| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,531,330 | C→G | 5.3% | intergenic (‑574/+20) | ydfG ← / ← livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,531,330 | 0 | C | G | 5.3% | 828.7 / 25.9 | 246 | intergenic (‑574/+20) | ydfG/livF‑II | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (111/122); new base G (9/4); total (120/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 | |||||||||||
Only 100 of 280 total aligned reads displayed.
TTGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCG > NC_002947/5531181‑5531479 | ttGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcac < 1:4914422/150‑1 (MQ=255) gAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactg > 1:2213764/1‑150 (MQ=255) aGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgc < 1:8238388/150‑1 (MQ=255) gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACGCTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 1:7968324/150‑1 (MQ=255) gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 2:5977705/150‑1 (MQ=255) gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 1:5542010/150‑1 (MQ=255) gCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGctgcactgca < 2:5577466/150‑1 (MQ=255) atatGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcc < 2:7045982/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc < 1:8099995/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCAGTGCAGcccc < 1:5975271/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:7838810/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:5665613/150‑1 (MQ=255) atGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 1:5207428/150‑1 (MQ=255) tGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAACTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCt < 2:9003588/150‑1 (MQ=255) gCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCtt > 2:8588498/1‑150 (MQ=255) ccaccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTa < 2:6382169/150‑1 (MQ=255) caccaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTaa > 1:3012789/1‑150 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc < 2:6273117/145‑1 (MQ=255) accaTGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGcccc > 1:6273117/1‑145 (MQ=255) tGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCtttctcaat < 1:1738897/150‑8 (MQ=255) ttttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACt > 1:3196707/1‑150 (MQ=255) tttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTc > 2:3946727/1‑150 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 1:4849462/150‑1 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 1:5105910/150‑1 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 2:4517411/150‑1 (MQ=255) ttCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCa < 1:3473015/150‑1 (MQ=255) ccACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGt < 2:6153673/150‑1 (MQ=255) ccACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGt < 1:2985877/150‑1 (MQ=255) cacaGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTg > 2:7576103/1‑150 (MQ=255) aGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgccc < 2:4693996/150‑1 (MQ=255) gcggcTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTgcccgc > 1:3394423/1‑150 (MQ=255) gcTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCa < 2:8485150/150‑1 (MQ=255) tCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGa > 1:5806472/1‑150 (MQ=255) cacaCTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATa > 2:5006285/1‑150 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATaa < 1:7237709/150‑1 (MQ=255) acacTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACACAGTGCCCGCCCAGATaa > 1:7763265/1‑150 (MQ=255) acTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGc < 1:752196/150‑1 (MQ=255) tATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGt < 1:6697696/150‑1 (MQ=255) tCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTa > 1:9147497/1‑150 (MQ=255) gAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACt < 2:1602128/150‑1 (MQ=255) aaaaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACtt > 2:202847/1‑150 (MQ=255) aaaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTc > 1:1211209/1‑150 (MQ=255) aaaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTc < 1:5147625/150‑1 (MQ=255) aaaGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTc < 2:7296578/150‑1 (MQ=255) gagTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTc < 1:2838221/150‑1 (MQ=255) gTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTTCACAGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAt > 1:1027805/1‑150 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGACTATGGGTGTGTTTCGGGAGAAGGGAACGACACGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAtt > 2:5449811/1‑150 (MQ=255) ttGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACGTCCTCAtt > 1:7700799/1‑150 (MQ=255) ttGGCCTGTCGAAACAATGGCTAGCGAAGGAATAAGGGAGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCAtt < 2:6144360/150‑1 (MQ=255) gCCTGTGGAAACTATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGTAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc < 2:3012369/150‑1 (MQ=255) gCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAc > 2:7780939/1‑150 (MQ=255) ccTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGAcc > 2:6766769/1‑150 (MQ=255) gtgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAAc > 2:7827268/1‑150 (MQ=255) tgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACa < 1:3926843/150‑1 (MQ=255) tgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACa < 1:7229507/150‑1 (MQ=255) tgGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACa < 1:8192364/150‑1 (MQ=255) aaCAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTc > 1:1599402/1‑150 (MQ=255) aaCAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTc < 2:5322598/150‑1 (MQ=255) cAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCt < 2:128495/150‑1 (MQ=255) aaTGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTg > 1:6539724/1‑150 (MQ=255) ttGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAAAAGTTCCTGcccggt > 1:4187165/1‑150 (MQ=255) gCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcc < 1:351484/150‑1 (MQ=255) cGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtccc < 1:8049637/150‑1 (MQ=255) cGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtccc > 1:7460481/1‑150 (MQ=255) gAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccg < 2:6647528/150‑1 (MQ=255) gAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccg < 1:6941967/150‑1 (MQ=255) aGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGcccggtcccggt < 2:7125078/150‑1 (MQ=255) gAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTAAGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCa > 2:6865522/1‑150 (MQ=255) atatGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATg < 1:6580001/150‑1 (MQ=255) tgtgTCGGGTGAAGGGAACGACAAGTTTTCCACAGTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACACCTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATGGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGc < 2:6928215/150‑1 (MQ=255) gtTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGcc > 2:2636478/1‑150 (MQ=255) agaAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGAcc < 2:2330636/150‑1 (MQ=255) aaGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCAt > 2:4803579/1‑150 (MQ=255) aGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGGTGACCATc > 2:3472616/1‑150 (MQ=255) gAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACAGCAGCCCCTTAACACAAATCAGTGCCCCCCCAGAAAAGCGTTACGCACATCCACATTTACCAAAAGTTAATGACCCGTCCCCGTCATGCCAAAATGCCCGTTGACCAAcaca > 1:7869642/1‑150 (MQ=255) gACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAgg > 2:1226972/1‑150 (MQ=255) ttttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGt < 2:9147497/150‑1 (MQ=255) tttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTc < 2:5259582/150‑1 (MQ=255) ttCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTcc < 2:3168555/150‑1 (MQ=255) ccACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGa < 2:3812990/150‑1 (MQ=255) cacaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGAc > 1:2099465/1‑150 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCCGATAAGCGTTAAGCACTTCCACAATTAACAACAGTTCCAGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGTCCATCACAAAGGCCCGGTCCGACa > 1:2305530/1‑150 (MQ=255) acaTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACa > 1:4421016/1‑150 (MQ=255) aTTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGt < 2:2840583/150‑1 (MQ=255) gttaaggggCTGCAGTGCAGCCCCCTAACACAACTCTGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCa > 2:406886/6‑150 (MQ=255) ttaaggggCTGCAGTGCAGCCCCCTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAg > 1:9011105/5‑150 (MQ=255) gggggCTGCACTGCGGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAgcgc > 2:3626341/1‑150 (MQ=255) aggggCTGCAGTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAgcgc > 1:865548/2‑150 (MQ=255) gggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCAt < 1:2438256/150‑1 (MQ=255) gggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCAt < 1:8149693/150‑1 (MQ=255) gggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCAt < 1:6954802/150‑1 (MQ=255) ggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATg < 1:2182735/150‑1 (MQ=255) ggCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATg < 1:6815976/150‑1 (MQ=255) gCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATgg < 2:633559/150‑1 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt < 2:2373893/150‑1 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt > 2:4567355/1‑150 (MQ=255) tgcactgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGtt < 2:6048040/150‑1 (MQ=255) actgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGc < 2:7348307/150‑1 (MQ=255) actgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGc < 2:6539724/150‑1 (MQ=255) ctgcaGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCGCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCg < 2:3286584/150‑1 (MQ=255) | TTGAGCGATATGCCACCATGTTTTCCACAGGCGGCTCCACACTATCCGTGGAAAAGAGTTGGCCTGTGGAAACAATGGCTTGCGAAGGAATATGGGTGTGTTTCGGGAGAAGGGAACGACAAGTTTTCCACATTGAGAAGGGGGCTGCACTGCAGCCCCTTAACACAACTCAGTGCCCGCCCAGATAAGCGTTACGCACTTCCTCATTGACCAACAGTTCCTGCCCGGTCCCGGTCATGCGAATCTGCCCGTTGACCATCACATAGGCCCGGTCCGACAGTTTCAGCGCATGGTTGGCG > NC_002947/5531181‑5531479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |