| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,540,541 | G→C | 5.5% | intergenic (+61/+60) | PP_4871 → / ← PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,540,541 | 0 | G | C | 5.5% | 785.4 / 25.0 | 236 | intergenic (+61/+60) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (126/97); new base C (7/6); total (133/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
Only 100 of 239 total aligned reads displayed.
TGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACG > NC_002947/5540392‑5540690 | tgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAgg < 1:5184548/150‑1 (MQ=255)tgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAgg < 1:828564/150‑1 (MQ=255) agcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgg < 1:191857/150‑1 (MQ=255) gcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATggg > 1:1117019/1‑150 (MQ=255) gcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATggg > 2:8083241/1‑150 (MQ=255) cagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgggg < 1:3893590/150‑1 (MQ=255) cagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgggg < 2:8331220/150‑1 (MQ=255) gcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa > 2:3709112/1‑150 (MQ=255) cGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGc < 1:5477520/150‑1 (MQ=255) ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCg > 2:4913569/1‑150 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCCCATTGCCTGTGTGGGAGCGGc < 2:4900226/150‑1 (MQ=38) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 1:2168918/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:2952293/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:5453833/150‑1 (MQ=255) cGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGcc < 1:6638035/150‑1 (MQ=255) cGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGcc < 2:2162469/150‑1 (MQ=255) gAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCt > 1:4373107/1‑150 (MQ=255) gctgctGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTTGCAG‑CCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTtgt < 2:7791393/150‑1 (MQ=21) gctgctGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtg < 2:456627/150‑1 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAATCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg > 2:5309841/1‑150 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg > 1:4215834/1‑150 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg < 2:5946092/150‑1 (MQ=255) ggAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTcgc < 1:7740022/150‑1 (MQ=37) ggAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTcgc > 2:4535964/1‑150 (MQ=255) aaGGGATGGACAGCTTGGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCGGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGa < 2:3308935/150‑1 (MQ=255) gCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAag < 2:4373107/150‑1 (MQ=255) gCTTGGTGGCGCCGGTCGCGCCTACGTGGGTCGACAAGCAGCCTGACTGAAGCTGCGACTTTTGGGACCGCTTCGCGGTCCTTTGGCGACCCAAGGCCGCCCCCACAAAGGCAATGGGGGAGCGGCCTTGTGCCGCGATGGGCTGCAAag < 1:5148516/150‑1 (MQ=255) cTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagc > 1:5658938/1‑150 (MQ=255) tttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACACAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagca > 2:8682415/1‑150 (MQ=255) tttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagca > 2:8185703/1‑150 (MQ=255) ttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagcag > 1:2651876/1‑150 (MQ=255) ggCGCCGGTCGCGCATAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGcccc < 1:8949070/150‑1 (MQ=255) gcgcCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCTTTGCAGcccat < 2:6109733/150‑3 (MQ=255) ccGGGCGCGCCTAAGTGGGTCGACACGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACACGGCCGCTCCCACAATGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATa < 2:1077426/150‑1 (MQ=255) gTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTc < 2:9095338/150‑1 (MQ=255) tCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCg > 2:3741192/1‑150 (MQ=255) gcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGa < 2:5639893/119‑1 (MQ=255) aaGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTa > 2:8521188/1‑150 (MQ=255) aGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGCCACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTaa < 1:6705841/150‑1 (MQ=255) gtggcacGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAc > 1:7315325/7‑150 (MQ=255) gggTCGACAAGCAGCCTGACTGACGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAcgc < 2:3052533/150‑1 (MQ=255) tCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGCTCAGTTAACGCGGa > 2:8610827/1‑150 (MQ=255) cGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGaa < 1:607929/150‑1 (MQ=255) gaaatgcagcCTGACTGAAGCTGAGACTTTTGGGACGGCTGCGCGGTCATTACGCCCCACAAGGCCCCTCCCACAAAGGCAATGGGGGAGCGGCATTGGGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAAt < 1:8640595/145‑1 (MQ=255) aCAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCCACAAAGGCAAAGGGGGAGCGGCCGTGTGTAGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGGTCAGTTAACGCGGAATg > 1:948854/1‑150 (MQ=39) aaGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCtt > 1:4804772/1‑94 (MQ=18) aaGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCATTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGAc < 1:3741192/150‑1 (MQ=255) aaGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCGCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGCTGGGCGGCAAAGCAGCCCCCCTAGTCGCTCAGTTTAAGCGGAATGAc > 1:7695188/1‑150 (MQ=38) cgcagcCTGACTGACGCTGAGACTTTTGGGACCGCTTGGCGGTCCTTTCGCCACACACGGCCGCTCCCACAACGGCATTGGGGGGGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACa < 1:861162/149‑1 (MQ=38) gcagcTTGACTTATGCTGAGAATTTTGGGACCGCTGCGGGTTCTTTTCGCGACCCACGGCCGCTCCCACAACGGATTTGGGGGCGGGGCGTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 1:2529633/150‑1 (MQ=255) gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 2:672189/150‑1 (MQ=255) gcagcCGGACTTAAGCTGAGACTTTTGGCACCGCTCCGCGGTCCTTTCGCGACAAACGGCCGCACCCAAAAAGGCAATGGGGGAGCGGCCTTGTGACGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 1:4913569/150‑1 (MQ=38) gactgaAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:4346516/82‑1 (MQ=255) cTGAGACTATTGGGACCGCTTCGCGGTCCTTTCGCGACACAATGCCGCGCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGATCAGTTAAAGCGGAATGACAGGCAGACCCGGctact > 2:6116403/1‑150 (MQ=38) tGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttctt > 2:8249883/1‑150 (MQ=255) ggagaCTTTTGGGCCCGCTTCGCGGTCCTTTCGCGACACAAGGCCGAACCCAAAACGGCAATGGGGGCGCGGCCTTGGGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttctt < 1:3097344/149‑1 (MQ=255) gaCTTTTGGGACCGCGGCGCGGCCCTTCCGCGACACACGGCCGCTCCCACAACGGCATTGGGGGCGCGGCCTGGGGGCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCttgtt < 1:4281443/150‑1 (MQ=255) aCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCttgttg < 2:5093058/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:5063991/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:6886248/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:6326449/150‑1 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 1:2058540/1‑150 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCACAATAGTCGATCAGTTAAAGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 2:5679369/1‑150 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAAGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGGTAACGCGGAATGACAGGCTGACGCGGCTACTTGTTGcc > 2:1726514/1‑150 (MQ=255) ttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCCATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCCGCCCCAATAGTCGATCAGTTAACGCGGAAAGACAGGCTGACGCGGCTTCTTGTTGCCCt > 1:6358644/1‑150 (MQ=255) ttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCt < 2:4215834/150‑1 (MQ=255) atGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCCACAAAGGCAAAGGGGGAGCGGCCGTGTGTCGCGATGGGCGGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCGTGTTGcccg > 1:2677473/2‑149 (MQ=39) aaaggACCGCGAAGCGGTCCCTTCGCGACACAAGGCCGCACCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGCTGGGCGGCAAAGCAGCCCCAAAAGTCGATCAGTTAACGCGGAAAGACAGGCGGACGCGGCTTCTTGTTGcccg > 1:5876122/4‑149 (MQ=255) aaggACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCGCCCACAAAGGCAATGGGGGAGCGGCCGTGTGGCGCGTTGGGCTGCAAAGCAGCCCCAATAGTCGGTCAGTTAACGCGGAGTGACAGGCTGACGCGGCTTGGTGTTGcccgg > 1:5478838/3‑148 (MQ=255) gACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAAAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGcc > 1:8154827/1‑150 (MQ=255) aCCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAAGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCa > 2:2093331/1‑150 (MQ=255) cgcgGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGGGTCGCGATGGGCTGCCAAGCAGCCCCAATCGTCGAGCCGTTCACGCGGGCTGACAGGCTGACGCGGCTGCGTGTTGCCCGTGCCACCCTTGc > 2:7591980/1‑150 (MQ=255) cgGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTc < 2:7299203/150‑1 (MQ=255) ccttCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCGTGCTCGCctc > 2:4665211/3‑150 (MQ=255) cTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGAGCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCctc > 2:7001205/1‑150 (MQ=255) tttCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAAAGACAGGCTGACGCGGCTTCTTGTTTCCCATGCCACCCTTGCTCGCctct > 1:179466/1‑150 (MQ=255) tCGCCACCCACGGCCGCTCCAAAAATGGCAATGGGGGAGCGGCCTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCttt < 1:1522711/150‑1 (MQ=38) gACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAAGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTgcgc > 1:4713362/1‑150 (MQ=255) acaAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTcc > 1:7933285/1‑150 (MQ=255) acaAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTcc > 1:4018049/1‑150 (MQ=255) caAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCt < 1:6288935/150‑1 (MQ=255) aaGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCtt > 1:8321906/1‑150 (MQ=255) cggCCGCTCCCACAATGGCATTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTg < 1:7713339/149‑1 (MQ=255) aGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTg < 2:3456414/150‑1 (MQ=255) ggCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTgg > 1:552778/1‑150 (MQ=255) ccGCTCCCACAAAGGCAATGGGGGCGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCa < 1:3146081/150‑1 (MQ=255) cGCTCCCACAAAGGCCATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAg > 2:5162706/1‑150 (MQ=255) cGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAg > 2:2010595/1‑150 (MQ=255) gCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGc > 2:5778843/1‑150 (MQ=255) tCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCct > 2:3157649/1‑150 (MQ=255) cccACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctg > 2:3854965/1‑150 (MQ=255) ccACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgc > 2:3889512/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 2:8133126/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:5086286/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg < 2:2663771/150‑1 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:8715741/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:7126474/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 2:8864189/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:8005533/1‑150 (MQ=255) aaaGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGt > 1:3594892/1‑150 (MQ=255) | TGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACG > NC_002947/5540392‑5540690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |