BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,615,508	T→A	6.1%	G162G (GGT→GGA)	PP_4933 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,615,508	0	T	A	6.1%	934.1 / 34.2	278	G162G (GGT→GGA)	PP_4933	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (132/129); new base A (4/13); total (136/142)
Fisher's exact test for biased strand distribution p-value = 4.32e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01

Only 100 of 282 total aligned reads displayed.

GCCGTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCACGTTGA  >  NC_002947/5615359‑5615657

 ccGTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTg                                                                                                                                                       <  1:964207/150‑1 (MQ=255)

   gTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGcc                                                                                                                                                     <  1:7334800/150‑1 (MQ=255)

   gTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGcc                                                                                                                                                     >  2:190022/1‑150 (MQ=255)

   gTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCACCGGACTCCGGAGcc                                                                                                                                                     <  2:231862/150‑1 (MQ=255)

   gTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCGTCAACGACACCTGGCTGCCCATCCCCGACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGcc                                                                                                                                                     <  2:1679925/150‑1 (MQ=255)

    tACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGACGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCCGGCACCGGACTCCGGAGcca                                                                                                                                                    <  1:8528765/150‑2 (MQ=255)

    tACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCCGGCACCGGACTCCGGAGcca                                                                                                                                                    <  1:6513017/150‑2 (MQ=255)

     aCAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑Gc                                                                                                                                                  >  2:1386952/1‑150 (MQ=255)

      cAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCa                                                                                                                                                 >  1:2163840/1‑150 (MQ=255)

      cAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGC‑GGCACCGGACTCCGGAGccagca                                                                                                                                                 <  1:6104545/150‑5 (MQ=255)

       aGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCCGGCACCGGACTCCGGAGccagca                                                                                                                                                 <  2:4692604/150‑5 (MQ=255)

        ggAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACg                                                                                                                                               >  2:8202717/1‑150 (MQ=255)

          aaGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGC‑GGCACCGGACTCCGGAGCCAGCACgaa                                                                                                                                             <  2:2925794/150‑3 (MQ=255)

          aaGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGC‑GGCACCGGACTCCGGAGCCAGCACgaa                                                                                                                                             <  1:3717680/150‑3 (MQ=255)

            gTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCg                                                                                                                                           <  1:3481122/150‑1 (MQ=255)

              ggCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGt                                                                                                                                         <  2:2675024/150‑1 (MQ=255)

               gCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTg                                                                                                                                        >  1:6675174/1‑150 (MQ=255)

                 cGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCa                                                                                                                                      >  1:9078975/1‑150 (MQ=255)

                   aggagTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCAtt                                                                                                                                    >  2:523149/1‑150 (MQ=255)

                      agTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCg                                                                                                                                 <  2:956879/150‑1 (MQ=255)

                            tgctgGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAAc                                                                                                                           >  2:5066484/1‑150 (MQ=255)

                             gctgGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACt                                                                                                                          >  2:8636344/1‑150 (MQ=255)

                               tgGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGa                                                                                                                        >  2:3392790/1‑150 (MQ=255)

                                 gAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATg                                                                                                                      >  1:3737993/1‑150 (MQ=255)

                                 gAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATg                                                                                                                      <  1:7860660/150‑1 (MQ=255)

                                 gAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATg                                                                                                                      >  1:5043879/1‑150 (MQ=255)

                                  aaaCCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGc                                                                                                                     <  1:5732425/150‑1 (MQ=255)

                                     ccccGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTAc                                                                                                                  <  2:6840558/150‑1 (MQ=255)

                                      cccGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACt                                                                                                                 <  1:5522416/150‑1 (MQ=255)

                                       ccGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTg                                                                                                                >  2:1862723/1‑150 (MQ=255)

                                        cGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTgg                                                                                                               <  2:3690825/150‑1 (MQ=255)

                                         ggAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGa                                                                                                              <  1:8425760/150‑1 (MQ=255)

                                             ggTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAgcgc                                                                                                          <  1:5086484/150‑1 (MQ=255)

                                              gTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGcc                                                                                                         <  2:6121575/150‑1 (MQ=255)

                                                   cTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACgg                                                                                                    <  1:6594684/150‑1 (MQ=255)

                                                   cTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACgg                                                                                                    <  1:6917410/150‑1 (MQ=255)

                                                      ggcgggcgCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGcc                                                                                                 >  1:443828/1‑150 (MQ=255)

                                                       gcgggcgCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCt                                                                                                <  2:5834566/150‑1 (MQ=255)

                                                        cgggcgCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACCCCCCCCTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTa                                                                                               <  1:522476/150‑1 (MQ=255)

                                                        cgggcgCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTa                                                                                               <  2:3096022/150‑1 (MQ=255)

                                                         gggcgCTTCAACGACTCCTGGCTGGCCATCCCCTACGCCGCCGCCCTTCACTACCGCGAAACTCCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACTCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTAt                                                                                              <  2:3729035/150‑1 (MQ=255)

                                                           gcgcTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTAtgt                                                                                            <  1:5855904/150‑1 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        >  1:1388333/1‑150 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        >  1:1782932/1‑150 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        >  2:4449317/1‑150 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        >  1:2788041/1‑150 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        >  1:8586135/1‑150 (MQ=255)

                                                               ttCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACCGATGCTACTGGAGCGCCCACGGGCCTATGTGCAc                                                                                        <  1:244527/150‑1 (MQ=255)

                                                                 cAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCt                                                                                      >  1:3598766/1‑150 (MQ=255)

                                                                  aaCGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTg                                                                                     >  2:8344173/1‑150 (MQ=255)

                                                                   aCGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGc                                                                                    <  1:389188/150‑1 (MQ=255)

                                                                   aCGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGc                                                                                    >  2:4268992/1‑150 (MQ=255)

                                                                   aCGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGc                                                                                    <  1:4897957/150‑1 (MQ=255)

                                                                      acacCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCa                                                                                 <  1:8802992/150‑1 (MQ=255)

                                                                          cTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGc                                                                             >  1:2196658/1‑150 (MQ=255)

                                                                               tGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGc                                                                        <  1:1460339/150‑1 (MQ=255)

                                                                                 cccATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTa                                                                      <  2:7580876/150‑1 (MQ=255)

                                                                                  ccATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTAc                                                                     >  1:2903416/1‑150 (MQ=255)

                                                                                        ccTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGa                                                               >  1:970006/1‑150 (MQ=255)

                                                                                        ccTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGa                                                               >  2:7175752/1‑150 (MQ=255)

                                                                                        ccTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGa                                                               >  2:7399789/1‑150 (MQ=255)

                                                                                        ccTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCAATGCGGCAAAATGATGCTACTGGAGAGCCCACCGGCCTATGTGCACCTGCCCACCGCTACGCTACAGCTGa                                                               >  2:6410212/1‑150 (MQ=255)

                                                                                             gccgccgccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTAt                                                          <  2:1779787/150‑1 (MQ=255)

                                                                                               cgccgccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGa                                                        <  1:2951688/150‑1 (MQ=255)

                                                                                                gccgccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGAc                                                       >  1:1266818/1‑150 (MQ=255)

                                                                                                  cgccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACAt                                                     <  1:3251817/150‑1 (MQ=255)

                                                                                                  cgccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACAt                                                     >  1:5355089/1‑150 (MQ=255)

                                                                                                   gccCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATg                                                    >  2:7433053/1‑150 (MQ=255)

                                                                                                            tACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCaa                                           <  2:3952138/150‑1 (MQ=255)

                                                                                                            tACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCaa                                           <  1:7150705/150‑1 (MQ=255)

                                                                                                            tACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCaa                                           >  1:6921499/1‑150 (MQ=255)

                                                                                                              ccGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGt                                         <  1:7437619/150‑1 (MQ=255)

                                                                                                                gcgAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGAGCCTTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTCTGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGc                                       >  2:8116703/1‑150 (MQ=255)

                                                                                                                  gAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGccc                                     >  2:3634848/1‑150 (MQ=255)

                                                                                                                    aaCACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCg                                   >  1:4220110/1‑150 (MQ=255)

                                                                                                                     acacCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCgg                                  <  1:6560001/150‑1 (MQ=255)

                                                                                                                        ccccACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGAc                               <  1:2031144/150‑1 (MQ=255)

                                                                                                                          ccACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCTGGACGc                             <  2:5269917/150‑1 (MQ=255)

                                                                                                                          ccACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGc                             >  1:5568083/1‑150 (MQ=255)

                                                                                                                          ccACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGc                             >  2:7956569/1‑150 (MQ=255)

                                                                                                                          ccACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGc                             <  1:7298485/150‑1 (MQ=255)

                                                                                                                           cACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGcc                            >  1:8081799/1‑150 (MQ=255)

                                                                                                                            aCTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCa                           >  2:2144313/1‑150 (MQ=255)

                                                                                                                                 gTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGaaa                      <  2:4501237/150‑1 (MQ=255)

                                                                                                                                  tGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAAc                     >  1:1121316/1‑150 (MQ=255)

                                                                                                                                  tGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAAc                     <  2:4190771/150‑1 (MQ=255)

                                                                                                                                     tGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCa                  <  1:8304137/150‑1 (MQ=255)

                                                                                                                                      ggCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAg                 >  2:2981707/1‑150 (MQ=255)

                                                                                                                                       gCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGc                <  2:5556847/150‑1 (MQ=255)

                                                                                                                                        cTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCt               <  1:8636344/150‑1 (MQ=255)

                                                                                                                                        cTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCt               <  1:2640448/150‑1 (MQ=255)

                                                                                                                                        cTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCt               <  2:903441/150‑1 (MQ=255)

                                                                                                                                         tCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATgc                                                   >  1:4467367/1‑113 (MQ=255)

                                                                                                                                         tCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCtt              >  2:2408416/1‑150 (MQ=255)

                                                                                                                                         tCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCtt              >  1:1992962/1‑150 (MQ=255)

                                                                                                                                             gAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTc          >  1:3088807/1‑150 (MQ=255)

                                                                                                                                                tCCGGTGCC‑GCACGCCCGGTGCATAGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCAc       <  2:6675174/150‑1 (MQ=255)

                                                                                                                                                  gtttGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCACGt     >  1:4311597/4‑150 (MQ=255)

                                                                                                                                                   ggTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCACGtt    <  1:5070762/150‑1 (MQ=255)

                                                                                                                                                    gTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCACGTTg   >  2:7110403/1‑150 (MQ=255)

GCCGTACAGGAAGTGGCCGAGGAGTGCCTGCTGGAAACCCCGGAAGGTTGGCTGGGCGGGCGCTTCAACGACACCTGGCTGCCCATCCCCTACGCCGCCGCCCTGCACTACCGCGAAACACCCCACTTCGTGCTGGCTCCGGAGTCCGGTGCC‑GCACGCCCGGTGCATTGCGGCAAACTGATGCTACTGGAGCGCCCACGGGCCTATGTGCACCTGCCCACCGCTTCGCTACAGCTGATCTATGACATGCGCCTGCAAGTGCCCCGGGACGCCAAGAAACTCAGCTTGTTCCACGTTGA  >  NC_002947/5615359‑5615657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`