGCGCGGCCTGATCGACAACGCCCTG > NC_002947/5511717‑5512014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |