Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,539,037 A→G 10.8% intergenic (+44/+59) nadE → / ← PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,539,0370AG10.8% 427.0 / 25.1 159intergenic (+44/+59)nadE/PP_4870NH(3)‑dependent NAD(+) synthetase/azurin
Reads supporting (aligned to +/- strand):  ref base A (59/78);  new base G (5/11);  total (70/89)
Fisher's exact test for biased strand distribution p-value = 4.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 167 total aligned reads displayed.

CGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAA  >  NC_002947/5538888‑5539186
                                                                                                                                                     |                                                                                                                                                     
 gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                      <  2:2841191/150‑1 (MQ=255)
 gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                      <  2:5429403/150‑1 (MQ=255)
 gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCCCAAACGCGGGGGaa                                                                                                                                                      >  2:4578694/1‑150 (MQ=255)
       ttCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCAcc                                                                                                                                                >  1:7558496/1‑150 (MQ=255)
       ttCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTAACCCGCGCATACGAGGGGGGACCCAcc                                                                                                                                                >  1:2884844/1‑150 (MQ=255)
        tCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGTGAAcccgctc                                                                                                                                               <  2:8793043/150‑5 (MQ=255)
           tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGCAGACGCGGGTGAACCCACCGACg                                                                                                                                            >  2:5447339/1‑150 (MQ=255)
           tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACCGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGa                                                                                                                                              <  1:7424581/148‑1 (MQ=255)
           tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACAGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGa                                                                                                                                              >  2:7424581/1‑148 (MQ=255)
            gCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGc                                                                                                                                           <  1:6682951/150‑1 (MQ=255)
            gCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCAGCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGc                                                                                                                                           <  1:8004339/150‑1 (MQ=255)
             cATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCGTGATACGTGGCCTGCAGGAGCGGGGTCACCCGCCCAAACGAGGGGGAAcccccccccccc                                                                                                                                          >  2:8626466/1‑144 (MQ=255)
                  gCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGCAAACGAGGGTGAACCCACCCACGCCTTcgc                                                                                                                                     >  2:7941206/1‑150 (MQ=255)
                   cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                                    <  2:824247/150‑1 (MQ=255)
                    cgCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:3024540/149‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  1:4752405/150‑1 (MQ=25)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  1:7589429/150‑1 (MQ=25)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:8769025/150‑1 (MQ=25)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                   <  2:1391026/150‑1 (MQ=25)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:712816/150‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  2:5952160/150‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  2:3388266/150‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  2:3312285/150‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:7556905/150‑1 (MQ=255)
                    aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCAACGACGCATTCGCgg                                                                                                                                   >  1:4492577/1‑150 (MQ=255)
                    aGCCGGTGGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                                   <  1:3487603/150‑1 (MQ=255)
                     gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  <  1:1185038/150‑1 (MQ=255)
                     gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  <  2:7109366/150‑1 (MQ=255)
                     gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTAAACCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                                  >  2:3539560/1‑150 (MQ=255)
                       cGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTg                                                                                                                                <  2:7387714/150‑1 (MQ=25)
                       cGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTGACCCCCCCAAAAGAGGGTTGAACCACCCCCCCAATCGCggggg                                                                                                                                >  1:2746584/1‑148 (MQ=255)
                              ccAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGc                                                                                                                         <  2:189846/150‑1 (MQ=255)
                               cAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGTACCCACCCACGCATTAGCCGGTGAACCCGcg                                                                                                                        >  2:8440776/1‑149 (MQ=255)
                               cAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACCAGGGTGAACCCACCGACGCATTCGCGGGTGAAACCGcg                                                                                                                        >  2:8441706/1‑149 (MQ=255)
                                   cAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGCGAAccctgcagga                                                                                                                    <  2:3167950/150‑8 (MQ=255)
                                      cGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTAACCCGCCCAAAAGAGGGTGAACCCACCCACGCATTCGCGGGTGAACCCCCGCcagcag                                                                                                                 >  1:6708695/1‑150 (MQ=255)
                                       gTTCGACATCATCGTCGCCACCTCCCGCAAGACCCCGCCAAGGGGCGAAGGGCCGTTCGGTCCTTTATAAGGGGCCTGCAGGCGGGGTTTCACCCGCGAATACGTGGTTGAACCCACCGACGATTTCGGGGTTGAACCCGCTCCTGCAgg                                                                                                                <  2:1843483/150‑1 (MQ=255)
                                       gTTCGACATCATCGTCGCCACCTACCGCAACCCCCAGCACACGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGTTTCACCGGCTAATACGTGGTTGAACCCACCGACGAATGCGCGGGTGAACCCGCTCCTGCAgg                                                                                                                <  2:6442561/150‑1 (MQ=255)
                                            acaaaatcGTCCCCACCTCCCCCAAGACCCAGCACACGCGCTATCTGCCGTTGGCTCCTTTATAAGTGGCCTGCCGGCGGGGGTACACCCGCGAATCCGAGGGTCAACCCACCGCCGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTca                                                                                                           <  2:3886171/145‑2 (MQ=255)
                                                catcGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAAAAGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCAGCAGGGTTCGCCGt                                                                                                       >  2:2973607/1‑150 (MQ=255)
                                                 atcGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCCAATAAGAGGGTGAAACCACCCACGCAGTCGCGGGTGAACCCGCGCCGGCAGGGTTCGCCggc                                                                                                      >  2:890507/1‑148 (MQ=255)
                                                       gCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATACGTGGCCTGCAGGCGGGGTTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGCGGGTTAACCCGCTCCTGCAGGGTTCGCCGTCAGCCtt                                                                                                <  2:3590984/150‑1 (MQ=255)
                                                          aCCTACCGCAACACCCAGCACACCCGCGACGTGCCGGTCGCTCCTTGATACGTGGCCTGCTGGAGCGGGTTCACCCGCGAATACGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGa                                                                                             <  2:7313507/150‑1 (MQ=37)
                                                            cacccGCAAGCCCCCGCACACGCGCCAACTGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGCGCGGGTTCACCGGCTAATACGTGGGTTAACCCACCGACGAATTGGCGGGTTAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGAtt                                                                                           <  1:6595045/147‑1 (MQ=255)
                                                               ccGCAAGACCCAGCAAACGCGCTAACTGCCGTGCGCTCCTTTATATGTGGCCGGCTGGAGCGGGTTCACCCGCGAATACGCGGGTGAACCCACCGACGCTTTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACt                                                                                        <  1:6019357/150‑1 (MQ=38)
                                                                  cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTAGCCGTCAGCCGTTGATTACttta                                                                                     >  2:1997761/1‑148 (MQ=255)
                                                                  cAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATAAGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGGTTACGTGa                                                                                     >  2:6816512/1‑150 (MQ=255)
                                                                        cccgCACACGCGCTAACTGCCGTGCGCTCCTTGATATGTGGCCTGCTGGAGCGGGTTCACCCGCTAATAGGTGGGTGAACCCACCGACGCTTTCGCGGTTTAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGa                                                                               <  1:1316083/147‑1 (MQ=255)
                                                                         cAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCCCATACGAGGGTGAACCCACCGACGCATTCGCCGGTGAACCCGCTCCGGCAGGGTTCGCCGTCAGCCGTTGGGTACTTGGCGCTggc                                                                              >  2:6604980/1‑148 (MQ=255)
                                                                          aGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGCATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCCGGGTTCGCCGTCAGCCTTTGATTACGTGACGATGAcc                                                                             >  2:6069496/1‑150 (MQ=255)
                                                                            cacaAGCGCTAACTGCCTTTCGCTCCTTTATATGTGCCCTGCTGGAGCGGGTTCACCCGCGAATACGTGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                           <  2:4163854/150‑1 (MQ=38)
                                                                             acaAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGGACCCCCCGACGCATTCGCGGGTGAACCCGCGCCTGCAGGGTTCGCCGGCAGCCGTTGTTTACTTGACGATGTCCATg                                                                          >  2:3643663/1‑150 (MQ=38)
                                                                                cgcgcGAACTGCCGTTCGCTCCTGGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCt                                                                       <  2:524293/149‑1 (MQ=255)
                                                                                   gcgAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCCGATACGAGGGGGTACCCACCCACGCCATCGCGGGTGAACCCGCTCCGGCGGGGGTCGCCGGCAGCCGTTGATTACTTGACGATGACCAAGCCTTtc                                                                    >  2:4983337/1‑150 (MQ=255)
                                                                                         tGCCTTTCGCCCCTTGTTAAGGGGCCTGCAGGAGGGGTTTCACCCGCGAATCCGCGGGTTAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCatcatc                                                              <  2:7644954/150‑1 (MQ=37)
                                                                                         tGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTAACCCGCGAATACCAGGGGGAACCCACCCCCGCATTCGCCGGTGAAACCCCACCGGCAGGGGTCGCCGGCAGCCTTTGTTTACTTGACGATGACCGTGACGTtcaacaac                                                              >  2:2777443/1‑148 (MQ=255)
                                                                                          gCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCg                                                             <  2:2135342/150‑1 (MQ=255)
                                                                                             gTTCGCTCCTTGATATGTGGCCTGCAGGTGGGGGTTCACCCGCGAATACGAGGGTTAACCCACCGCCGCTTTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCgaga                                                          <  2:948958/150‑1 (MQ=255)
                                                                                              ttCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGAt                                                         <  2:6302419/150‑1 (MQ=255)
                                                                                              ttCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAAAAGAGGGTGAACCCCCCGACGCATTAGCGGGTGAACCCGCGACTGCAGGGTTCGCCGTCCGCCTTTGAGTACTTGACGGTGACCATTCCTTTCATCATCgagct                                                         >  2:5887024/1‑148 (MQ=255)
                                                                                              ttCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCAACCCCCAAAACGAGGGTGAACCCACCCACGCATTCCCGGGTGAACCCCCTCCAGCCGGGTTCGCCGGCAGCCGTTGATTACGTGACGATGACCATTGCTTTCATAATAgagag                                                         >  2:5887325/1‑149 (MQ=255)
                                                                                               tCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCTAATACGTGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGAtg                                                        <  2:692254/150‑1 (MQ=255)
                                                                                                cGCCCCTTTATATGTGGCCTGCAGGCGGGGGTACACCCGCTAATACTCGGGTGACCCCACCGCCGCTTGCGGGGGGCAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGAtgt                                                       <  1:5540042/150‑1 (MQ=255)
                                                                                                 gCTCATTTATACGTGGCCTGCTGGCGCGGTTTCACCCGCGAACACGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGAtgtg                                                      <  1:2154413/150‑1 (MQ=38)
                                                                                                         ttacgTGGCCGGCAGGTGGGGGTTCACCCGCGAATACGCGGGTGACCCCACGGACGCATTCGCGGTTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGa                                              <  1:7219684/146‑1 (MQ=255)
                                                                                                           atggggCCTTCAGGCGGGGGTCCACCCGCTAACCCGTGGGTGACCCCCCCGCCGCTTTGGGGGGTTCCCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAg                                            <  1:1913134/146‑1 (MQ=255)
                                                                                                             gTGGCCTGCTGGCGGGGGTCCCCCCGCGAATCGGTGGGTCACCCCACCGACGCATTCGCGGGGGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGt                                          <  1:7070220/150‑1 (MQ=255)
                                                                                                                    gCAGGAGCGGGTTCACCCGCGACTACGAGGGTGAACCCACCTACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGTTGTGGCCCGTGAAGGTGCagaag                                   <  2:8208449/150‑1 (MQ=255)
                                                                                                                       ggggggggTCCACCCGCCAATCCGGGGGGGACCCCCCCGCCGCCTGGGCGGGGGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGaagaag                                <  1:934900/145‑1 (MQ=255)
                                                                                                                       ggAGCGGGTCCACCCGCTAATACGTGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGaagaag                                <  2:5669483/150‑1 (MQ=255)
                                                                                                                         aGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCt                              <  2:3691294/150‑1 (MQ=255)
                                                                                                                            ggtttCCCCCGCGAATACGAGGGTGACCCCACCGACTCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                           <  2:4347780/147‑1 (MQ=255)
                                                                                                                             ggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                          <  2:7538183/150‑1 (MQ=255)
                                                                                                                             ggTCCACCCGCCAACACGCGGGTAACCCCACCGACGCTTTCGGGGGTCACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                          <  1:2554060/150‑1 (MQ=255)
                                                                                                                              gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                         >  2:5523739/1‑150 (MQ=255)
                                                                                                                              gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                         >  1:6736379/1‑150 (MQ=255)
                                                                                                                               ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc                        >  2:6576258/1‑150 (MQ=255)
                                                                                                                                  aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                     >  1:4817870/1‑150 (MQ=255)
                                                                                                                                  aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                     >  1:4817453/1‑150 (MQ=255)
                                                                                                                                  aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                     >  2:4361510/1‑150 (MQ=255)
                                                                                                                                   cccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacca                    >  1:4320331/1‑150 (MQ=255)
                                                                                                                                    ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:513512/1‑150 (MQ=255)
                                                                                                                                    ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  2:2488770/1‑150 (MQ=255)
                                                                                                                                    ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  1:6905036/1‑150 (MQ=255)
                                                                                                                                    ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  2:5518922/1‑150 (MQ=255)
                                                                                                                                    ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  2:5095699/1‑150 (MQ=255)
                                                                                                                                    ccGCGAAGACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCCTCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac                   >  2:4568590/1‑150 (MQ=255)
                                                                                                                                     cgcgAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCaccacc                  >  2:806786/1‑150 (MQ=255)
                                                                                                                                     cgcgAATACGAGGGTGAACCCACCGACGCATT‑‑CGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCgg                >  2:3515685/1‑150 (MQ=255)
                                                                                                                                      gcgAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCg                 >  1:7708810/1‑150 (MQ=255)
                                                                                                                                           tACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTc            >  1:8827746/1‑150 (MQ=255)
                                                                                                                                           tACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTc            >  1:2422468/1‑150 (MQ=255)
                                                                                                                                           tACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTc            >  1:1934815/1‑150 (MQ=255)
                                                                                                                                              gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  2:5754963/1‑150 (MQ=255)
                                                                                                                                              gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  2:5931935/1‑150 (MQ=255)
                                                                                                                                              gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg         >  1:5631245/1‑150 (MQ=255)
                                                                                                                                                 ggTGAACCCACCGACGCATTCGCGGTTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCtt      <  2:4301470/150‑1 (MQ=255)
                                                                                                                                                  ctcaaCCCACCCACTAATGCGCGGGACAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTg     <  1:2503261/147‑1 (MQ=255)
                                                                                                                                                    gAACCCACCGACGCTTTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGa   <  2:1377215/150‑1 (MQ=255)
                                                                                                                                                     aaCCCACCGACTCAGTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGaa  <  2:175837/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAA  >  NC_002947/5538888‑5539186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: