| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,540,543 | A→T | 5.3% | intergenic (+63/+58) | PP_4871 → / ← PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,540,543 | 0 | A | T | 5.3% | 737.3 / 19.5 | 240 | intergenic (+63/+58) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (123/99); new base T (6/7); total (134/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 | |||||||||||
Only 100 of 242 total aligned reads displayed.
GGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCG > NC_002947/5540394‑5540692 | agcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgg < 1:191857/150‑1 (MQ=255) gcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATggg > 1:1117019/1‑150 (MQ=255) gcagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATggg > 2:8083241/1‑150 (MQ=255) cagcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgggg < 2:8331504/150‑1 (MQ=255) gcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa > 2:3709112/1‑150 (MQ=255) cGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGc < 1:5477520/150‑1 (MQ=255) ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCg > 2:4913569/1‑150 (MQ=255) ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCg < 1:7185347/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCCCATTGCCTGTGTGGGAGCGGc < 2:4900226/150‑1 (MQ=38) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 1:7621889/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 1:8563473/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:5453833/150‑1 (MQ=255) aCGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:2952293/150‑1 (MQ=255) cGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGcc < 1:6638035/150‑1 (MQ=255) cGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGcc < 2:2162469/150‑1 (MQ=255) gAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCt < 2:1073816/150‑1 (MQ=255) aGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt < 2:2511240/150‑1 (MQ=255) gctgctGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtg < 2:456627/150‑1 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAATCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg > 2:5309841/1‑150 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg > 1:4215834/1‑150 (MQ=255) tgctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgtg < 2:5946092/150‑1 (MQ=255) tgGAAGGGAGGGACAGCTTTGTGGCGCCGGTCACGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTcg < 2:8197785/150‑1 (MQ=255) ggAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTATGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTcgc < 1:7739785/150‑1 (MQ=37) ggAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTcgc > 2:4535964/1‑150 (MQ=255) aaGGGATGGACAGCTTGGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCGGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGa < 2:3308935/150‑1 (MQ=255) gggACAGCTTTGTGGCGCCGGTCGCGCCTACGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAACGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCt < 2:3148725/149‑1 (MQ=255) gCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAag < 2:4373107/150‑1 (MQ=255) cTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagc > 1:5658938/1‑150 (MQ=255) tttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagca < 2:5184542/150‑1 (MQ=255) tttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagca > 2:8682150/1‑150 (MQ=255) ttGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagcag > 1:2651876/1‑150 (MQ=255) ttGGGGCGCGGGTCGCGCCTATGTGGGTCGACAAGCAGCCTGTCTGAAGCTGATACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACACGGCCGCTCCCACAAAGGCAATGGGGGTGCGGCCTTGTGTCGCGATGGGCTGCAAagcag < 1:8206859/150‑1 (MQ=255) tgtgGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCACAGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAagcagc > 1:7705236/1‑150 (MQ=255) gcgcCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCTTTGCAGcccat < 2:6109933/150‑3 (MQ=255) cgcCGGTCGCACCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCaa < 2:587237/150‑1 (MQ=255) ggTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAAAGt > 1:8771552/1‑150 (MQ=255) tCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCg > 2:3741192/1‑150 (MQ=255) gcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGa < 2:5639893/119‑1 (MQ=255) aaGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTa > 2:8521188/1‑150 (MQ=255) aGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGCCACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTaa < 1:6705841/150‑1 (MQ=255) gggTCGACAAGCAGCCTGACTGACGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAcgc < 2:3052533/150‑1 (MQ=255) gggTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACTAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAcgc < 1:8617735/150‑1 (MQ=255) cGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGaa < 1:607929/150‑1 (MQ=255) aCAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCCACAAAGGCAAAGGGGGAGCGGCCGTGTGTAGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGGTCAGTTAACGCGGAATg > 1:948854/1‑150 (MQ=39) aaGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCATTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGAc < 1:3741192/150‑1 (MQ=255) agcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACa > 1:5513295/1‑150 (MQ=255) gcagcTTGACTTATGCTGAGAATTTTGGGACCGCTGCGGGTTCTTTTCGCGACCCACGGCCGCTCCCACAACGGATTTGGGGGCGGGGCGTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAg < 1:2529633/150‑1 (MQ=255) gactgaAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGc < 2:4346516/82‑1 (MQ=255) tgaAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCgg > 1:2195101/1‑150 (MQ=255) tGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttcgt > 2:3370642/1‑148 (MQ=255) ggagaCTTTTGGGCCCGCTTCGCGGTCCTTTCGCGACACAAGGCCGAACCCAAAACGGCAATGGGGGCGCGGCCTTGGGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGcttctt < 1:3097344/149‑1 (MQ=255) aCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCttgttg < 2:5093058/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:5063991/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:6886248/150‑1 (MQ=255) cTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGc < 2:6326449/150‑1 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 2:787181/1‑150 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 1:2058540/1‑150 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCACAATAGTCGATCAGTTAAAGCGGAATGACAGGCTGACGCGGCTTCTTGTTGcc > 2:5679369/1‑150 (MQ=255) ttttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAAGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGGTAACGCGGAATGACAGGCTGACGCGGCTACTTGTTGcc > 2:1726514/1‑150 (MQ=255) ttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCCATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCCGCCCCAATAGTCGATCAGTTAACGCGGAAAGACAGGCTGACGCGGCTTCTTGTTGCCCt > 1:6358644/1‑150 (MQ=255) ttGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCt < 2:4215834/150‑1 (MQ=255) atGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCACCCACAAAGGCAAAGGGGGAGCGGCCGTGTGTCGCGATGGGCGGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCGTGTTGcccg > 1:2677473/2‑149 (MQ=39) aaaggACCGCGAAGCGGTCCCTTCGCGACACAAGGCCGCACCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGCTGGGCGGCAAAGCAGCCCCAAAAGTCGATCAGTTAACGCGGAAAGACAGGCGGACGCGGCTTCTTGTTGcccg > 1:5876122/4‑149 (MQ=255) aaggACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCGCCCACAAAGGCAATGGGGGAGCGGCCGTGTGGCGCGTTGGGCTGCAAAGCAGCCCCAATAGTCGGTCAGTTAACGCGGAGTGACAGGCTGACGCGGCTTGGTGTTGcccgg > 1:5478838/3‑148 (MQ=255) gACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAAAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGcc > 1:8154827/1‑150 (MQ=255) cGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCAcc < 1:5150356/150‑1 (MQ=255) tCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTg < 2:7483104/150‑1 (MQ=255) cgcgGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGGGTCGCGATGGGCTGCCAAGCAGCCCCAATCGTCGAGCCGTTCACGCGGGCTGACAGGCTGACGCGGCTGCGTGTTGCCCGTGCCACCCTTGc > 2:7591980/1‑150 (MQ=255) cgGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAAGGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTc < 2:6222375/150‑1 (MQ=255) gTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGc > 1:5123844/1‑150 (MQ=255) ccTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCct < 1:3952264/150‑1 (MQ=255) ccttCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCGTGCTCGCctc > 2:4665211/3‑150 (MQ=255) tttCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCGTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAAAGACAGGCTGACGCGGCTTCTTGTTTCCCATGCCACCCTTGCTCGCctct > 1:179466/1‑150 (MQ=255) tCGCCACCCACGGCCGCTCCAAAAATGGCAATGGGGGAGCGGCCTTGTGCCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCttt < 1:1522711/150‑1 (MQ=38) gACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAAGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTgcgc > 1:4713362/1‑150 (MQ=255) acaAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTcc > 2:8968384/1‑150 (MQ=38) acaAGGCCGCTCCCCCATTGCCTGTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTcc > 1:487353/1‑150 (MQ=38) caAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCt < 1:6288935/150‑1 (MQ=255) aaGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATCGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCtt > 2:8799507/1‑150 (MQ=255) aaGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCtt < 2:2058540/150‑1 (MQ=255) aaGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCtt > 2:686994/1‑150 (MQ=255) ggCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGGGTCGCGATGGGCTGCAAAGCAGCCCCAAAAGTCGATCAGGTAACGCGGAATGACAGGCTGACGCGGCTGCTTGTTGCCCTTGCCACCCTTGCGCGCCGCTTTGCGCTCCTTgg > 1:3374903/1‑150 (MQ=25) gCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGc > 1:4502383/1‑150 (MQ=255) cGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAg > 2:2010595/1‑150 (MQ=255) cGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAg > 2:8253100/1‑150 (MQ=255) gCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGc > 1:7847611/1‑150 (MQ=255) cccACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctg > 2:3854965/1‑150 (MQ=255) ccACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgc > 2:3889512/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 2:7071732/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 2:8133192/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:4260355/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:8005434/1‑150 (MQ=255) acaAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCctgctg > 1:8715741/1‑150 (MQ=255) aaaGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGt > 1:5013340/1‑150 (MQ=255) gCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcg > 1:3863091/1‑150 (MQ=255) cAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcgc > 1:6918807/1‑150 (MQ=255) cAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcgc < 1:4362266/150‑1 (MQ=255) cAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcgc < 1:8324145/150‑1 (MQ=255) cAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcgc < 2:9100138/150‑1 (MQ=255) aaTGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTAcgcg > 1:3183339/1‑150 (MQ=255) | GGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCG > NC_002947/5540394‑5540692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |